Ggra7171.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7171.t1
Unique NameGgra7171.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Homology
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A2V3IIK2 (Ras-related protein RABH1d n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IIK2_9FLOR)

HSP 1 Score: 410 bits (1055), Expect = 1.230e-144
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0
Query:    4 MTSSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSASSCAC 219
            M S+Q+ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENS+LAGETDLIDVNLSPRPNATG+Q SSASSCAC
Sbjct:    1 MASAQAASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSELAGETDLIDVNLSPRPNATGDQASSASSCAC 216          
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A7S0T3X7 (Hypothetical protein n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A7S0T3X7_9RHOD)

HSP 1 Score: 338 bits (866), Expect = 1.850e-115
Identity = 174/210 (82.86%), Postives = 188/210 (89.52%), Query Frame = 0
Query:   14 SVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSA----SSCAC 219
            SV PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFL+ +KWI++VRNERG DVI+VLVGNKTD+T+ RQVS EEG+AKAKEHDIMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TDLIDVNLS +PNATG   + A    SSCAC
Sbjct:   32 SVPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVVNRTSFLNTSKWIDEVRNERGNDVILVLVGNKTDQTDRRQVSLEEGDAKAKEHDIMFIETSAKAGFNVKALFRKIAAALPGMENSAMARDTDLIDVNLSSQPNATGSAATGAGGADSSCAC 241          
BLAST of Ggra7171.t1 vs. uniprot
Match: ras-related protein RABH1d-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0672 (ras-related protein RABH1d-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0672)

HSP 1 Score: 334 bits (856), Expect = 2.970e-114
Identity = 174/220 (79.09%), Postives = 187/220 (85.00%), Query Frame = 0
Query:    4 MTSSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATG----EQTSSASSCAC 219
            M + Q     SV PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFLS +KWI+DVRNERG DVI+VLVGNKTD+ E RQVS EEGEAKAKEH IMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TD+IDV LSPRP+ +         SASSC+C
Sbjct:    1 MVAPQEQGGASVPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVINRTSFLSTSKWIDDVRNERGNDVILVLVGNKTDQAEKRQVSVEEGEAKAKEHGIMFIETSAKAGFNVKALFRKIAAALPGMENSHMAKDTDMIDVVLSPRPDGSAGPGNAAEGSASSCSC 220          
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A1X6PFR0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFR0_PORUM)

HSP 1 Score: 327 bits (838), Expect = 1.370e-111
Identity = 169/212 (79.72%), Postives = 186/212 (87.74%), Query Frame = 0
Query:    9 SASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNA-TGEQTSSASSCAC 219
            +AS+ SV PLAKYKLV +GDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFLS ++WIE+VR ERG DVI+VLVGNKTD+ + RQV  EEGEAKAKEH+IMFIETSAK GFN+K+LFRKIAAALPGMENS +A ETDLIDV L+P+P A        AS+CAC
Sbjct:    4 AASSASVPPLAKYKLVFVGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRASFLSTSRWIEEVRTERGGDVILVLVGNKTDQADRRQVGVEEGEAKAKEHEIMFIETSAKVGFNVKALFRKIAAALPGMENSAMARETDLIDVKLNPQPPAGAAGGAGGASTCAC 215          
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A5J4Z394 (Ras-related protein RABH1d n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z394_PORPP)

HSP 1 Score: 323 bits (829), Expect = 2.900e-110
Identity = 167/209 (79.90%), Postives = 181/209 (86.60%), Query Frame = 0
Query:   11 SAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSASSCAC 219
            S+ +  PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SF++  KWIE+VRNERG DVI+VLVGNKTD+TE RQVS EEG+AKAKEHDIMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TDLIDV L+   + T    S  SSC C
Sbjct:    5 SSSAPTPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVVNRASFINTTKWIEEVRNERGNDVILVLVGNKTDQTEKRQVSVEEGDAKAKEHDIMFIETSAKAGFNVKALFRKIAAALPGMENSAMARDTDLIDVKLNASAS-TNPTASQESSCGC 212          
BLAST of Ggra7171.t1 vs. uniprot
Match: I0YR71 (Ras-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YR71_COCSC)

HSP 1 Score: 310 bits (795), Expect = 4.360e-105
Identity = 161/211 (76.30%), Postives = 182/211 (86.26%), Query Frame = 0
Query:   10 ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNA-TGEQTSSASSCAC 219
            A++ +V PLAKYKLV LGDQ  GKTSIITRFMYDKFDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFL+  +WIE+VR ERG+DVI+VLVGNKTD  + RQVS EEG+AKA+E ++MFIETSAK GFNIK+LFRKIAAALPGME+   A + DL+DVNLS   N+  G  +S+ SSCAC
Sbjct:    2 AASTTVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWIEEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEGDAKAREFNVMFIETSAKAGFNIKALFRKIAAALPGMESLSAAKQEDLVDVNLSATANSGRGAASSAPSSCAC 212          
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A4D9D1C8 (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.280e-104
Identity = 157/218 (72.02%), Postives = 181/218 (83.03%), Query Frame = 0
Query:    2 PSMTSSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSASSCAC 219
            P  + +  AS   +  LAKYKLV LGDQG GKTSIITRFMYD F+ NYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+TNR SFL+ +KW++DVRNERG DVII+LVGNKTD ++ RQVSTEEGE KAK+ +IMFIETSAK GFNIK LFRK+A ALPGME++Q  G  +LID+ L+  P ++ +Q  + S CAC
Sbjct:    6 PVKSPTSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAPASSSDQADTRSRCAC 223          
BLAST of Ggra7171.t1 vs. uniprot
Match: W7U9T7 (Small gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9T7_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.050e-103
Identity = 158/218 (72.48%), Postives = 181/218 (83.03%), Query Frame = 0
Query:    2 PSMTSSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSASSCAC 219
            P  + +  AS   +  LAKYKLV LGDQG GKTSIITRFMYD F+ NYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+TNR SFL+ +KW++DVRNERG DVII+LVGNKTD ++ RQVSTEEGE KAK+ +IMFIETSAK GFNIK LFRK+A ALPGME++Q  G  +LID+ L+  P ++ EQ  + S CAC
Sbjct:   99 PVKSPTSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAPASSSEQADTRSRCAC 316          
BLAST of Ggra7171.t1 vs. uniprot
Match: A0A2S3H431 (Uncharacterized protein n=3 Tax=PACMAD clade TaxID=147370 RepID=A0A2S3H431_9POAL)

HSP 1 Score: 306 bits (784), Expect = 1.860e-103
Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 0
Query:   15 VQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATGEQTSSASSCAC 219
            V  LAKYKLV LGDQ  GKTSIITRFMYDKFDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFL+ ++WI++VRNERG DVI+VLVGNKTD  + RQVSTEEGE+K+KE ++MFIETSAK GFNIK LFRKIAAALPGME    A + D++DVNL P    +  Q  + S CAC
Sbjct:    5 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTSRWIDEVRNERGGDVIVVLVGNKTDLVDKRQVSTEEGESKSKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAKQEDMVDVNLKPTSGQSNSQQQAGSGCAC 209          
BLAST of Ggra7171.t1 vs. uniprot
Match: E1ZNZ1 (GTP binding protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZNZ1_CHLVA)

HSP 1 Score: 305 bits (782), Expect = 4.010e-103
Identity = 159/210 (75.71%), Postives = 179/210 (85.24%), Query Frame = 0
Query:   11 SAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNA-TGEQTSSASSCAC 219
            +A  VQPLAKYKLV LGDQ  GKTSIITRFMYDKFD  YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVT+R SFL++ +W+E+VR ERG+DVIIVLVGNKTD  + RQVS EEG+AKA+E ++MFIETSAK GFNIK+LFRKIAAALPGME    A + DL+D+NL+P   A  G   S+ S+CAC
Sbjct:    2 AATQVQPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTSRQSFLNIQRWVEEVRAERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMEALNSAKQEDLVDINLAPSSAAKAGAGGSAGSTCAC 211          
The following BLAST results are available for this feature:
BLAST of Ggra7171.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIK21.230e-14497.22Ras-related protein RABH1d n=2 Tax=Rhodymeniophyci... [more]
A0A7S0T3X71.850e-11582.86Hypothetical protein n=2 Tax=Porphyridiaceae TaxID... [more]
ras-related protein RABH1d-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E06722.970e-11479.09ras-related protein RABH1d-like n=1 Tax=Mercenaria... [more]
A0A1X6PFR01.370e-11179.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z3942.900e-11079.90Ras-related protein RABH1d n=1 Tax=Porphyridium pu... [more]
I0YR714.360e-10576.30Ras-domain-containing protein n=1 Tax=Coccomyxa su... [more]
A0A4D9D1C81.280e-10472.02Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U9T71.050e-10372.48Small gtp-binding protein n=1 Tax=Nannochloropsis ... [more]
A0A2S3H4311.860e-10376.10Uncharacterized protein n=3 Tax=PACMAD clade TaxID... [more]
E1ZNZ14.010e-10375.71GTP binding protein n=1 Tax=Chlorella variabilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 124..137
score: 47.92
coord: 159..181
score: 35.93
coord: 21..42
score: 41.79
coord: 44..60
score: 33.76
coord: 62..84
score: 48.05
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 26..218
e-value: 7.1E-8
score: 42.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 18..184
e-value: 2.0E-33
score: 127.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 21..184
e-value: 1.7E-87
score: 306.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..219
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 14..219
NoneNo IPR availablePANTHERPTHR24073:SF1128RAS-RELATED PROTEIN RABH1B-LIKEcoord: 14..219
NoneNo IPR availablePROSITEPS51419RABcoord: 14..217
score: 32.075943
NoneNo IPR availablePROSITEPS51420RHOcoord: 14..181
score: 10.829132
NoneNo IPR availableCDDcd01861Rab6coord: 21..181
e-value: 6.36401E-114
score: 320.338
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 23..183
e-value: 4.5E-13
score: 47.4
IPR001806Small GTPasePFAMPF00071Rascoord: 22..180
e-value: 1.1E-58
score: 197.4
IPR001806Small GTPasePROSITEPS51421RAScoord: 16..219
score: 17.955685
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..177
e-value: 4.6E-29
score: 99.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 17..212
e-value: 1.9E-67
score: 228.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:105816..106475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7171.t1Ggra7171.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 105816..106475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7171.t1 ID=Ggra7171.t1|Name=Ggra7171.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MPSMTSSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQ
ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY
DVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEA
KAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNL
SPRPNATGEQTSSASSCAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase