Ggra8955.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8955.t1
Unique NameGgra8955.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length377
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:966645..967775 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8955Ggra8955Gracilaria gracilis GNS1m malegenetig00000860_pilon 966645..967775 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8955.t1.stop1Ggra8955.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 966645..966647 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8955.t1.CDS1Ggra8955.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 966645..967775 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8955.t1.exon1Ggra8955.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 966645..967775 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8955.t1.start1Ggra8955.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 967773..967775 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8955.t1Ggra8955.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 966645..967775 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8955.t1 ID=Ggra8955.t1|Name=Ggra8955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=377bp
MGFVRRAALALLVLWVLVATNPSASSTSSFAAFIRSITPSSTVPLRKCLD
GSFPLCIESRRAYPQLSVALEMWFAPHRLAPAMLRDLEFETIDYAIFTVA
RSKPFPTVDNPGFAFIGILTLWLPVPHPARFTGSVELPNLIRFLRSHVRR
LRRLRRVLFSYRRGPSFAPFRERSLPDRPWEWLIAFFSIVGVLWFMIPSR
AKNHFTLTWHNLREKGHWWCMIFFHLSHGGSLLRLFRTIVSLNYLAPLLV
SNRIVTLSGLYGIVLTSSATSTALAMLVLTRRSIFASQYIAPSTPLEING
GGACVYALLVAACLSPSCNEPLPGGARPFELLMLNVLFDSFFLAGKKRIA
DYIAHTGASLGAWLFCSINMSTTTET*
back to top

spliced messenger RNA

>Ggra8955.t1 ID=Ggra8955.t1|Name=Ggra8955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000860_pilon:966645..967775- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTTTCGTGCGTCGCGCCGCGCTGGCGCTTCTCGTGCTTTGGGTGTT
GGTGGCCACCAATCCGTCTGCGTCATCCACTTCGAGTTTCGCAGCTTTCA
TTCGTAGCATCACGCCGTCGTCCACTGTACCACTCCGAAAATGTCTGGAT
GGATCCTTTCCGCTCTGCATCGAGTCCAGACGCGCCTATCCACAGCTCTC
TGTGGCGCTGGAGATGTGGTTTGCGCCGCATCGCCTGGCGCCGGCTATGT
TACGCGATCTGGAGTTTGAGACTATTGATTATGCCATCTTCACCGTCGCT
CGATCCAAGCCGTTTCCTACCGTCGATAATCCTGGCTTCGCTTTCATTGG
CATACTCACCTTGTGGTTGCCGGTGCCGCATCCTGCGCGTTTCACCGGAT
CGGTTGAGCTGCCGAACCTCATCCGCTTCTTGCGATCTCATGTTCGTCGC
TTGCGTCGCTTGCGCCGCGTGCTGTTTTCGTATCGGCGTGGTCCTTCATT
TGCGCCATTTCGCGAACGATCTTTGCCGGATCGTCCGTGGGAATGGCTCA
TTGCCTTCTTCTCTATCGTCGGCGTGCTGTGGTTCATGATCCCGAGTCGT
GCCAAGAACCATTTCACTCTCACCTGGCACAATCTTCGAGAAAAGGGCCA
TTGGTGGTGCATGATCTTCTTCCATCTTTCTCATGGTGGATCTCTTCTTC
GACTCTTTAGAACTATCGTGTCGCTCAATTATCTCGCACCGCTTCTGGTT
TCGAATCGAATCGTCACGCTGTCGGGATTGTATGGCATTGTGCTAACCTC
CTCAGCTACCTCAACAGCGTTGGCCATGCTTGTTTTGACCCGTCGTTCCA
TTTTTGCCTCGCAGTACATTGCGCCCAGTACGCCACTGGAGATCAATGGA
GGTGGCGCCTGCGTATACGCTTTGTTGGTTGCTGCCTGTCTATCGCCTTC
TTGTAACGAGCCGTTACCTGGAGGTGCCCGACCTTTTGAGCTGCTCATGC
TTAACGTTTTGTTTGATTCCTTCTTCCTGGCGGGCAAGAAACGCATTGCC
GACTACATTGCACATACCGGCGCTTCATTGGGCGCGTGGCTGTTCTGCTC
CATTAACATGTCAACTACTACGGAAACGTAA
back to top

protein sequence of Ggra8955.t1

>Ggra8955.t1 ID=Ggra8955.t1|Name=Ggra8955.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=377bp
MGFVRRAALALLVLWVLVATNPSASSTSSFAAFIRSITPSSTVPLRKCLD
GSFPLCIESRRAYPQLSVALEMWFAPHRLAPAMLRDLEFETIDYAIFTVA
RSKPFPTVDNPGFAFIGILTLWLPVPHPARFTGSVELPNLIRFLRSHVRR
LRRLRRVLFSYRRGPSFAPFRERSLPDRPWEWLIAFFSIVGVLWFMIPSR
AKNHFTLTWHNLREKGHWWCMIFFHLSHGGSLLRLFRTIVSLNYLAPLLV
SNRIVTLSGLYGIVLTSSATSTALAMLVLTRRSIFASQYIAPSTPLEING
GGACVYALLVAACLSPSCNEPLPGGARPFELLMLNVLFDSFFLAGKKRIA
DYIAHTGASLGAWLFCSINMSTTTET*
back to top

mRNA from alignment at tig00000860_pilon:966645..967775-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8955.t1 ID=Ggra8955.t1|Name=Ggra8955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000860_pilon:966645..967775- (Gracilaria gracilis GNS1m male)
ATGGGTTTCGTGCGTCGCGCCGCGCTGGCGCTTCTCGTGCTTTGGGTGTT
GGTGGCCACCAATCCGTCTGCGTCATCCACTTCGAGTTTCGCAGCTTTCA
TTCGTAGCATCACGCCGTCGTCCACTGTACCACTCCGAAAATGTCTGGAT
GGATCCTTTCCGCTCTGCATCGAGTCCAGACGCGCCTATCCACAGCTCTC
TGTGGCGCTGGAGATGTGGTTTGCGCCGCATCGCCTGGCGCCGGCTATGT
TACGCGATCTGGAGTTTGAGACTATTGATTATGCCATCTTCACCGTCGCT
CGATCCAAGCCGTTTCCTACCGTCGATAATCCTGGCTTCGCTTTCATTGG
CATACTCACCTTGTGGTTGCCGGTGCCGCATCCTGCGCGTTTCACCGGAT
CGGTTGAGCTGCCGAACCTCATCCGCTTCTTGCGATCTCATGTTCGTCGC
TTGCGTCGCTTGCGCCGCGTGCTGTTTTCGTATCGGCGTGGTCCTTCATT
TGCGCCATTTCGCGAACGATCTTTGCCGGATCGTCCGTGGGAATGGCTCA
TTGCCTTCTTCTCTATCGTCGGCGTGCTGTGGTTCATGATCCCGAGTCGT
GCCAAGAACCATTTCACTCTCACCTGGCACAATCTTCGAGAAAAGGGCCA
TTGGTGGTGCATGATCTTCTTCCATCTTTCTCATGGTGGATCTCTTCTTC
GACTCTTTAGAACTATCGTGTCGCTCAATTATCTCGCACCGCTTCTGGTT
TCGAATCGAATCGTCACGCTGTCGGGATTGTATGGCATTGTGCTAACCTC
CTCAGCTACCTCAACAGCGTTGGCCATGCTTGTTTTGACCCGTCGTTCCA
TTTTTGCCTCGCAGTACATTGCGCCCAGTACGCCACTGGAGATCAATGGA
GGTGGCGCCTGCGTATACGCTTTGTTGGTTGCTGCCTGTCTATCGCCTTC
TTGTAACGAGCCGTTACCTGGAGGTGCCCGACCTTTTGAGCTGCTCATGC
TTAACGTTTTGTTTGATTCCTTCTTCCTGGCGGGCAAGAAACGCATTGCC
GACTACATTGCACATACCGGCGCTTCATTGGGCGCGTGGCTGTTCTGCTC
CATTAACATGTCAACTACTACGGAAACGTAA
back to top

Coding sequence (CDS) from alignment at tig00000860_pilon:966645..967775-

>Ggra8955.t1 ID=Ggra8955.t1|Name=Ggra8955.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1131bp|location=Sequence derived from alignment at tig00000860_pilon:966645..967775- (Gracilaria gracilis GNS1m male)
ATGGGTTTCGTGCGTCGCGCCGCGCTGGCGCTTCTCGTGCTTTGGGTGTT
GGTGGCCACCAATCCGTCTGCGTCATCCACTTCGAGTTTCGCAGCTTTCA
TTCGTAGCATCACGCCGTCGTCCACTGTACCACTCCGAAAATGTCTGGAT
GGATCCTTTCCGCTCTGCATCGAGTCCAGACGCGCCTATCCACAGCTCTC
TGTGGCGCTGGAGATGTGGTTTGCGCCGCATCGCCTGGCGCCGGCTATGT
TACGCGATCTGGAGTTTGAGACTATTGATTATGCCATCTTCACCGTCGCT
CGATCCAAGCCGTTTCCTACCGTCGATAATCCTGGCTTCGCTTTCATTGG
CATACTCACCTTGTGGTTGCCGGTGCCGCATCCTGCGCGTTTCACCGGAT
CGGTTGAGCTGCCGAACCTCATCCGCTTCTTGCGATCTCATGTTCGTCGC
TTGCGTCGCTTGCGCCGCGTGCTGTTTTCGTATCGGCGTGGTCCTTCATT
TGCGCCATTTCGCGAACGATCTTTGCCGGATCGTCCGTGGGAATGGCTCA
TTGCCTTCTTCTCTATCGTCGGCGTGCTGTGGTTCATGATCCCGAGTCGT
GCCAAGAACCATTTCACTCTCACCTGGCACAATCTTCGAGAAAAGGGCCA
TTGGTGGTGCATGATCTTCTTCCATCTTTCTCATGGTGGATCTCTTCTTC
GACTCTTTAGAACTATCGTGTCGCTCAATTATCTCGCACCGCTTCTGGTT
TCGAATCGAATCGTCACGCTGTCGGGATTGTATGGCATTGTGCTAACCTC
CTCAGCTACCTCAACAGCGTTGGCCATGCTTGTTTTGACCCGTCGTTCCA
TTTTTGCCTCGCAGTACATTGCGCCCAGTACGCCACTGGAGATCAATGGA
GGTGGCGCCTGCGTATACGCTTTGTTGGTTGCTGCCTGTCTATCGCCTTC
TTGTAACGAGCCGTTACCTGGAGGTGCCCGACCTTTTGAGCTGCTCATGC
TTAACGTTTTGTTTGATTCCTTCTTCCTGGCGGGCAAGAAACGCATTGCC
GACTACATTGCACATACCGGCGCTTCATTGGGCGCGTGGCTGTTCTGCTC
CATTAACATGTCAACTACTACGGAAACGTAA
back to top