Ggra6390.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6390.t1
Unique NameGgra6390.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length757
Homology
BLAST of Ggra6390.t1 vs. uniprot
Match: A0A2V3ILV9 (ULP_PROTEASE domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILV9_9FLOR)

HSP 1 Score: 304 bits (778), Expect = 7.160e-86
Identity = 184/501 (36.73%), Postives = 278/501 (55.49%), Query Frame = 0
Query:    1 MDCDYKFTDSTGSEVDGKGRGRKKSGKK-------ATLTLLKGPPP-GWESYI-DWTQPGTAARVNELEGRVN---EEAEEEDGEDAEEIVLKKEKFEVMKIVRDRVKEVMKKGGPKKTFDLGEIVEIAIAQYKKNRAKEIAVKVKGGVSGNRFELFQEDHKRITTFNMASDSAVMFTIQYLSNWHTDCLPDVYLMDSLMLEGWFGTVLHEGKEPLETLKRRTKSVAGRTLLWHQRTWFSRITLLPMVGANHWTLAVVVNFPSVLQEMEQVRRTKAPPTEKKAAVFWIDSMEKGSPQEGMRDNIFHYLVAAYPGTRKLTVTQLKERVSFYPVKKDVQNGLECGFYVAYHVSIVSKNHRLFLEGDYAAVQLYMTAMYKSYTFKGYRKDVQTRLQSLKEMYERNGERYVESSPFYW---TGRDPKCVSIRKRPELVLNTASGPVAEQSKNFTEVPVPRKEATTTSKCEEGSRTRVGDTKESKEXXXXXXXXXXEDFMERPPKR 486
            + CD++F+D  GSE+DG  RGRK S KK       A     + P P GWES + DW  PGT   ++ LE  V+   ++A++    D +E++    K +V+K VR     ++     + TFDL ++V  A A   K  A  IA+ V GG++   F L++ D   I  ++MASD++V+F ++YLSNW T  +   YLMD L+L+ WF   + + KE   +L++ T++  GR  L+H RTW + +TL+P+VGANHW+L V+V+ P VL  +E   R      +  +A +W+DSM+  S   G  DN++ YL+A YPG + +++ QL+  +  + +  +VQ+  ECGFYV YH+S+VSK   LF +G   AVQ Y+  MY+SY+F  YRKDV  RL+ L   Y +N  RY ES P+ W   T      V +   P    N  +   A  S + TE+        T+ + E G+R R      ++E          +DFM++ PKR
Sbjct:  280 LPCDFRFSDKNGSEIDGWRRGRKSSAKKNVAQDSTAKPEAPRKPAPFGWESLLEDWNNPGTLEVLSRLEFEVSKAEQKAKKRIPTDIDELLDIAHKVDVLKQVRISTSAMLSNSNGQTTFDLVDVVRSATATCVKKSASHIAIMVNGGITDESFILYKPDFDPIRKWSMASDNSVLFVMRYLSNWSTHSIGTFYLMDPLLLKLWFQERIRDCKERFISLQKSTRTPQGRQYLFHYRTWHADMTLIPVVGANHWSLVVLVHLPRVLSALEAAERKV---NDVISASYWLDSMDDNSLHNGFDDNVYQYLLAIYPGKQNVSLAQLRAALPLHRLSCEVQSSNECGFYVTYHISLVSKKISLFKKGQPEAVQRYINDMYRSYSFGAYRKDVLERLEFLVSEYSKNPNRYTESPPYTWETLTLPTLSKVPVTVSPVATSNIKNETPASVSPSHTEIITA-----TSQENENGTRKRS-----ARERAGTHSENGYDDFMDKLPKR 767          
BLAST of Ggra6390.t1 vs. uniprot
Match: A0A2V3ILV4 (ULP_PROTEASE domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILV4_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 1.210e-39
Identity = 97/319 (30.41%), Postives = 167/319 (52.35%), Query Frame = 0
Query:   87 VMKIVRDRVKEVMKKGGPKKTFDLGEIVEIAIAQYKKNRAKEIAVKVKGGVSGNRFELFQEDHKRITTFNMASDSAVMFTIQYLSNWHTDCLPDVYLMDSLMLEGWFGTVLHEGKEPLETLKRRTKSVAGRTLLWHQRTWFSRITLLPMVGANHWTLAVVVNFPSVLQEMEQVRRTKAPPTE--KKAAVFWIDSMEKGSPQEGMRDNIFHYLVAAYPGTRKLTVTQLKERVSFYPVKKDVQNGLECGFYVAYHVSIVSKNHRLFLEGDYAAVQLYMTAMYKSYTFKGYRKDVQTRLQSLKEMYERNGERYVESSPFYWT 403
            VMK+ R  ++++ + GG     DL +++     + +    K+I + V GG    +  L +ED   I    +A+D++VMFT+ +L+ W + C+    L+DS+  +GW+   L   K  L  L +         +   +  W + +  +P+ G  HW+L V++N   + +E+E +   K    E  ++A V+++DS+   SP      N+++YL A+YPG RK +V  + E VS +  +  +Q   ECGFYVAYHVS++++     L    A VQ ++  ++ SY F  Y+ +VQ RL+ L E Y   G+   E  P  W+
Sbjct:  601 VMKVARRFLRKLNETGGYTNR-DLSQVMREVSIEIQAVDEKDIKLVVNGGALRRKMTLLEEDIDPIRKSRLATDTSVMFTLSFLTKWTSGCIERCTLVDSIRTQGWWEKDLSADKNSLLALTKVFARQGTSFITACEEVWKTELCFMPICGGGHWSLVVILNLKYLFEELECLPDRKGIRRESGRRARVYFVDSIGMSSPHAVTYVNLYYYLCASYPGLRKPSVEHIMENVSSHQCRFMLQESSECGFYVAYHVSVLNRALAELLFETPARVQDFIREVHSSYDFLQYKSEVQKRLEYLLEKYYAGGKHVFEMQPLLWS 918          
The following BLAST results are available for this feature:
BLAST of Ggra6390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILV97.160e-8636.73ULP_PROTEASE domain-containing protein n=1 Tax=Gra... [more]
A0A2V3ILV41.210e-3930.41ULP_PROTEASE domain-containing protein n=1 Tax=Gra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 116..367
e-value: 9.3E-11
score: 43.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..592
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 137..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000861_piloncontigtig00000861_pilon:38373..40643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6390.t1Ggra6390.t1Gracilaria gracilis GNS1m malemRNAtig00000861_pilon 38373..40643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6390.t1 ID=Ggra6390.t1|Name=Ggra6390.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=757bp
MDCDYKFTDSTGSEVDGKGRGRKKSGKKATLTLLKGPPPGWESYIDWTQP
GTAARVNELEGRVNEEAEEEDGEDAEEIVLKKEKFEVMKIVRDRVKEVMK
KGGPKKTFDLGEIVEIAIAQYKKNRAKEIAVKVKGGVSGNRFELFQEDHK
RITTFNMASDSAVMFTIQYLSNWHTDCLPDVYLMDSLMLEGWFGTVLHEG
KEPLETLKRRTKSVAGRTLLWHQRTWFSRITLLPMVGANHWTLAVVVNFP
SVLQEMEQVRRTKAPPTEKKAAVFWIDSMEKGSPQEGMRDNIFHYLVAAY
PGTRKLTVTQLKERVSFYPVKKDVQNGLECGFYVAYHVSIVSKNHRLFLE
GDYAAVQLYMTAMYKSYTFKGYRKDVQTRLQSLKEMYERNGERYVESSPF
YWTGRDPKCVSIRKRPELVLNTASGPVAEQSKNFTEVPVPRKEATTTSKC
EEGSRTRVGDTKESKEKEKKEGENEDEDFMERPPKRSKLNQSSELWMAGR
DAKAEWDGDQSRRAEGEPCPFPTEANQSVPDGREEPQVPGETGSVVPDER
TEPTLSADARTGKHPSDLKEHAVWSEEPEGSARSNPQGESYGPLPQALTG
VLHGLLAMDGNGSPETKKKVISKVMRDSKIVDKMQTLGQECSIDKGMGKM
TPVVISKYREVVGSTRAGIDGEDLCRTPETIGVQQGVRSPSSPGIEANDR
HLSSTECSKKGGYAAMMEEAQSLLEVVSDTAIKKEWKTCMAKVEELVRKM
KSPKSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf