Ggra7558.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7558.t1
Unique NameGgra7558.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1009
Homology
The following BLAST results are available for this feature:
BLAST of Ggra7558.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..796
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 685..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..342
IPR042617CST complex subunit CTC1-likePANTHERPTHR14865CST COMPLEX SUBUNIT CTC1coord: 67..427

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:58507..61693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7558.t1Ggra7558.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 58507..61693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7558.t1 ID=Ggra7558.t1|Name=Ggra7558.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1009bp
MPAPLHASVRAALPDAAARRRLLAHVAPSASSHPLLKLCAVRQAAAKRAA
LALAPSSQPPSPPTTTTTTPTTTTTTTPPHHRHPLFDAAASTTRSPDGAC
ETLWLCVLLVAQLTSNRAGDLQLLTPTGCVPVLIAPPPSARLRNALVYVA
DWRYVAPAGHFEALLRDVHALTPPEQPPPYRPISARLVAPRGLQRVNLAG
VVSAKTPIIAHATPDACFLLELRARRVAVTLVFCADAVKWWPYIHAQRHI
MVSNLRVTQMQSYQQRHVLRARKSSVVYTVAPCADEQRQQSPAPEQSPAP
EQSPAPEQSPAPEQSPAPEQPPAPEQPPNKRARVAPHAAELRVRTRQAPK
LVTYEGHVSDVHSNGTITLDGTITLHLGPSQPQTLVAALRKGATIEVQGA
RVIRSAQGVALFATARCTIFVLYFGEVFANSAKLVRKASCWALLWMRWRS
TYIAWAYDLYVALWNKFGAWFGLGAAQLERCLLGGRDETGLVQYVMHVHS
GWAQALKVGGCERRNFYEEFMQGAVAEREQDEVKRWFVPTIGEVVKGIDG
LWKQFLRSEAAEEELEHVEETESKTRMFGRGELYDMLVRNRHGRAIGGGE
QGRVALVGRLQCESDGRDAVLHLSDCSGDVEVVCVGSVQACMVEAIVSVQ
EFDIVVKRCMTGEAHSWTTVVFRAEDVKVLVDGAHVHEEGTGSSESGRRE
SACRQLTQRLHDGDGGGGGGDDGEDDDSVQAVAVQRDDGVQLCVLVEEVR
FHAAQLTVEGRLLAFRRGERGAWHALLGGEEEDDDDDERGQRRQQLGQLP
SAAISVSGRAFVALCAATLEHGGVYALRCTALDDACDGARVRALVRALAE
AARQRAHRQLYDVYDAAHGAHAERDGGAGGGGAHERRRRRGSTRATLLDW
RLGAFDAQLLLLRPHARLLRARAARAPRWRCHHVRAARAAHGALLLVATR
STRARVLRVHARARALPALRHALSALPARAWLAQLRADAGAGAAAAGARA
RARAELCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042617CTC1-like