Ggra1071.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1071.t1
Unique NameGgra1071.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length498
Homology
BLAST of Ggra1071.t1 vs. uniprot
Match: A0A2V3IR12 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR12_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 4.040e-17
Identity = 163/505 (32.28%), Postives = 219/505 (43.37%), Query Frame = 0
Query:    6 RRSARLQQA--ECNALPERATKRQRHEKPATGVSASRTPLADLSNSNTDETRAKSRHQIPTKQTQKAYKRTRSSSTAEAKQEAEYRLGSKPILQAETVPVTNQMKPEASRTRSQTRKVQERGVKQIGSRANSEKLLSLAAEQRKRARKPNSMQMTSSSSPKQSKVDSTAPXXXXXXXXXXXXXXXXHERKDASSDI---PLPQAKDGNLPKPYRQNSPSPPLYPEDEIRPVPSQPKALRHERRPKRNLRPPSPXXXXXXXXXXXXXXKLKKTPSYGTRTKLKEVTNLKYPVPKPQPPRLTSQIQSA---PSHQSPSLPISSSLLEHE---DEVAKPSLLDEPSNAERDTQSTPRSRIVRQSSGTPSSEQLLQKDPSADLAPRTQTPGFRSELETRSIYKSQIGSKAAAPIHTYSKRRQNNQNLALPSRKSLGVRSRTSSGESPDSKDSIAYDSQXXXXXXXXXXXXXXXXXXDRE----DPALVSFIGQQRKLWDEIDGIDLEED 495
            RRSARL+ A  +  ++P  A KRQR E+P      +R+PL +++N+ T  TRA     I T    +   +   ++    K+ ++  L + P        + N  +   S T S+  + Q   V++      S  L        ++ + P+  +   + S     ++                      RK  S  +    L  A    L +  R   PSPPLYPEDEI+P PS P + + E +  R   P  P XXXXXXXXXXXXX                         + Q  R TS    A   PSH   S P S S    +       K +  +EPS+   +T  TP +    Q            KD   D +P ++        E  +  +    S   AP+HTYSKRR   Q+LALPSRKSLGVRSR SSG S  S  S +   +           XXXXXX D E    D AL SFIGQQRK+WDEID IDLEED
Sbjct:    4 RRSARLRAAARDSQSIPP-APKRQRRERPLANGGCARSPLHEVTNATTISTRA--HRSIHTSNESRCVLKDGKTTEHAQKRASKRHLRTTPTPNVHQATIANPERVRTSETPSRRSRSQTLSVRKENELDGSSAL--------RKEKDPDKSEAQVAESQASQTLEDERRTLANMKAKNSEEALPSLMRKSPSPPVGSSKLSLATRNRLKRTPRP--PSPPLYPEDEIQPKPS-PTSKQIEGKQHRKPIPRPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRNQALRTTSAAALATLAPSHSRSSPPRSPSTQGAQVSRKASQKQTSREEPSDERTETPVTPHASQNIQPERV--------KDGPPDPSPASEPRRLSFSPEMPAPPRPPTASGLPAPLHTYSKRRHAVQDLALPSRKSLGVRSRASSGGSTGSA-SKSERGEAPLDEAESDVEXXXXXXSDEESGKVDSALRSFIGQQRKMWDEIDNIDLEED 485          
The following BLAST results are available for this feature:
BLAST of Ggra1071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR124.040e-1732.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:102522..104015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1071.t1Ggra1071.t1Gracilaria gracilis GNS1m malemRNAtig00000868_pilon 102522..104015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1071.t1 ID=Ggra1071.t1|Name=Ggra1071.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=498bp
MLEMPRRSARLQQAECNALPERATKRQRHEKPATGVSASRTPLADLSNSN
TDETRAKSRHQIPTKQTQKAYKRTRSSSTAEAKQEAEYRLGSKPILQAET
VPVTNQMKPEASRTRSQTRKVQERGVKQIGSRANSEKLLSLAAEQRKRAR
KPNSMQMTSSSSPKQSKVDSTAPSPAQKKSGDPSPPSPTHERKDASSDIP
LPQAKDGNLPKPYRQNSPSPPLYPEDEIRPVPSQPKALRHERRPKRNLRP
PSPPPLYPEDEIQPLPTKLKKTPSYGTRTKLKEVTNLKYPVPKPQPPRLT
SQIQSAPSHQSPSLPISSSLLEHEDEVAKPSLLDEPSNAERDTQSTPRSR
IVRQSSGTPSSEQLLQKDPSADLAPRTQTPGFRSELETRSIYKSQIGSKA
AAPIHTYSKRRQNNQNLALPSRKSLGVRSRTSSGESPDSKDSIAYDSQSD
QSDNDDESEDSEPEKSDREDPALVSFIGQQRKLWDEIDGIDLEEDLF*
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