|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9334.t1.stop1 | Ggra9334.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000863_pilon 950279..950281 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9334.t1.start1 | Ggra9334.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000863_pilon 956823..956825 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9334.t1 ID=Ggra9334.t1|Name=Ggra9334.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=408bp MTIPQQSKTHLIPNVLPNTNADQMQDVLVVGVATGNETAEVVRKESTPLN SSQVQGPSSSSYSLGINGLMRAYQGRDKYSGRCDEDISSAFLLYETLSRV CHLSEQEKAEALPVMLKEEALPYYTRVYRPDDTFDAVRQKLFDLYTSEEQ QARTFTGDEDTTLVAILDANWYARRVSGILFEIVLEVQASMIDEGNDSFK IACVRVVKKLSRELPHDQARWMRILLELEELPDWDTCGLSIDSNRVRHAD ELTDRASRGTNSARLKLGDGILVGEETSVKRLYYRGGGLGVGSTSAAVNS ALEPAMTNEEELLSDLIAGRCDRKGQTAIAFWAVAAISKGQIKVSRKSRA WCRAFSDSGPTAGGHAALELKYDARGLEFWETTGNEVSDVTVAESKKGVM KVDAVMR* back to topspliced messenger RNA >Ggra9334.t1 ID=Ggra9334.t1|Name=Ggra9334.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1224bp|location=Sequence derived from alignment at tig00000863_pilon:950279..956825- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACCATTCCACAGCAGTCCAAGACACACCTGATCCCCAACGTGCTACC GAACACCAACGCAGATCAAATGCAGGACGTACTGGTAGTGGGCGTAGCGA CAGGTAATGAAACGGCAGAAGTTGTTAGGAAGGAATCTACTCCGTTGAAC TCGTCTCAAGTGCAAGGACCAAGCTCCAGCAGCTATTCTCTTGGCATCAA CGGCTTGATGCGGGCCTATCAAGGACGTGACAAGTACAGTGGTCGCTGTG ACGAGGACATTTCGTCCGCGTTTCTACTGTACGAAACTTTGTCCCGTGTT TGCCATCTAAGCGAACAGGAAAAGGCTGAAGCACTCCCTGTCATGCTCAA GGAAGAGGCTCTGCCGTATTACACGCGTGTATATCGCCCCGATGATACCT TCGATGCTGTTCGTCAGAAATTATTCGACTTGTATACGAGTGAAGAGCAA CAAGCTCGCACGTTTACCGGGGACGAGGATACAACGCTAGTAGCAATTCT CGACGCTAATTGGTATGCCAGGCGTGTAAGTGGCATACTGTTCGAAATCG TTCTGGAGGTCCAAGCCTCAATGATCGATGAAGGAAATGATTCGTTTAAA ATTGCTTGCGTGCGTGTTGTGAAGAAGTTGAGCAGAGAGTTGCCACATGA CCAGGCAAGGTGGATGCGGATTCTGCTAGAACTGGAAGAGCTACCCGACT GGGACACATGCGGTCTGAGCATAGACAGCAATCGAGTAAGGCATGCAGAT GAACTGACAGACCGGGCGTCGAGGGGAACGAATTCTGCACGCCTAAAATT AGGAGATGGCATTCTTGTCGGAGAAGAGACATCTGTGAAGAGATTGTACT ACCGTGGTGGAGGCCTTGGGGTGGGTTCTACAAGCGCAGCTGTAAATAGT GCCTTGGAACCTGCCATGACGAACGAAGAAGAGCTATTGTCCGACTTGAT AGCCGGGCGATGTGACCGGAAGGGACAGACAGCTATAGCTTTTTGGGCGG TGGCGGCTATTTCGAAGGGTCAGATCAAAGTTTCGAGGAAGAGCCGCGCA TGGTGTCGTGCCTTTTCGGACAGCGGGCCAACGGCGGGGGGGCATGCTGC TCTAGAATTGAAGTACGATGCACGCGGGTTGGAATTCTGGGAGACCACTG GCAACGAGGTTTCGGACGTGACGGTTGCGGAGTCGAAAAAGGGGGTGATG AAGGTAGACGCAGTTATGAGATAA back to topprotein sequence of Ggra9334.t1 >Ggra9334.t1 ID=Ggra9334.t1|Name=Ggra9334.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=408bp
MTIPQQSKTHLIPNVLPNTNADQMQDVLVVGVATGNETAEVVRKESTPLN SSQVQGPSSSSYSLGINGLMRAYQGRDKYSGRCDEDISSAFLLYETLSRV CHLSEQEKAEALPVMLKEEALPYYTRVYRPDDTFDAVRQKLFDLYTSEEQ QARTFTGDEDTTLVAILDANWYARRVSGILFEIVLEVQASMIDEGNDSFK IACVRVVKKLSRELPHDQARWMRILLELEELPDWDTCGLSIDSNRVRHAD ELTDRASRGTNSARLKLGDGILVGEETSVKRLYYRGGGLGVGSTSAAVNS ALEPAMTNEEELLSDLIAGRCDRKGQTAIAFWAVAAISKGQIKVSRKSRA WCRAFSDSGPTAGGHAALELKYDARGLEFWETTGNEVSDVTVAESKKGVM KVDAVMR* back to topmRNA from alignment at tig00000863_pilon:950279..956825- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9334.t1 ID=Ggra9334.t1|Name=Ggra9334.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=6547bp|location=Sequence derived from alignment at tig00000863_pilon:950279..956825- (Gracilaria gracilis GNS1m male) ATGACCATTCCACAGCAGTCCAAGACACACCTGATCCCCAACGTGCTACC
GAACACCAACGCAGATCAAATGCAGGACGTACTGGTAGTGGGCGTAGCGA
CAGGTAATGAAACGGCAGAAGTTGTTAGGAAGGAATCTACTCCGTTGAAC
TCGTCTCAAGTGCAAGGACCAAGCTCCAGCAGCTATTCTCTTGGCATCAA
CGGCTTGATGCGGGCCTATCAAGGACGTGACAAGTACAGTGGTCGCTGTG
ACGAGGACATTTCGTCCGCGTTTCTACTGTACGAAACTTTGTCCCGTGTT
TGCCATCTAAGCGAACAGGAAAAGGCTGAAGCACTCCCTGTCATGCTCAA
GGAAGAGGCTCTGCCGTATTACACGCGTGTATATCGCCCCGATGATACCT
TCGATGCTGTTCGTCAGAAATTATTCGACTTGTATACGAGTGAAGAGCAA
CGTAACCGTGTTCTGTTACAGTGGCAAACGATGAAGCTTTCCGACGCGAT
GAAGGAAGACGCCGAGAAGAGTGAAGCAGAGGTGTTCCGAGCTTTCTCAT
TCAAACTTTCTACACTTCAGAAGCAATTGTCCGCCAACTACCAGCACGAT
AATCTACTTCGAGACCAGCTTGTTATCGCTTGCGACATTGATCGCATTCA
GCAGTCGCTTCGTGAGCGCGTCCCTAAGACAGCACAGGATGCAATGAACC
GCATTGCAACTTTCCTGTCCCATGAAGCCAGATCGGCCAATTCATATGTT
TCCCAGGAGGTAGATACAGATGCAGCGCTTTACGGTCTTGGGAGAAGGTA
CGGTGGAGAAGCCAGGAAATCTTTCAACTCTCCTGGTCAATACCAACGTT
ACCGTCGCCCTCGACGATTTTCTTCCAGATGGATCAGAGGTGTGAAGGGG
TGTTATGTCTGCGGACAGGATCATAAAGCCCACACGCGTCATTCTCCGGA
AGAGGTACGTGCTGCGATCAAGCGTCTCAGGTCATCCCATCCTTCGGCAA
TGGTCAGTGTAGATGATGTCGCATACATCTCTGAACAACTGCACGATGTT
CAGGAGAGTGCTGAGAGCTCCGAAGAGGTTCAATTCTCCGACGATTCTGA
TAGTGAAGACACAGTATGTTTTGCTACAGAGGCTGGCAGTCTTGAGAAGG
ATACCGAAGTGTACCTGGCAAACTCCTCTTTTGTGCATGGTAGAACCTTT
TCTACTGATCTCAAATCTAGCATGGCAGTCATGTTCTCTGCTCTGTCAAT
GGGTAAAGCACAGCGTTTCAAGGGAATCCTCATCGATTCTTGTGCGAACC
GATCTTCCGTAATGTCTCACGCACAGTACCGCGCTTATTGCAAAGAGTTT
AATGTACCAATGCACATTGATACGGACTCACGTCGTGCAATGTTTGGCAT
AGGAGGTACAATTAACGCAGTAGGTACTGCAACGGTTCCAGTTCCTTTCA
AGGATCTTCACTTAGTGATCGACGTCAAGTTTCAGATTATGAAGGACAAT
GTGCCGTCATTACTGAGTATGAAGGACATGAAGGACAATGGTCTGGATTT
CAGCATTCAGGACGAAGTAGTGAGATTCAAGAACGCAAAGCAGGATCTCG
TTATGGAAAACTACTTCCTTGTTCACCGCTGGAAGCCTGAGGATCTTGGT
TTCGCGTTGTACACTGAGTCCGAACTTCGAAAACTTCATCGAGTGTTTGG
CCACCCTTCTGTACAAGCACTGTACAATCTCCTGAAGCGTGCCAACCCTG
ATGAAATGGAAGGCTCAGTGCGCAAGTCACTCGACGAAATTCTTCGAGAA
TGCCAGATCTGCATCCAACACGCTGCGAAGCCACGTCGTTTCAAGGTTAC
CATTGGTACAGATGACCTACGCTTCAATCACATCGTTGCTGTAGATGTCA
TGTACATCAACAGTCGTCCTGTACTGCATCTGGTGGATGAGGCTACACAC
TTCAATGCCGCGCAATTTCTCAAGAACATGACTTCGCAACTTGTGTGGAA
GACGATTCTGAAGTGTTGGAGTCGTGTCTACCTTGGTCCGCCTGATTTCC
TACACGTCGACCAAGGATCGAACTTCGTGTCCGCCGAATTGGCTGCCAAC
GCAACTGTAGATGGCGTGACCATACTCGAGGCGCCTATTGAGTCTCCCTC
GACAATGTCCCACGTCGAACGCTACCATGCACCTCTTCGTGCCGCGTACA
GCAAGATCCGCGATTCAATGCCTCGTTCTGAATCCAACGATGAATGTCTG
CAAATGGCAGTTAAAAGCGTTAACGACACCATTGGACCAGAAGGTCTTTG
CCCTACACTGTTGGTGTTTGGTGCCCTGCCACGTCCAGCCAAGAAGGGTT
GTGCGGAAACGCAGCTACAACGTGCACGAGCCATGGATGCTGCTACGAAG
GCAGTACAGAAAGAACAGGCAGCGAGAAGAATTGCCTTTGGCTTGAAGCA
TGACCATGGACCGAAACGTATTGAAGCTAGTGCAGAGTTGCGAAAGCTCC
CTGCTGGATCCCCGGTGTATGTCTATCGCGACAAAACTGAGAAATGGGAA
GGACCATTCCCCTTCATTCAGATTGATGGTGAGACTGTAGTCGTTCAGCT
CCCTAAGGGTCGCAAGATTTTTCGATCTACTGTAGTGAAACCAGTTGTCC
GTTCCCAGCTTAATGAAAGCTCTACAGTGCAGGAAGCTAGAAAGTCTGAA
GCTATGGAAGCGTAAGAGAAAGGGGAAGAAGAGAGTAGATCAATTGGGAA
AGAACAGTGTATGGTGATGTTTGGATCAACGAAGATCGTCATCGCGCCGA
CAAGCGATGCGCATTTGTTTCAGGATGCTCGTGAGAAGGAACTAGAAGGA
CTAAAGAAGAATGATACATTCAAAGTAGTAAACTTGTCATCGGTTCCGGA
AGGTCACCGCATCTATGGTACTCGATTCGTCGATGCGTACAAGACGATTA
ATGGAAACGAAGTGAAGAAGTCTCGACTTGTTGCTAAGAACTACTCCGAC
CTTCAAGCTTCAACAATTTCCACCAAGGCTCCAACCGTCAGTAGACTTGG
CCAACGTCTTACTGTGTGTCTTGCGGCATGCTTGCCACACTACACGTCAT
ACTTTCGTGACATATCACAGGCGTATGTACAGTCTGAAACTGCGCTTGAA
CGTAACATCTATTTACGTGCACCTGTGGAAATGAATCTGGGTGATGACAA
AGTACTGTTGGCCCTTAAGCCTCTCTATGGCATACCGGAGAGCGGTCTGC
ATTGGTTCCTAACCTACCAGACGCACCATAAGGATTTGCTCCACATGAAA
GCAACCAAAGTGGACCCATGCGTTTTGTACCGCAGGAAAGGAGACTACTT
AGATGGAGTTACTGCACTTCAAGTGGATGATTCGTTTGGTCATGGTTCAT
CCGGTTTTCTTGACGAAGAGGAAAAGAAGTGCCGTTTTAAGTCGAAGCCG
CGCAAGGTGGTAATGAAGAATGAAAGTGGCGTATTCAACGGGGTGCACAT
TGCCAAGGCGGAGAATGGAACATACACTATGACACAGAATGAAAAATTGG
AATCACTTAAAGCAGTTGAGAACGCTGAAGAGTTCAAAAGTGTTCGTGCA
GCAGCACAGTATATTGGCAACTGCGTTCGTCCAGATATCTGCGCTGCAGT
TCAGCTGATTGCTACAGGTTCTGATGGACCAACTCCCGATCAGATGAAGG
CTCTCAACGTTGTTGTGAAACACTGTCACTCGACCAGCAATACTGGTTTG
CGCTACGTCCCATTGGATTTGGATTCCGTTCGTTTGGTGTTACTCACAGA
CGCCTCGTTTGCTAACACTGTAGATTTGAAGTCTCAGATGGGATTTGTCC
TTCTCATGGTAGACAAATATGAACACGCCAACATACTGCACTATGGAAGC
TCGCGCTGCAAAAGAGTTGCCCGTTCTGTGATGGCAGCTGAGATACACGC
ACTAGTGTACGGGTTTGATAATGCCTACATTGCGAAGGACATGCTATCCG
AAGTACTTGGTAGAACAGTCAAGGTGGACGGTTATGTAGATTCTCGGACA
TTGTTTAATGTCATTGCGAAGAATGCTGGAACGCTTGAGAAACGTCTTCA
GATCGATGTGTGTGCTCTTCGTGAGAGCCACGAAAAAGGTGAACTACGCA
GTTTATCTTGGATACCAAGCATTCACAACATCGCCGATGCTCTTACAAAG
GCCTGTAACTGGATGGAACACGCTTTATGGAAAATGATGCAGTTCAACAC
GTTTAAAGTAGATGCAAAAGGATGGGTTCGTAAGTTCGAAGATATTTCTT
CGAAGGAGAAAAAGAGTGAGTGTGAATTATCTTAGTCGTTCCTGGAAGAG
GAGACTCTGTGACTACTGGCAATGCGTGGACGCGTACATGTGTACATATG
CATCTGTATGCTACACGATCTGCCATTGATGATAATGCTTGTCAAATGCT
TTGAAGGAATTGTGATCTATTCATTTGCGTGTAGTGCTAATGATGTATTT
AATAGATGTTGAGAGCACATAGGCTCTCTAACAGAACAACAACATCAACC
AACTACTCTACAACTGTTTTCAACTATTTGCTATTGTACGTCCGCGCTCT
TCGCGCCTGCCGTGCTACCTCGCATCTGCTTGTCCCGTTTGGACCTCAGC
AGTGCATTCCGGACTACCGCGCCCGCGCGCCTGTGGTCTGAAACCTCGGC
CGTTTGATAGTACCTAGGAACGGATACGCAAGAATTGTTTACACCTTTTG
GTATGGCTCGGTATTATCAAGGTGGATGTCTCTCTTCGTGTTGATCCACC
TTGCAGGCAAGGCGATCTTGACAGCAGTTGCACCTCCAAAAGCTACTTGA
TTTGAGTGGTTCTTGTGGGAGTTACATTGCGTGCGTCTTAAGAAGATGGG
GAAATACAGCGTTGTGGATATCCAGGATATTCTACAATGATGCAAGCAGG
ATGCGAATATGTGCAAATGCGTGGTTCCGTAATTTATTTCGACGAATGGT
CTTTTGCATATGCGAACAGAAAGGCGCAAGGACGAGATCTTTCGTGATCT
ACAGTAGCAAGTTAGTTCCTCCTAGCTTTATTCCGTTCGTACTAAAGTAA
ACTGAGTTGAAGGCACGGACGCTTAGATGAAGCTGTCCATACCCTCCAGC
ACCAATTTGAAGTAAGCTGGGTTGCTAAATGCAAATTGCACGCAAGCAAC
CCACGCAGATTCAAGTTTGAATCAGAAGCACTGCCACCTACGAATCGTAG
GTGGCAGGTTGAGAACGTCTACTTAATAAACAATTCCAGACTCTCCACAG
GAGGTCTCGGGGCATCCGCATCACCGCGGAACTACCTTTGTGCCCGATCT
CTTGCCTTTGCGTGCTCCTTTCTTTTCCGTAGCGCGAGCCCGTGGCGATG
ACAAACCTAGACGGACCAACACTTCGTGAAAGATAGAATCAATACCGAGC
AGCATCGGCTGTTCTCGTTGGGCATGATCCCATGAGCGAAATAATTCTTC
TTCTCGCCAATCTCTCAGAGGGCATAGGACAGAAGCAGCCCATCAGCTCA
GAAAATGCAATGTGAATTGTGATTTGGGCCTGCTTCATTATAGAAGCTCG
CACGTTTACCGGGGACGAGGATACAACGCTAGTAGCAATTCTCGACGCTA
ATTGGTATGCCAGGCGTGTAAGTGGCATACTGTTCGAAATCGTTCTGGAG
GTCCAAGCCTCAATGATCGATGAAGGAAATGATTCGTTTAAAATTGCTTG
CGTGCGTGTTGTGAAGAAGTTGAGCAGAGAGTTGCCACATGACCAGGCAA
GGTGGATGCGGATTCTGCTAGAACTGGAAGAGCTACCCGACTGGGACACA
TGCGGTCTGAGCATAGACAGCAATCGAGTAAGGCATGCAGATGAACTGAC
AGACCGGGCGTCGAGGGGAACGAATTCTGCACGCCTAAAATTAGGAGATG
GCATTCTTGTCGGAGAAGAGAGTACGAGGGCGATCAAATTCAAACACTAG
GAATCTGGACAGAGATACATGGTGACTTGCAAGAACGGTGAATTTGTCTC
GCGTAAAATTGGTTCTATAGCATCTGTGAAGAGATTGTACTACCGTGGTG
GAGGCCTTGGGGTGGGTTCTACAAGCGCAGCTGTAAATAGTGCCTTGGAA
CCTGCCATGACGAACGAAGAAGAGCTATTGTCCGACTTGATAGCCGGGCG
ATGTGACCGGAAGGGACAGACAGCTATAGCTTTTTGGGCGGTGGCGGCTA
TTTCGAAGGGTCAGATCAAAGTTTCGAGGAAGAGCCGCGCATGGTGTCGT
GCCTTTTCGGACAGCGGGCCAACGGTGCGCGGCGAGATACCAGCCGCATT
GGCAAAGAGGTTTCTGCTTGGAGAAAGTGCGAATAAAACGTTTCTATGGA
TGATAGGCGGGGGGGCATGCTGCTCTAGAATTGAAGTACGATGCACGCGG
GTTGGAATTCTGGGAGACCACTGGCAACGAGGTTTCGGACGTGACGGTTG
CGGAGTCGAAAAAGGGGGTGATGAAGGTAGACGCAGTTATGAGATAA back to topCoding sequence (CDS) from alignment at tig00000863_pilon:950279..956825- >Ggra9334.t1 ID=Ggra9334.t1|Name=Ggra9334.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1224bp|location=Sequence derived from alignment at tig00000863_pilon:950279..956825- (Gracilaria gracilis GNS1m male) ATGACCATTCCACAGCAGTCCAAGACACACCTGATCCCCAACGTGCTACC GAACACCAACGCAGATCAAATGCAGGACGTACTGGTAGTGGGCGTAGCGA CAGGTAATGAAACGGCAGAAGTTGTTAGGAAGGAATCTACTCCGTTGAAC TCGTCTCAAGTGCAAGGACCAAGCTCCAGCAGCTATTCTCTTGGCATCAA CGGCTTGATGCGGGCCTATCAAGGACGTGACAAGTACAGTGGTCGCTGTG ACGAGGACATTTCGTCCGCGTTTCTACTGTACGAAACTTTGTCCCGTGTT TGCCATCTAAGCGAACAGGAAAAGGCTGAAGCACTCCCTGTCATGCTCAA GGAAGAGGCTCTGCCGTATTACACGCGTGTATATCGCCCCGATGATACCT TCGATGCTGTTCGTCAGAAATTATTCGACTTGTATACGAGTGAAGAGCAA CAAGCTCGCACGTTTACCGGGGACGAGGATACAACGCTAGTAGCAATTCT CGACGCTAATTGGTATGCCAGGCGTGTAAGTGGCATACTGTTCGAAATCG TTCTGGAGGTCCAAGCCTCAATGATCGATGAAGGAAATGATTCGTTTAAA ATTGCTTGCGTGCGTGTTGTGAAGAAGTTGAGCAGAGAGTTGCCACATGA CCAGGCAAGGTGGATGCGGATTCTGCTAGAACTGGAAGAGCTACCCGACT GGGACACATGCGGTCTGAGCATAGACAGCAATCGAGTAAGGCATGCAGAT GAACTGACAGACCGGGCGTCGAGGGGAACGAATTCTGCACGCCTAAAATT AGGAGATGGCATTCTTGTCGGAGAAGAGACATCTGTGAAGAGATTGTACT ACCGTGGTGGAGGCCTTGGGGTGGGTTCTACAAGCGCAGCTGTAAATAGT GCCTTGGAACCTGCCATGACGAACGAAGAAGAGCTATTGTCCGACTTGAT AGCCGGGCGATGTGACCGGAAGGGACAGACAGCTATAGCTTTTTGGGCGG TGGCGGCTATTTCGAAGGGTCAGATCAAAGTTTCGAGGAAGAGCCGCGCA TGGTGTCGTGCCTTTTCGGACAGCGGGCCAACGGCGGGGGGGCATGCTGC TCTAGAATTGAAGTACGATGCACGCGGGTTGGAATTCTGGGAGACCACTG GCAACGAGGTTTCGGACGTGACGGTTGCGGAGTCGAAAAAGGGGGTGATG AAGGTAGACGCAGTTATGAGATAA back to top
|