Ggra7427.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7427.t1
Unique NameGgra7427.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
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BLAST of Ggra7427.t1 vs. uniprot
Match: A0A2V3J689 (Sister chromatid cohesion protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J689_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 3.820e-34
Identity = 86/150 (57.33%), Postives = 101/150 (67.33%), Query Frame = 0 
Query:   15 LMDKQEQNSASKTELGGESRKGNRADDKMMDEEIGDRWSESSEECSANSSKTCGNE--VMLAAEEDTEAGFLALSAQIMVPHLQNAVLRRSHTIPRTVANIFRLLVRQGLLLPATVVTSLFILVMDRDTGCRELVWKVLNVLADRHAGMF 162
            L D++E+NS +K E   ESRK  R  D +  E   ++    +E C  NS K    E  V+LAAEED+EAGFLALSAQ+MVP LQ AV   S  I R  ANIF LLVRQGLLLPAT VTSLFIL++D D  CREL  +V+  LADRHAGMF
Sbjct: 1380 LRDEEERNSYTKPEPNDESRKRRRPSD-VTAENTSNKMG--AEFCEGNSGKVTVQEQQVVLAAEEDSEAGFLALSAQLMVPRLQKAVRSSSIAIRRIAANIFGLLVRQGLLLPATAVTSLFILLLDNDKRCRELACRVVRFLADRHAGMF 1526
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BLAST of Ggra7427.t1 vs. uniprot
Match: R7QQJ9 (Sister chromatid cohesion protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQJ9_CHOCR)

HSP 1 Score: 97.4 bits (241), Expect = 2.380e-20
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 0 
Query:   73 LAAEEDTEAGFLALSAQIMVPHLQNAVLRRSHTIPRTVANIFRLLVRQGLLLPATVVTSLFILVMDRDTGCRELVWKVLNVLADRHAGMFCCGYATG 169
            L AEED EAG+LALSAQ M+  L+ AV   +  + + VA+I  LLVRQGL+LPATV+ SLF L++D D  CRE  ++V++ LADRH+ M       G
Sbjct:  385 LGAEEDAEAGYLALSAQTMIARLETAVHSAARPVRQVVAHILGLLVRQGLVLPATVIPSLFCLLLDGDPSCREFSYRVISFLADRHSDMLASAALPG 481
The following BLAST results are available for this feature:
BLAST of Ggra7427.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6893.820e-3457.33Sister chromatid cohesion protein n=1 Tax=Gracilar... [more]
R7QQJ92.380e-2051.55Sister chromatid cohesion protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1102324..1102848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7427.t1Ggra7427.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1102324..1102848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7427.t1 ID=Ggra7427.t1|Name=Ggra7427.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MTTSSACVKVYAIFLMDKQEQNSASKTELGGESRKGNRADDKMMDEEIGD
RWSESSEECSANSSKTCGNEVMLAAEEDTEAGFLALSAQIMVPHLQNAVL
RRSHTIPRTVANIFRLLVRQGLLLPATVVTSLFILVMDRDTGCRELVWKV
LNVLADRHAGMFCCGYATGAAIFL*
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