Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra996.t1.start1 | Ggra996.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 100706..100708 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra996.t1 ID=Ggra996.t1|Name=Ggra996.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=494bp
MQVDHKVPATYNRPAMAVGGWILKCGTLYPTHQLREHVQTLARAEPDSAT
TAVTFNDGGEQTTVNLCVGAQQLARLLPGLLSPDHRLKLRIERDEMDSFL
STLHSLLLLNPLDVQRFPPIFLALSCKYKLYPLYFAQLELLMDSACDYNL
RLSAFLNQYDYVLQMLGDRLPRLFWGHLARRIVLECEHALRLSAAVPMLC
GDFPFRRADGPPDYRNVWQLLHELDLVQVMFNFAAGLSASSFPDVLHFVF
TKCVDLTQADVHLMQDRYVQQLLALDWRHLRAHLSRVIQLAKAWPQRLRA
ILKQSLCRQPMKNVDVFSPRICFNVQLATSQKQAHVVKEHLGPAFKQFTF
SFKALVENDRFFLDLTLWRQRGSGRAVATDQHGKIHMKQGDQIGVQVSAL
ECDCLCEMNRFTTNLSKPKHWPIYMPDRDNDNELFFTERVPKKRIVLMKS
IEDEWLQFHSIGCSLVVSVSLRWIEPARGSLYLKQVPDPDLVS* back to topspliced messenger RNA >Ggra996.t1 ID=Ggra996.t1|Name=Ggra996.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1482bp|location=Sequence derived from alignment at tig00000027_pilon:100706..102187+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAAGTCGATCACAAAGTGCCCGCCACGTACAACCGCCCCGCCATGGC
CGTGGGCGGCTGGATCCTCAAATGCGGCACACTCTACCCGACGCACCAGC
TGCGCGAGCACGTGCAAACGCTGGCGCGCGCCGAACCCGACTCCGCAACC
ACCGCCGTCACCTTCAACGACGGCGGCGAGCAAACCACCGTCAACCTGTG
TGTGGGTGCTCAGCAGCTCGCGCGCCTGCTGCCGGGGCTGCTATCGCCCG
ACCACCGCCTCAAGCTGCGCATCGAGCGCGACGAGATGGACAGCTTCCTC
AGCACGTTGCACAGCTTGCTGCTGCTCAACCCGCTGGACGTGCAGCGCTT
TCCGCCCATCTTCCTGGCGCTCTCCTGCAAGTACAAGCTGTACCCGCTCT
ACTTTGCGCAGCTGGAGCTGCTCATGGACAGCGCCTGCGACTACAACTTG
CGCCTGTCCGCCTTTCTCAACCAGTACGACTACGTGCTGCAGATGCTGGG
CGACCGCCTGCCGCGCCTGTTCTGGGGCCATCTGGCGCGCCGCATCGTGC
TCGAGTGCGAGCACGCGCTGCGCCTCAGCGCCGCCGTGCCCATGCTGTGC
GGCGACTTTCCGTTCCGCCGCGCCGACGGGCCGCCCGACTACCGCAACGT
GTGGCAGCTGCTGCACGAGCTGGACCTCGTGCAGGTGATGTTCAACTTCG
CCGCCGGCCTCAGCGCCAGCTCCTTTCCGGACGTGCTGCACTTTGTGTTC
ACCAAGTGCGTCGACCTCACGCAGGCCGACGTGCACTTGATGCAGGACCG
CTACGTGCAGCAGCTGCTGGCGCTGGATTGGCGCCACCTGCGCGCACACC
TCTCCCGTGTCATCCAGCTCGCAAAGGCGTGGCCCCAACGTCTCAGGGCC
ATCCTCAAACAGTCGCTATGCCGCCAGCCCATGAAGAACGTGGACGTGTT
CTCCCCGCGCATCTGCTTCAACGTGCAGCTCGCCACAAGCCAAAAGCAAG
CGCACGTGGTCAAGGAGCACCTTGGCCCGGCGTTCAAGCAGTTCACGTTT
TCGTTCAAGGCGCTCGTGGAGAACGACCGCTTCTTCTTGGACCTCACGCT
GTGGCGGCAGCGAGGCAGCGGACGCGCAGTGGCCACCGACCAGCACGGCA
AGATACACATGAAACAAGGCGACCAAATCGGCGTTCAGGTGAGCGCGCTC
GAGTGTGATTGCCTTTGTGAGATGAACAGGTTCACCACGAACCTTTCCAA
ACCAAAGCACTGGCCCATATACATGCCTGACCGAGACAACGACAACGAGC
TGTTTTTCACCGAGCGGGTTCCAAAGAAGAGGATCGTGCTGATGAAAAGC
ATTGAGGACGAATGGTTGCAGTTCCACTCCATTGGTTGTAGCCTGGTGGT
GAGCGTCTCGCTACGCTGGATAGAGCCAGCGAGAGGATCCCTGTATCTGA
AGCAAGTGCCCGACCCTGACTTGGTTTCGTAA back to topprotein sequence of Ggra996.t1 >Ggra996.t1 ID=Ggra996.t1|Name=Ggra996.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=494bp
MQVDHKVPATYNRPAMAVGGWILKCGTLYPTHQLREHVQTLARAEPDSAT
TAVTFNDGGEQTTVNLCVGAQQLARLLPGLLSPDHRLKLRIERDEMDSFL
STLHSLLLLNPLDVQRFPPIFLALSCKYKLYPLYFAQLELLMDSACDYNL
RLSAFLNQYDYVLQMLGDRLPRLFWGHLARRIVLECEHALRLSAAVPMLC
GDFPFRRADGPPDYRNVWQLLHELDLVQVMFNFAAGLSASSFPDVLHFVF
TKCVDLTQADVHLMQDRYVQQLLALDWRHLRAHLSRVIQLAKAWPQRLRA
ILKQSLCRQPMKNVDVFSPRICFNVQLATSQKQAHVVKEHLGPAFKQFTF
SFKALVENDRFFLDLTLWRQRGSGRAVATDQHGKIHMKQGDQIGVQVSAL
ECDCLCEMNRFTTNLSKPKHWPIYMPDRDNDNELFFTERVPKKRIVLMKS
IEDEWLQFHSIGCSLVVSVSLRWIEPARGSLYLKQVPDPDLVS* back to topmRNA from alignment at tig00000027_pilon:100706..102187+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra996.t1 ID=Ggra996.t1|Name=Ggra996.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1482bp|location=Sequence derived from alignment at tig00000027_pilon:100706..102187+ (Gracilaria gracilis GNS1m male)
ATGCAAGTCGATCACAAAGTGCCCGCCACGTACAACCGCCCCGCCATGGC
CGTGGGCGGCTGGATCCTCAAATGCGGCACACTCTACCCGACGCACCAGC
TGCGCGAGCACGTGCAAACGCTGGCGCGCGCCGAACCCGACTCCGCAACC
ACCGCCGTCACCTTCAACGACGGCGGCGAGCAAACCACCGTCAACCTGTG
TGTGGGTGCTCAGCAGCTCGCGCGCCTGCTGCCGGGGCTGCTATCGCCCG
ACCACCGCCTCAAGCTGCGCATCGAGCGCGACGAGATGGACAGCTTCCTC
AGCACGTTGCACAGCTTGCTGCTGCTCAACCCGCTGGACGTGCAGCGCTT
TCCGCCCATCTTCCTGGCGCTCTCCTGCAAGTACAAGCTGTACCCGCTCT
ACTTTGCGCAGCTGGAGCTGCTCATGGACAGCGCCTGCGACTACAACTTG
CGCCTGTCCGCCTTTCTCAACCAGTACGACTACGTGCTGCAGATGCTGGG
CGACCGCCTGCCGCGCCTGTTCTGGGGCCATCTGGCGCGCCGCATCGTGC
TCGAGTGCGAGCACGCGCTGCGCCTCAGCGCCGCCGTGCCCATGCTGTGC
GGCGACTTTCCGTTCCGCCGCGCCGACGGGCCGCCCGACTACCGCAACGT
GTGGCAGCTGCTGCACGAGCTGGACCTCGTGCAGGTGATGTTCAACTTCG
CCGCCGGCCTCAGCGCCAGCTCCTTTCCGGACGTGCTGCACTTTGTGTTC
ACCAAGTGCGTCGACCTCACGCAGGCCGACGTGCACTTGATGCAGGACCG
CTACGTGCAGCAGCTGCTGGCGCTGGATTGGCGCCACCTGCGCGCACACC
TCTCCCGTGTCATCCAGCTCGCAAAGGCGTGGCCCCAACGTCTCAGGGCC
ATCCTCAAACAGTCGCTATGCCGCCAGCCCATGAAGAACGTGGACGTGTT
CTCCCCGCGCATCTGCTTCAACGTGCAGCTCGCCACAAGCCAAAAGCAAG
CGCACGTGGTCAAGGAGCACCTTGGCCCGGCGTTCAAGCAGTTCACGTTT
TCGTTCAAGGCGCTCGTGGAGAACGACCGCTTCTTCTTGGACCTCACGCT
GTGGCGGCAGCGAGGCAGCGGACGCGCAGTGGCCACCGACCAGCACGGCA
AGATACACATGAAACAAGGCGACCAAATCGGCGTTCAGGTGAGCGCGCTC
GAGTGTGATTGCCTTTGTGAGATGAACAGGTTCACCACGAACCTTTCCAA
ACCAAAGCACTGGCCCATATACATGCCTGACCGAGACAACGACAACGAGC
TGTTTTTCACCGAGCGGGTTCCAAAGAAGAGGATCGTGCTGATGAAAAGC
ATTGAGGACGAATGGTTGCAGTTCCACTCCATTGGTTGTAGCCTGGTGGT
GAGCGTCTCGCTACGCTGGATAGAGCCAGCGAGAGGATCCCTGTATCTGA
AGCAAGTGCCCGACCCTGACTTGGTTTCGTAA back to topCoding sequence (CDS) from alignment at tig00000027_pilon:100706..102187+ >Ggra996.t1 ID=Ggra996.t1|Name=Ggra996.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1482bp|location=Sequence derived from alignment at tig00000027_pilon:100706..102187+ (Gracilaria gracilis GNS1m male)
ATGCAAGTCGATCACAAAGTGCCCGCCACGTACAACCGCCCCGCCATGGC
CGTGGGCGGCTGGATCCTCAAATGCGGCACACTCTACCCGACGCACCAGC
TGCGCGAGCACGTGCAAACGCTGGCGCGCGCCGAACCCGACTCCGCAACC
ACCGCCGTCACCTTCAACGACGGCGGCGAGCAAACCACCGTCAACCTGTG
TGTGGGTGCTCAGCAGCTCGCGCGCCTGCTGCCGGGGCTGCTATCGCCCG
ACCACCGCCTCAAGCTGCGCATCGAGCGCGACGAGATGGACAGCTTCCTC
AGCACGTTGCACAGCTTGCTGCTGCTCAACCCGCTGGACGTGCAGCGCTT
TCCGCCCATCTTCCTGGCGCTCTCCTGCAAGTACAAGCTGTACCCGCTCT
ACTTTGCGCAGCTGGAGCTGCTCATGGACAGCGCCTGCGACTACAACTTG
CGCCTGTCCGCCTTTCTCAACCAGTACGACTACGTGCTGCAGATGCTGGG
CGACCGCCTGCCGCGCCTGTTCTGGGGCCATCTGGCGCGCCGCATCGTGC
TCGAGTGCGAGCACGCGCTGCGCCTCAGCGCCGCCGTGCCCATGCTGTGC
GGCGACTTTCCGTTCCGCCGCGCCGACGGGCCGCCCGACTACCGCAACGT
GTGGCAGCTGCTGCACGAGCTGGACCTCGTGCAGGTGATGTTCAACTTCG
CCGCCGGCCTCAGCGCCAGCTCCTTTCCGGACGTGCTGCACTTTGTGTTC
ACCAAGTGCGTCGACCTCACGCAGGCCGACGTGCACTTGATGCAGGACCG
CTACGTGCAGCAGCTGCTGGCGCTGGATTGGCGCCACCTGCGCGCACACC
TCTCCCGTGTCATCCAGCTCGCAAAGGCGTGGCCCCAACGTCTCAGGGCC
ATCCTCAAACAGTCGCTATGCCGCCAGCCCATGAAGAACGTGGACGTGTT
CTCCCCGCGCATCTGCTTCAACGTGCAGCTCGCCACAAGCCAAAAGCAAG
CGCACGTGGTCAAGGAGCACCTTGGCCCGGCGTTCAAGCAGTTCACGTTT
TCGTTCAAGGCGCTCGTGGAGAACGACCGCTTCTTCTTGGACCTCACGCT
GTGGCGGCAGCGAGGCAGCGGACGCGCAGTGGCCACCGACCAGCACGGCA
AGATACACATGAAACAAGGCGACCAAATCGGCGTTCAGGTGAGCGCGCTC
GAGTGTGATTGCCTTTGTGAGATGAACAGGTTCACCACGAACCTTTCCAA
ACCAAAGCACTGGCCCATATACATGCCTGACCGAGACAACGACAACGAGC
TGTTTTTCACCGAGCGGGTTCCAAAGAAGAGGATCGTGCTGATGAAAAGC
ATTGAGGACGAATGGTTGCAGTTCCACTCCATTGGTTGTAGCCTGGTGGT
GAGCGTCTCGCTACGCTGGATAGAGCCAGCGAGAGGATCCCTGTATCTGA
AGCAAGTGCCCGACCCTGACTTGGTTTCGTAA back to top
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