Ggra9321.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9321.t1
Unique Name	Ggra9321.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	532

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000863_pilon	contig	tig00000863_pilon:642151..646073 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	1463856.JOHY01000001_gene369
PFAMs	ART,Macro
Max annot lvl	201174\|Actinobacteria
Evalue	5.89e-35
EggNOG OGs	COG0692@1\|root,COG0692@2\|Bacteria,2GK8W@201174\|Actinobacteria
Description	NAD:arginine ADP-ribosyltransferase
COG category	L

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9321	Ggra9321	Gracilaria gracilis GNS1m male	gene	tig00000863_pilon 642151..646073 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1	Ggra9321.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000863_pilon 642151..646073 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1.stop1	Ggra9321.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000863_pilon 642151..642153 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1.CDS1	Ggra9321.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000863_pilon 642151..642849 -
Ggra9321.t1.CDS2	Ggra9321.t1.CDS2	Gracilaria gracilis GNS1m male	CDS	tig00000863_pilon 645177..646073 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1.exon1	Ggra9321.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000863_pilon 642151..642849 -
Ggra9321.t1.exon2	Ggra9321.t1.exon2	Gracilaria gracilis GNS1m male	exon	tig00000863_pilon 645177..646073 -

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1.intron1	Ggra9321.t1.intron1	Gracilaria gracilis GNS1m male	intron	tig00000863_pilon 642850..645176 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9321.t1.start1	Ggra9321.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000863_pilon 646071..646073 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000863_pilon:642151..646073-
coding sequence from alignment at tig00000863_pilon:642151..646073-

mRNA sequence

>Ggra9321.t1 ID=Ggra9321.t1|Name=Ggra9321.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=532bp
MESVAHRDHVLYQSIPSPPGNTASSAQFSNEQVRLNANSAPLFRRLRSLL
ALVVVLSISAFVASRTGLIERHTRSRVSHFYPAWSPKLHFARHIGLTNYG
VLSSPSRRSYAKRVNPYSSIFKSFVHNDASAVEDFVLDEMVPTGQCSART
KCRARLTVVKNGSQVVIKAGYYIYTQDGIIRSVDGGTKSRLTGTTHAQAL
QWATELLEGASARLAQVNATIIVEEIAEAILDGRDVVLTCAETGDPRCDA
TEVIQEYTIAEAKQVDPCTDFVKSTAGVKTLAELQSECPTAEFYYNRVGA
AAMAKYGVRKDAKLKGLKALISDKRVVSPPPWFQSMISQGILFLNASFTT
GGTISNSDHNAFWLPVLRCIIEQILLAKSRLPASDKRRGLVISWWSGKAK
RAKSPVGTAVRKFSNVPVRIIDWHSPGARGGQFCQDTPHFTIVNQKLNER
VMKAIGWLPTEFELERRGLEPAALRDFILKTREWHTTYLGRLKGELEFED
GIEPITGVRDMPLLPRPQVYSPFLSHPSKSD*

spliced messenger RNA

>Ggra9321.t1 ID=Ggra9321.t1|Name=Ggra9321.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1596bp|location=Sequence derived from alignment at tig00000863_pilon:642151..646073- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAATCTGTCGCCCACCGAGATCATGTTCTATACCAATCCATCCCATC
CCCTCCCGGCAATACCGCTTCTTCTGCACAGTTTTCAAACGAGCAAGTGA
GGCTTAATGCCAACTCTGCTCCGCTCTTTCGCCGTCTTCGAAGCCTGCTT
GCACTGGTTGTAGTGCTGTCGATATCGGCGTTTGTCGCCAGCAGAACAGG
CCTCATCGAACGTCACACCCGCTCTCGTGTATCACACTTCTACCCCGCCT
GGTCGCCAAAGCTTCACTTTGCTCGTCATATCGGTCTCACCAACTATGGA
GTACTGTCGTCACCTTCGCGCCGGAGCTATGCCAAACGTGTCAATCCGTA
CAGCTCCATCTTTAAATCATTTGTTCACAACGACGCTTCTGCTGTCGAAG
ACTTTGTTTTGGATGAGATGGTTCCAACAGGGCAGTGCAGCGCCAGAACA
AAGTGCAGAGCACGATTGACTGTGGTAAAAAATGGTTCCCAAGTTGTGAT
CAAGGCCGGCTACTACATCTACACCCAAGATGGAATAATTCGCTCTGTTG
ATGGAGGAACCAAATCGAGGTTGACGGGGACTACCCATGCCCAAGCTCTC
CAGTGGGCGACTGAGCTGCTTGAGGGCGCCAGCGCTCGTCTGGCACAAGT
TAATGCCACTATCATCGTGGAGGAGATAGCGGAAGCAATCTTGGATGGGA
GAGATGTCGTGCTCACCTGTGCAGAAACCGGTGACCCTCGTTGTGATGCA
ACAGAGGTGATCCAGGAGTACACCATTGCAGAGGCGAAGCAAGTGGACCC
GTGCACGGATTTTGTTAAATCTACTGCAGGAGTGAAAACTTTGGCGGAGC
TGCAGAGTGAATGCCCGACGGCCGAGTTTTATTACAACAGAGTCGGGGCA
GCTGCGATGGCAAAGTATGGCGTCAGAAAGGATGCCAAACTGAAGGGCTT
GAAAGCCCTGATATCTGACAAGAGAGTGGTTTCACCACCACCATGGTTTC
AGAGCATGATTTCGCAAGGAATACTATTTCTCAATGCTTCCTTTACAACA
GGCGGTACAATTTCCAACTCAGATCATAATGCGTTCTGGCTCCCGGTACT
CAGATGCATCATTGAACAAATCTTGTTGGCCAAATCTCGGTTACCGGCAT
CTGACAAGCGCCGGGGGTTAGTGATTTCCTGGTGGAGCGGTAAAGCGAAG
CGTGCAAAGTCCCCTGTTGGAACTGCAGTGAGAAAATTCTCGAATGTACC
AGTAAGAATCATCGATTGGCACAGCCCTGGTGCTCGAGGAGGTCAGTTCT
GCCAAGACACTCCGCATTTCACCATTGTCAACCAGAAACTGAATGAGCGG
GTAATGAAAGCTATAGGCTGGCTTCCCACTGAATTTGAGCTTGAAAGGAG
AGGTCTTGAGCCAGCGGCTCTGCGGGATTTCATCCTAAAGACAAGGGAAT
GGCACACAACGTATCTCGGAAGGCTGAAAGGTGAGCTGGAATTTGAGGAT
GGAATAGAGCCGATAACTGGGGTACGTGATATGCCATTACTACCGAGACC
CCAAGTCTACTCGCCGTTTCTTTCCCACCCCTCAAAGAGCGATTAA

protein sequence of Ggra9321.t1

>Ggra9321.t1 ID=Ggra9321.t1|Name=Ggra9321.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=532bp
MESVAHRDHVLYQSIPSPPGNTASSAQFSNEQVRLNANSAPLFRRLRSLL
ALVVVLSISAFVASRTGLIERHTRSRVSHFYPAWSPKLHFARHIGLTNYG
VLSSPSRRSYAKRVNPYSSIFKSFVHNDASAVEDFVLDEMVPTGQCSART
KCRARLTVVKNGSQVVIKAGYYIYTQDGIIRSVDGGTKSRLTGTTHAQAL
QWATELLEGASARLAQVNATIIVEEIAEAILDGRDVVLTCAETGDPRCDA
TEVIQEYTIAEAKQVDPCTDFVKSTAGVKTLAELQSECPTAEFYYNRVGA
AAMAKYGVRKDAKLKGLKALISDKRVVSPPPWFQSMISQGILFLNASFTT
GGTISNSDHNAFWLPVLRCIIEQILLAKSRLPASDKRRGLVISWWSGKAK
RAKSPVGTAVRKFSNVPVRIIDWHSPGARGGQFCQDTPHFTIVNQKLNER
VMKAIGWLPTEFELERRGLEPAALRDFILKTREWHTTYLGRLKGELEFED
GIEPITGVRDMPLLPRPQVYSPFLSHPSKSD*

mRNA from alignment at tig00000863_pilon:642151..646073-

Legend: polypeptideCDSexonstart_codonintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9321.t1 ID=Ggra9321.t1|Name=Ggra9321.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3923bp|location=Sequence derived from alignment at tig00000863_pilon:642151..646073- (Gracilaria gracilis GNS1m male)
ATGGAATCTGTCGCCCACCGAGATCATGTTCTATACCAATCCATCCCATC
CCCTCCCGGCAATACCGCTTCTTCTGCACAGTTTTCAAACGAGCAAGTGA
GGCTTAATGCCAACTCTGCTCCGCTCTTTCGCCGTCTTCGAAGCCTGCTT
GCACTGGTTGTAGTGCTGTCGATATCGGCGTTTGTCGCCAGCAGAACAGG
CCTCATCGAACGTCACACCCGCTCTCGTGTATCACACTTCTACCCCGCCT
GGTCGCCAAAGCTTCACTTTGCTCGTCATATCGGTCTCACCAACTATGGA
GTACTGTCGTCACCTTCGCGCCGGAGCTATGCCAAACGTGTCAATCCGTA
CAGCTCCATCTTTAAATCATTTGTTCACAACGACGCTTCTGCTGTCGAAG
ACTTTGTTTTGGATGAGATGGTTCCAACAGGGCAGTGCAGCGCCAGAACA
AAGTGCAGAGCACGATTGACTGTGGTAAAAAATGGTTCCCAAGTTGTGAT
CAAGGCCGGCTACTACATCTACACCCAAGATGGAATAATTCGCTCTGTTG
ATGGAGGAACCAAATCGAGGTTGACGGGGACTACCCATGCCCAAGCTCTC
CAGTGGGCGACTGAGCTGCTTGAGGGCGCCAGCGCTCGTCTGGCACAAGT
TAATGCCACTATCATCGTGGAGGAGATAGCGGAAGCAATCTTGGATGGGA
GAGATGTCGTGCTCACCTGTGCAGAAACCGGTGACCCTCGTTGTGATGCA
ACAGAGGTGATCCAGGAGTACACCATTGCAGAGGCGAAGCAAGTGGACCC
GTGCACGGATTTTGTTAAATCTACTGCAGGAGTGAAAACTTTGGCGGAGC
TGCAGAGTGAATGCCCGACGGCCGAGTTTTATTACAACAGAGTCGGGGTT
TCTCTTCCTGTGTGTATAACTGAGTGCAGTTCCAATCCAGGTGTGGATCA
CGCTGTGTATATGGATTTCTACGTGCAATCAAACCCGCTATCGGCTAACA
AAGCGGATTGTGTTTCTGCCTCTGTTGTTGCGGCGTACCAGTATTTTTTG
TCTTCACTTCCGGCATGTGATTCTGTGTCATCTGGAAATGTATATGAAAG
GAGATACATAGCGAGTCTGGCGAGTAAATATGATGACACCGTCCCAGAAG
AACTGAAGGATTTTGCCCAATTGCACGGATGCGAATTGACTTACGCTTTC
ATTTCTGGTCTAGGAAATTCGTTTGAGAGCGTTGTTGATGCTAGCTGTGC
GGCTTCGTAGTGGGGCGACGATAAAAGAGGGCAATGAAACCCGCATGAGG
AAATGGACGCGTTTGGGGTGGTTAGTAGTATGAAATTAGAGAACAAGTAG
CGCCATTGCTTGACCCAAAGAGAAGCAGACGTGTCGTTTGGCTTCCTTTG
GCGAAGTGCAAAAAGTGGCCTCGAGCTGCACTTTGATGAGTGAATAAATG
GCTGCTGTCACTCGCCACGACTATCGCCACCCTCCGATTCATATTTCATC
AAGTCTGCAGCGCTGATGCTTGGAGGCGTAGCGTAGCGTATGGGGGCATG
ACAACGCCAACGTGGCGAGAGCGATGGTTGATGACAGAAGAGAACTCAGC
TCAAGCTGCATCCAGCGCGATGTCGCGCAAGGGACCTTTCGTCAGATCGA
CTGCGCCGGAGGTCCACCAGTGGCACGCAGGCCCGTCCGCCGCGGTGCCG
ATCCAGCGAGTGGCTGCCGATTCGGCCGACACCCGACAACGTGTCCACGG
TGATGACGTATCACAAGACGCTTCGCATGTGCGACGTGGCGGCGCACGTG
GCCACGCACAACACGTCCGTCGCGCCTTGCGCGTGTGTCGTTCTGTCCAG
CAACCATCCTGAACACCTCAAAGAGGGAGCATATGCAGCGATGCCACTTG
CGGATAAGGGGAGAAGGGAGAGGCAATGAGCTTCAGCGAGACGCCTGGTG
CTCTAATTTCTTTTGCTTGGCATCAACATCACACCATCATCCTTCTTCGA
GTTAAATAACCGTTCGCCGAGGCGTGCGTGCCAGCCAAATGGCCGCACCG
ATCGTTGGTCAGTGTCCCATCTTGATTTGCACCTTTCGACTTGGTATCAC
CGAAATGATCGTCTGCACTTTTACCCATTAATGCAACCTACAGACAGTAC
TGTCAACACTGGCATACTTCAACACTGGCATACTTCACTTTGGCCCAGTA
CTATAATATAATATATACCATATATTATATGTTCTAAGAACGATAGAATT
GTCGCAGACGTAGTGGTTTATCCACCATACCATGTACCTTGTCGCATTCG
GTTTTGGCGTTGCTCACTTGGAAGCAACCCTTTCTTCATACATTTCCAAT
TGACACGGATGCTCCTCTTCAAGCTTCCAACATCGTGAGAAGAATGAGAT
CTTTCTCACATTTTCTGCTCACTGCAAAATATTTCCGAGTTTGAACCTTG
ACAACCACTTGTTGTGGCTTGTAAAAAGAATGCCTTACTTGAGCAGAAGT
TCTACCCCACCTTCACCTCCTACTACGCTAAGCTTCATCCATTGTTCCAC
AAAAAAAAGTACATCTAACAGCAAACTGTGCTTCTGCGGCTCGCAATGGA
GTGGGAGTACGAGTTACCTTCAGACGAGAACGGCGTTTGCCAGTGGCATA
AATTCACAGCACAGTTCTTGGAACAGCTTACCACAAGCTATCAAGACTTA
TGTAGCAACAGATCTTGTTCAAAATCATTCCGTATTACCATTGGAGAACG
GCACTACAAAACCGACTACACAAACTTCACCCGCACGAATGTGTCCACAA
AAGTAGTTCGAAACATACCTCATTTTGATTCATCCTTATCTCTGACGTGC
ATACTTGGCGGTGTCTTTAAGTGAGAGAGAGTTCTGACCAGCCTCATCAA
TTGCTTAGAGGATGCGTCAGTTTTCGTTGGGGAAGAAAGAGATCATCATA
TTGCTCCGATGAGGGAGCTCACTTTCCAATCACTCAAACCGTTATCACCA
GAGAACTGGAATGTAATCTTCATCGCGCAACAACCGGTAAAGTTACTCCT
CGCCTCATTGACATTGCAATATACAACAAAGTTGACTAACTTGATCTGTT
TCTTGAGTGTCAACAGTCCGAATCACTGCAGTCTGCCACATGTGTGCCCA
TGTTCGACCCGACACTTGAGCATTGAAATGATGAAATGTTGGGATTAATG
ACGTCCATGCGATCCATTTTGAAGGCAGCTGCGATGGCAAAGTATGGCGT
CAGAAAGGATGCCAAACTGAAGGGCTTGAAAGCCCTGATATCTGACAAGA
GAGTGGTTTCACCACCACCATGGTTTCAGAGCATGATTTCGCAAGGAATA
CTATTTCTCAATGCTTCCTTTACAACAGGCGGTACAATTTCCAACTCAGA
TCATAATGCGTTCTGGCTCCCGGTACTCAGATGCATCATTGAACAAATCT
TGTTGGCCAAATCTCGGTTACCGGCATCTGACAAGCGCCGGGGGTTAGTG
ATTTCCTGGTGGAGCGGTAAAGCGAAGCGTGCAAAGTCCCCTGTTGGAAC
TGCAGTGAGAAAATTCTCGAATGTACCAGTAAGAATCATCGATTGGCACA
GCCCTGGTGCTCGAGGAGGTCAGTTCTGCCAAGACACTCCGCATTTCACC
ATTGTCAACCAGAAACTGAATGAGCGGGTAATGAAAGCTATAGGCTGGCT
TCCCACTGAATTTGAGCTTGAAAGGAGAGGTCTTGAGCCAGCGGCTCTGC
GGGATTTCATCCTAAAGACAAGGGAATGGCACACAACGTATCTCGGAAGG
CTGAAAGGTGAGCTGGAATTTGAGGATGGAATAGAGCCGATAACTGGGGT
ACGTGATATGCCATTACTACCGAGACCCCAAGTCTACTCGCCGTTTCTTT
CCCACCCCTCAAAGAGCGATTAA

Coding sequence (CDS) from alignment at tig00000863_pilon:642151..646073-

>Ggra9321.t1 ID=Ggra9321.t1|Name=Ggra9321.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1596bp|location=Sequence derived from alignment at tig00000863_pilon:642151..646073- (Gracilaria gracilis GNS1m male)
ATGGAATCTGTCGCCCACCGAGATCATGTTCTATACCAATCCATCCCATC
CCCTCCCGGCAATACCGCTTCTTCTGCACAGTTTTCAAACGAGCAAGTGA
GGCTTAATGCCAACTCTGCTCCGCTCTTTCGCCGTCTTCGAAGCCTGCTT
GCACTGGTTGTAGTGCTGTCGATATCGGCGTTTGTCGCCAGCAGAACAGG
CCTCATCGAACGTCACACCCGCTCTCGTGTATCACACTTCTACCCCGCCT
GGTCGCCAAAGCTTCACTTTGCTCGTCATATCGGTCTCACCAACTATGGA
GTACTGTCGTCACCTTCGCGCCGGAGCTATGCCAAACGTGTCAATCCGTA
CAGCTCCATCTTTAAATCATTTGTTCACAACGACGCTTCTGCTGTCGAAG
ACTTTGTTTTGGATGAGATGGTTCCAACAGGGCAGTGCAGCGCCAGAACA
AAGTGCAGAGCACGATTGACTGTGGTAAAAAATGGTTCCCAAGTTGTGAT
CAAGGCCGGCTACTACATCTACACCCAAGATGGAATAATTCGCTCTGTTG
ATGGAGGAACCAAATCGAGGTTGACGGGGACTACCCATGCCCAAGCTCTC
CAGTGGGCGACTGAGCTGCTTGAGGGCGCCAGCGCTCGTCTGGCACAAGT
TAATGCCACTATCATCGTGGAGGAGATAGCGGAAGCAATCTTGGATGGGA
GAGATGTCGTGCTCACCTGTGCAGAAACCGGTGACCCTCGTTGTGATGCA
ACAGAGGTGATCCAGGAGTACACCATTGCAGAGGCGAAGCAAGTGGACCC
GTGCACGGATTTTGTTAAATCTACTGCAGGAGTGAAAACTTTGGCGGAGC
TGCAGAGTGAATGCCCGACGGCCGAGTTTTATTACAACAGAGTCGGGGCA
GCTGCGATGGCAAAGTATGGCGTCAGAAAGGATGCCAAACTGAAGGGCTT
GAAAGCCCTGATATCTGACAAGAGAGTGGTTTCACCACCACCATGGTTTC
AGAGCATGATTTCGCAAGGAATACTATTTCTCAATGCTTCCTTTACAACA
GGCGGTACAATTTCCAACTCAGATCATAATGCGTTCTGGCTCCCGGTACT
CAGATGCATCATTGAACAAATCTTGTTGGCCAAATCTCGGTTACCGGCAT
CTGACAAGCGCCGGGGGTTAGTGATTTCCTGGTGGAGCGGTAAAGCGAAG
CGTGCAAAGTCCCCTGTTGGAACTGCAGTGAGAAAATTCTCGAATGTACC
AGTAAGAATCATCGATTGGCACAGCCCTGGTGCTCGAGGAGGTCAGTTCT
GCCAAGACACTCCGCATTTCACCATTGTCAACCAGAAACTGAATGAGCGG
GTAATGAAAGCTATAGGCTGGCTTCCCACTGAATTTGAGCTTGAAAGGAG
AGGTCTTGAGCCAGCGGCTCTGCGGGATTTCATCCTAAAGACAAGGGAAT
GGCACACAACGTATCTCGGAAGGCTGAAAGGTGAGCTGGAATTTGAGGAT
GGAATAGAGCCGATAACTGGGGTACGTGATATGCCATTACTACCGAGACC
CCAAGTCTACTCGCCGTTTCTTTCCCACCCCTCAAAGAGCGATTAA