Ggra1065.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1065.t1
Unique NameGgra1065.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length367
Homology
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A2V3IR15 (Ribosomal protein L19 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR15_9FLOR)

HSP 1 Score: 330 bits (847), Expect = 6.420e-111
Identity = 176/192 (91.67%), Postives = 185/192 (96.35%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEERRKQEGVARVATS 192
            MVSLKLQKRLAASVL CG+NKVWLDPNEIQEIA+ANSRQNIRKLVSDGL+IKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLL KYREAKKIDRYLYHELYLRCKGNVFKNRRVLM+SIHKAKAEKAR+KA+AEQ+EARRLK+RAAR+RKAARLEERRKQ G AR   S
Sbjct:    1 MVSLKLQKRLAASVLRCGRNKVWLDPNEIQEIAVANSRQNIRKLVSDGLIIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLCKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMDSIHKAKAEKARAKALAEQYEARRLKSRAARDRKAARLEERRKQAGTARPTAS 192          
BLAST of Ggra1065.t1 vs. uniprot
Match: R7QQ26 (Ribosomal protein L19 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ26_CHOCR)

HSP 1 Score: 317 bits (812), Expect = 1.360e-105
Identity = 169/185 (91.35%), Postives = 177/185 (95.68%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEERRKQEG 185
            MVSLKLQKRLAASVLGCGKNKVWLDPNE+ EI++ANSRQNIRKLVSDG VIKKPVTVHSRARVR   AAK KGRH GYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARS+A+A+QFEARR+KN+AARERKAARLEERRK EG
Sbjct:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEVNEISMANSRQNIRKLVSDGFVIKKPVTVHSRARVRMNQAAKRKGRHSGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSQALADQFEARRIKNKAARERKAARLEERRKVEG 185          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A1X6NS04 (Ribosomal protein L19 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS04_PORUM)

HSP 1 Score: 284 bits (727), Expect = 1.470e-92
Identity = 151/188 (80.32%), Postives = 168/188 (89.36%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEERRKQEGVAR 188
            M SLKLQKRLAASVL CG+ KVWLDPNE+Q I +ANSRQNIRKLV DG VI+KP TVHSRARVRK + AK KGRH G GKRLGTRDARLPQKV WMRRQRVLRN+LRKYREAKKID++LYHELY+RCKGNVFKN+RVLME IHKAKAEKAR K +A+QFEARR+KN+AARERKA RL+ERR++E  AR
Sbjct:    1 MTSLKLQKRLAASVLRCGQRKVWLDPNEVQVITLANSRQNIRKLVKDGFVIRKPETVHSRARVRKYNEAKRKGRHMGTGKRLGTRDARLPQKVQWMRRQRVLRNMLRKYREAKKIDKHLYHELYVRCKGNVFKNKRVLMEYIHKAKAEKARDKTLADQFEARRIKNKAARERKALRLDERREEEIAAR 188          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A6P5G9L5 (Ribosomal protein L19 n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5G9L5_ANACO)

HSP 1 Score: 263 bits (671), Expect = 4.670e-84
Identity = 136/180 (75.56%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG VIKKP+ +HSR+R R+   AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID++LYHELY++ KGNV+KN+RVLMESIHK+KAEKAR K I++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLNCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIKKPMKIHSRSRARRAMEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHLYHELYMKVKGNVYKNKRVLMESIHKSKAEKAREKTISDQFEAKRAKSKASRERKIARREER 180          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A7N0UKL0 (Ribosomal protein L19 n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UKL0_KALFE)

HSP 1 Score: 263 bits (671), Expect = 5.350e-84
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLA+SVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  +HSR+R R+++ AK KGRH GYGKR GTR+ARLP KVLWMRR RVLR LLRKYREAKKID+++YH++Y++ KGNVFKN+RVLMESIHK+KAEKAR K +A+QFEA+R KN+A+RERK AR EER
Sbjct:    1 MVSLKLQKRLASSVLSCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMNEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLADQFEAKRAKNKASRERKNARREER 180          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A061RHP3 (Ribosomal protein L19 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RHP3_9CHLO)

HSP 1 Score: 262 bits (670), Expect = 5.980e-84
Identity = 141/196 (71.94%), Postives = 163/196 (83.16%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEERRKQEGVARVATSIRSA 196
            MVSLKLQKRLA+SVL CG  KVWLDPNE+ EI++ANSRQNIRKLV+DG VIKKP  +HSRAR R+   AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYR+AKKID++LYHELY +CKGNV+KN+RVLME+IH+ KAEK R KAIA+QFEARR KN+AARERKAAR  ER  Q  V+  A ++  A
Sbjct:    1 MVSLKLQKRLASSVLKCGLRKVWLDPNEVNEISMANSRQNIRKLVNDGFVIKKPTKIHSRARARRAAEAKRKGRHTGYGKRRGTREARLPTKILWMRRLRVLRRLLRKYRDAKKIDKHLYHELYCKCKGNVYKNKRVLMEAIHRQKAEKIRDKAIADQFEARRAKNKAARERKAARRAERFSQGIVSEEAKAVAKA 196          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A383VDY6 (Ribosomal protein L19 n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VDY6_TETOB)

HSP 1 Score: 262 bits (670), Expect = 6.620e-84
Identity = 136/180 (75.56%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVLGCG  KVWLDPNE+ EI++ANSRQNIRKLV DG VI+KP T+HSRAR R+   AK+KGRH GYGKR GTR+ARLP K+LW+RR RVLR LLRKYR++KKID++LYHELY++ KGNVFKN+RVL+E++HK KAEK R KAIA+QFEARR KN+A RERKAAR EER
Sbjct:    1 MVSLKLQKRLAASVLGCGLRKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTTIHSRARARRQAEAKAKGRHTGYGKRRGTREARLPTKLLWIRRLRVLRRLLRKYRDSKKIDKHLYHELYMKVKGNVFKNKRVLIEAVHKQKAEKVREKAIADQFEARRAKNKATRERKAARREER 180          
BLAST of Ggra1065.t1 vs. uniprot
Match: S8E649 (Ribosomal protein L19 (Fragment) n=3 Tax=Pentapetalae TaxID=1437201 RepID=S8E649_9LAMI)

HSP 1 Score: 261 bits (668), Expect = 8.850e-84
Identity = 133/183 (72.68%), Postives = 160/183 (87.43%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEERRKQ 183
            MVSLKLQKRLAASVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  +HSR+R R++  AK KGRH GYGKR GTR+ARLP KVLWMRR RVLR LLRKYRE+KKID+++YH++Y++ KGNVFKN+RVLMESIHK+KAEKAR K +++QFEA+R KN+A+RERK AR EER +Q
Sbjct:    1 MVSLKLQKRLAASVLNCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLQQ 183          
BLAST of Ggra1065.t1 vs. uniprot
Match: I1PB45 (Ribosomal protein L19 n=9 Tax=Petrosaviidae TaxID=1437197 RepID=I1PB45_ORYGL)

HSP 1 Score: 261 bits (667), Expect = 1.210e-83
Identity = 132/180 (73.33%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +IKKP  +HSR+R R+ H AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++Y++ KGN+FKN+RVLMESIHK+KAEKAR K +++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180          
BLAST of Ggra1065.t1 vs. uniprot
Match: A0A804NH76 (Ribosomal protein L19 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A804NH76_MAIZE)

HSP 1 Score: 260 bits (665), Expect = 1.850e-83
Identity = 132/180 (73.33%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKAIAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  VHSR+R R+ H AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++Y++ KGN+FKN+RVLMESIHK+KAEKAR K +++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIRKPQKVHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180          
The following BLAST results are available for this feature:
BLAST of Ggra1065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR156.420e-11191.67Ribosomal protein L19 n=1 Tax=Gracilariopsis chord... [more]
R7QQ261.360e-10591.35Ribosomal protein L19 n=1 Tax=Chondrus crispus Tax... [more]
A0A1X6NS041.470e-9280.32Ribosomal protein L19 n=1 Tax=Porphyra umbilicalis... [more]
A0A6P5G9L54.670e-8475.56Ribosomal protein L19 n=5 Tax=Ananas comosus TaxID... [more]
A0A7N0UKL05.350e-8473.89Ribosomal protein L19 n=1 Tax=Kalanchoe fedtschenk... [more]
A0A061RHP35.980e-8471.94Ribosomal protein L19 n=1 Tax=Tetraselmis sp. GSL0... [more]
A0A383VDY66.620e-8475.56Ribosomal protein L19 n=2 Tax=Scenedesmaceae TaxID... [more]
S8E6498.850e-8472.68Ribosomal protein L19 (Fragment) n=3 Tax=Pentapeta... [more]
I1PB451.210e-8373.33Ribosomal protein L19 n=9 Tax=Petrosaviidae TaxID=... [more]
A0A804NH761.850e-8373.33Ribosomal protein L19 n=2 Tax=Mesangiospermae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..181
NoneNo IPR availableGENE3D1.10.1200.240coord: 57..191
e-value: 1.5E-54
score: 185.7
NoneNo IPR availablePANTHERPTHR10722:SF560S RIBOSOMAL PROTEIN L19-2coord: 1..191
IPR000196Ribosomal protein L19/L19eSMARTSM01416Ribosomal_L19e_2coord: 3..146
e-value: 8.7E-92
score: 320.9
IPR000196Ribosomal protein L19/L19ePFAMPF01280Ribosomal_L19ecoord: 4..146
e-value: 7.0E-60
score: 201.2
IPR015972Ribosomal protein L19/L19e, domain 1GENE3D1.10.1650.10coord: 1..56
e-value: 1.7E-29
score: 103.5
IPR03954760S ribosomal protein L19PANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 1..191
IPR023638Ribosomal protein L19/L19e conserved sitePROSITEPS00526RIBOSOMAL_L19Ecoord: 7..26
IPR033935Ribosomal protein L19, eukaryoticCDDcd01417Ribosomal_L19e_Ecoord: 4..166
e-value: 1.57064E-96
score: 282.316
IPR035970Ribosomal protein L19/L19e superfamilySUPERFAMILY48140Ribosomal protein L19 (L19e)coord: 3..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:90828..94956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1065.t1Ggra1065.t1Gracilaria gracilis GNS1m malemRNAtig00000868_pilon 90828..94956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1065.t1 ID=Ggra1065.t1|Name=Ggra1065.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=367bp
MVSLKLQKRLAASVLGCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLV
IKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQR
VLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKA
RSKAIAEQFEARRLKNRAARERKAARLEERRKQEGVARVATSIRSALKQV
FRAAGHLHSAISPMEQGFGLGARAMILLLSVAGRNQLLDPRYQRSFDDAE
HLLGLAQGVSSSKGNIFKVRDGNFAEQQLELCVARTQLMKRVIEETEENG
ISSGEEMDSNNFFVSDPLLPRCRHNPLHAVPLRNLKKHELSCPSNPEKRR
RAKEEEFQYSYMAPAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000196Ribosomal_L19/L19e
IPR015972Ribosomal_L19/L19e_dom1
IPR039547RPL19
IPR023638Ribosomal_L19/L19e_CS
IPR033935Ribosomal_L19_euka
IPR03597060S_ribosomal_L19/L19e_sf