Ggra9537.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9537.t1
Unique NameGgra9537.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length537
Homology
BLAST of Ggra9537.t1 vs. uniprot
Match: A0A2V3IEY8 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY8_9FLOR)

HSP 1 Score: 439 bits (1129), Expect = 2.740e-146
Identity = 235/514 (45.72%), Postives = 326/514 (63.42%), Query Frame = 0
Query:   27 MRGVKRGMTDRIEHGNLRPRKISKTKSNMTPVEAVNETTDAKSASRRAHLAKANVDTEIQNAHGNAPRRGRFLRTQRLWQQNLELINHTAPEFFSTSDSRLSRSSRTWREGKIYEGLNATRQNCLALRKLHEVFWKPKERMSFAD-KEGFRRLSHTVSQFLRLCVARRLCSKLDPYKTHVLFENAVKMNVVQRFIDFHIECYSPRTVERKTRHMKKLCMIAAGFVRSIRGRERIAQVSKFLDIIINSRRSQIGPGHAEQHLKPILPSIFVRQCFQLALFDLNDMISKYHSKESGLE----IIRNGEFLSRWSSAFVTFIAICSGGQNPETLASIEVPSDEDFKGMLDRAVQAGFVQLAALRHKRTQALGLPVVILPLCSITILRFQIKVVHPMITSLFSSGGSIGALRPLIVHSVTGKRMESWKIAYEFKKYVSERCPIMRSINLRSLKESALHMFLAGFREKEILRGHSEGQFLDVAARYANTTSKQVKICVGARGSMAHEATAKELTKVFEK 535
            MRG KR   +R E+     RK  K       V+  +   +  + S+R+   +     E Q   G +    R    QRLW QNL+ I  + P FFSTS S+LSR SR W  G+ YEG+NAT  NCL L K+H+VFWKPKE+ + +   + FRRLS+TVSQFLRLC++R +C + D Y+   LF     + VVQRF+DFH+EC+SPRTV+RK RH+KK+CM+A+G  RS+     + +VS++LD +I++   + G     Q +KP      ++ CF+LA  DLNDMI++Y+S ESG +     +    F+S+W+  FV ++ I SGGQNP T++ +EVP DE+ +G+L+ A  AG VQ  +LR +R  ALGLP+V L   S   +RFQ+KV+ P+I+SL       G  RPL+V + +G RM  W+++YEF KY  +RCP M S++L SLK SA+ +FL GFRE E+  GH+EGQ LDV AR+ NTTS QVK CVG RGS  ++A A EL +  EK
Sbjct:    1 MRGTKRRFEERPEYEVSVSRKCLKKHVETALVQIAS--LERNTRSQRSAEFERPAGLETQTDSGISKHNARAREAQRLWLQNLQSICSSQPRFFSTSSSKLSRLSRVWGNGEQYEGVNATADNCLGLWKIHDVFWKPKEQWNLSQGSDEFRRLSNTVSQFLRLCISRGVCRRNDAYQMDALFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNS-ESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMRPWQVSYEFHKYADQRCPEMSSVSLSSLKRSAMSVFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEYKAIASELARCLEK 511          
BLAST of Ggra9537.t1 vs. uniprot
Match: A0A2V3IG72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG72_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 3.930e-66
Identity = 133/334 (39.82%), Postives = 186/334 (55.69%), Query Frame = 0
Query:  206 LFENAVKMNVVQRFIDFHIECYSPRTVERKTRHMKKLCMIAAGFVRSIRGRERIAQVSKFLDIIINSRRSQIGPGHAEQHLKPILPSIFVRQCFQLALFDLNDMISKYHSKESGLE----IIRNGEFLSRWSSAFVTFIAICSGGQNPETLASIEVPSDEDFKGMLDRAVQAGFVQLAALRHKRTQALGLPVVILPLCSITILRFQIKVVHPMITSLFSSGGSIGALRPLIVHSVTGKRMESWKIAYEFKKYVSERCPIMRSINLRSLKESALHMFLAGFREKEILRGHSEGQFLDVAARYANTTSKQVKICVGARGSMAHEATAKELTKVFEK 535
            LF     + VVQRF+DFH+EC+SPRTV+RK RH+KK+CM+A+G  RS+     + +VS++LD +I++   + G     Q +KP      ++ CF+LA  DLNDMI++Y+S ESG +     +    F+S+W+  FV ++ I SGGQNP T++ +EVP DE+ +G+L+ A  AG VQ  +LR +R  ALGLP                     M    ++       LR   V     +R E  +  + F K+V  +C                  FL GFRE E+  GH+EGQ LDV AR+ NTTS QVK CVG RGS  H+A A EL +  EK
Sbjct:    4 LFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNS-ESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLP---------------------MHEERYAYEAMACILRISQV-----RRSEVSRNVFCFPKFVKTQCN---------------ERFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEHKAIASELARCLEK 295          
BLAST of Ggra9537.t1 vs. uniprot
Match: A0A2V3ID73 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID73_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 1.090e-41
Identity = 86/212 (40.57%), Postives = 133/212 (62.74%), Query Frame = 0
Query:  259 IAQVSKFLDIIINSRRSQIGPGHAEQHLKPILPSIFVRQCFQLALFDLNDMISKYHSKESGLE----IIRNGEFLSRWSSAFVTFIAICSGGQNPETLASIEVPSDEDFKGMLDRAVQAGFVQLAALRHKRTQALGLPVVILPLCSITILRFQIKVVHPMITSLFSSGGSIGALRPLIVHSVTGKRMESWKIAYEFKKYVSERCPIMRSINL 466
            + +VS++ D +I++   + G     Q +KP      ++ CF+LA  DLNDMI++Y+S ESG +     +    F+S+W+  FV ++ I SGGQNP T++ +EVP DE+ +G+L+ A  AG VQ  +LR +R  ALGLP+V L   S   +RFQ+KV+ P+I+SL       G  RPL+V + +G RM  W+++Y+F K   +RCP M S++L
Sbjct:    7 LERVSRYSDDVISAYLRKTGAKRPPQKVKPNNSLHLLKTCFRLAHADLNDMIAQYNS-ESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMMPWQVSYKFHKCADQRCPEMSSVSL 217          
The following BLAST results are available for this feature:
BLAST of Ggra9537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEY82.740e-14645.72Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IG723.930e-6639.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID731.090e-4140.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 414..432
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..387
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 409..413
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 433..536

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:807132..808742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9537.t1Ggra9537.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 807132..808742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9537.t1 ID=Ggra9537.t1|Name=Ggra9537.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=537bp
MDYDSFKTLADIEPLEDDEMGISTSHMRGVKRGMTDRIEHGNLRPRKISK
TKSNMTPVEAVNETTDAKSASRRAHLAKANVDTEIQNAHGNAPRRGRFLR
TQRLWQQNLELINHTAPEFFSTSDSRLSRSSRTWREGKIYEGLNATRQNC
LALRKLHEVFWKPKERMSFADKEGFRRLSHTVSQFLRLCVARRLCSKLDP
YKTHVLFENAVKMNVVQRFIDFHIECYSPRTVERKTRHMKKLCMIAAGFV
RSIRGRERIAQVSKFLDIIINSRRSQIGPGHAEQHLKPILPSIFVRQCFQ
LALFDLNDMISKYHSKESGLEIIRNGEFLSRWSSAFVTFIAICSGGQNPE
TLASIEVPSDEDFKGMLDRAVQAGFVQLAALRHKRTQALGLPVVILPLCS
ITILRFQIKVVHPMITSLFSSGGSIGALRPLIVHSVTGKRMESWKIAYEF
KKYVSERCPIMRSINLRSLKESALHMFLAGFREKEILRGHSEGQFLDVAA
RYANTTSKQVKICVGARGSMAHEATAKELTKVFEKS*
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