Ggra8837.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8837.t1
Unique NameGgra8837.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length556
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:469764..471431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog157072.XP_008873380.1
Preferred nameG6PDH
PFAMsG6PD_C,G6PD_N
Max annot lvl2759|Eukaryota
KEGG rclassRC00001,RC00066
KEGG koko:K00036
KEGG ReactionR00835,R02736,R10907
KEGG Pathwayko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230
KEGG ModuleM00004,M00006,M00008
GOsGO:0003674,GO:0003824,GO:0004345,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009507,GO:0009536,GO:0009987,GO:0010035,GO:0010038,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0046686,GO:0050896,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
Evalue3.16e-195
EggNOG OGsCOG0364@1|root,KOG0563@2759|Eukaryota
EC1.1.1.363,1.1.1.49
Descriptionglucose-6-phosphate dehydrogenase activity
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8837Ggra8837Gracilaria gracilis GNS1m malegenetig00000860_pilon 469764..471431 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8837.t1.stop1Ggra8837.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 469764..469766 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8837.t1.CDS1Ggra8837.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 469764..471431 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8837.t1.exon1Ggra8837.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 469764..471431 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8837.t1.start1Ggra8837.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 471429..471431 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8837.t1Ggra8837.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 469764..471431 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8837.t1 ID=Ggra8837.t1|Name=Ggra8837.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=556bp
MLKDVVVVHSEAPPVKPQGEMEAPTLRQNGKRQTAKTQEIHDSKGDYYRC
EYRSDTLTVFVIGASGDLAKKKTYPSLFALYCFHYLPDDFTIVGYARSPK
SDEQFRSTIKSYLKGADDQLKDEFLSHCVYRNGSGYGDEEAIGKVSEEMR
GVEKKTGKTANRLFYFAIPPVAFVPAAAALKRKAGTHDGWSRFIVEKPFG
SDSKSFEKLNEDMSSVLEEKEMYRIDHYIGKEAVQNLLVMRFANTTFEPL
WNNKYIDSVIISFKEDFGTKGRGGYFDKNGMIRDVVQNHIMQIVTMFAME
PPVRPNGDYIRDEKVRVLQAIPAIKKEDCITGQYVADDEGREQSYTADEG
VPDDSKTETGAAMVMYINNSRWEGVPFILRAGKALNENKSEIRVQFKKSP
GSSLMFGDEGFGDGYGTKVEAVERNELVIRLKPDEAIYLKMNIKSPGLSG
DPVVSELDLTYKTRFPDQFSQLPDAYTRLILQVMRGDAATFVRHDELREA
WRIFTPLLHSIGNGEIEPIKYKAFSRGPKEWDELCANHGFMYGGAAYHWK
KREGK*
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spliced messenger RNA

>Ggra8837.t1 ID=Ggra8837.t1|Name=Ggra8837.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1668bp|location=Sequence derived from alignment at tig00000860_pilon:469764..471431- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTAAAGGACGTTGTAGTGGTTCACTCCGAAGCGCCTCCCGTCAAGCC
GCAGGGCGAAATGGAAGCACCTACGCTGCGACAGAACGGAAAGCGTCAGA
CCGCCAAAACGCAAGAGATCCATGACTCAAAGGGTGATTACTATCGATGT
GAATACCGTAGTGACACTCTCACTGTGTTTGTCATTGGTGCCTCTGGCGA
TTTGGCTAAGAAGAAGACCTACCCTTCCTTGTTTGCATTGTATTGCTTCC
ATTATTTGCCCGATGACTTCACGATTGTTGGTTATGCTCGTTCTCCCAAG
AGTGATGAGCAGTTTAGAAGTACCATTAAATCTTACTTGAAGGGGGCTGA
TGACCAGCTGAAGGACGAGTTTCTCAGTCATTGTGTTTATCGAAATGGAA
GTGGATACGGTGATGAGGAGGCTATCGGAAAGGTCTCTGAGGAGATGAGG
GGGGTGGAGAAGAAGACAGGAAAGACGGCCAACCGCCTATTCTATTTCGC
TATCCCGCCTGTGGCGTTTGTTCCTGCCGCAGCTGCGTTGAAGAGGAAAG
CAGGCACCCATGATGGATGGTCCCGCTTTATCGTTGAGAAGCCATTCGGA
TCCGATTCTAAATCTTTCGAAAAGTTGAACGAGGATATGTCGTCCGTGCT
TGAGGAGAAGGAGATGTATCGAATTGATCATTACATCGGAAAGGAAGCTG
TTCAGAATTTGTTGGTGATGCGATTTGCGAACACCACGTTTGAACCATTG
TGGAATAACAAGTACATTGATTCAGTGATCATCTCGTTTAAGGAAGACTT
TGGAACTAAAGGTCGGGGTGGATATTTCGATAAGAACGGAATGATTCGAG
ATGTGGTTCAGAATCATATCATGCAAATCGTAACCATGTTTGCCATGGAG
CCTCCTGTGAGACCGAATGGAGACTACATTCGTGATGAGAAAGTCAGAGT
TCTGCAGGCGATTCCTGCTATCAAGAAGGAGGATTGCATCACTGGACAGT
ATGTTGCGGATGATGAAGGACGTGAGCAGTCGTACACAGCTGATGAAGGT
GTGCCGGATGACTCCAAGACCGAGACTGGAGCGGCTATGGTGATGTACAT
TAACAATTCTAGATGGGAGGGGGTACCGTTTATTCTGCGCGCTGGAAAGG
CTCTGAATGAGAATAAGAGCGAGATTCGCGTGCAGTTTAAGAAGAGCCCT
GGAAGCAGCTTGATGTTTGGTGACGAAGGATTTGGAGACGGATACGGAAC
CAAAGTTGAAGCGGTTGAACGCAATGAGTTGGTGATTCGTCTTAAGCCTG
ACGAAGCTATTTACCTCAAGATGAACATCAAGTCTCCTGGTCTGAGCGGC
GACCCAGTGGTTTCGGAACTGGACCTGACATACAAAACAAGATTCCCGGA
CCAATTCTCACAGCTACCTGACGCATACACCAGGCTAATCTTGCAGGTGA
TGAGAGGCGACGCTGCTACTTTTGTGCGACATGACGAGCTCCGAGAGGCG
TGGAGAATCTTCACGCCGCTGCTACATTCGATCGGTAACGGGGAGATTGA
GCCTATCAAGTACAAGGCGTTCAGCAGAGGTCCCAAGGAATGGGATGAGC
TTTGTGCCAACCACGGCTTCATGTATGGAGGTGCGGCTTACCATTGGAAG
AAGAGGGAAGGCAAGTAG
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protein sequence of Ggra8837.t1

>Ggra8837.t1 ID=Ggra8837.t1|Name=Ggra8837.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=556bp
MLKDVVVVHSEAPPVKPQGEMEAPTLRQNGKRQTAKTQEIHDSKGDYYRC
EYRSDTLTVFVIGASGDLAKKKTYPSLFALYCFHYLPDDFTIVGYARSPK
SDEQFRSTIKSYLKGADDQLKDEFLSHCVYRNGSGYGDEEAIGKVSEEMR
GVEKKTGKTANRLFYFAIPPVAFVPAAAALKRKAGTHDGWSRFIVEKPFG
SDSKSFEKLNEDMSSVLEEKEMYRIDHYIGKEAVQNLLVMRFANTTFEPL
WNNKYIDSVIISFKEDFGTKGRGGYFDKNGMIRDVVQNHIMQIVTMFAME
PPVRPNGDYIRDEKVRVLQAIPAIKKEDCITGQYVADDEGREQSYTADEG
VPDDSKTETGAAMVMYINNSRWEGVPFILRAGKALNENKSEIRVQFKKSP
GSSLMFGDEGFGDGYGTKVEAVERNELVIRLKPDEAIYLKMNIKSPGLSG
DPVVSELDLTYKTRFPDQFSQLPDAYTRLILQVMRGDAATFVRHDELREA
WRIFTPLLHSIGNGEIEPIKYKAFSRGPKEWDELCANHGFMYGGAAYHWK
KREGK*
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mRNA from alignment at tig00000860_pilon:469764..471431-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8837.t1 ID=Ggra8837.t1|Name=Ggra8837.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1668bp|location=Sequence derived from alignment at tig00000860_pilon:469764..471431- (Gracilaria gracilis GNS1m male)
ATGCTAAAGGACGTTGTAGTGGTTCACTCCGAAGCGCCTCCCGTCAAGCC
GCAGGGCGAAATGGAAGCACCTACGCTGCGACAGAACGGAAAGCGTCAGA
CCGCCAAAACGCAAGAGATCCATGACTCAAAGGGTGATTACTATCGATGT
GAATACCGTAGTGACACTCTCACTGTGTTTGTCATTGGTGCCTCTGGCGA
TTTGGCTAAGAAGAAGACCTACCCTTCCTTGTTTGCATTGTATTGCTTCC
ATTATTTGCCCGATGACTTCACGATTGTTGGTTATGCTCGTTCTCCCAAG
AGTGATGAGCAGTTTAGAAGTACCATTAAATCTTACTTGAAGGGGGCTGA
TGACCAGCTGAAGGACGAGTTTCTCAGTCATTGTGTTTATCGAAATGGAA
GTGGATACGGTGATGAGGAGGCTATCGGAAAGGTCTCTGAGGAGATGAGG
GGGGTGGAGAAGAAGACAGGAAAGACGGCCAACCGCCTATTCTATTTCGC
TATCCCGCCTGTGGCGTTTGTTCCTGCCGCAGCTGCGTTGAAGAGGAAAG
CAGGCACCCATGATGGATGGTCCCGCTTTATCGTTGAGAAGCCATTCGGA
TCCGATTCTAAATCTTTCGAAAAGTTGAACGAGGATATGTCGTCCGTGCT
TGAGGAGAAGGAGATGTATCGAATTGATCATTACATCGGAAAGGAAGCTG
TTCAGAATTTGTTGGTGATGCGATTTGCGAACACCACGTTTGAACCATTG
TGGAATAACAAGTACATTGATTCAGTGATCATCTCGTTTAAGGAAGACTT
TGGAACTAAAGGTCGGGGTGGATATTTCGATAAGAACGGAATGATTCGAG
ATGTGGTTCAGAATCATATCATGCAAATCGTAACCATGTTTGCCATGGAG
CCTCCTGTGAGACCGAATGGAGACTACATTCGTGATGAGAAAGTCAGAGT
TCTGCAGGCGATTCCTGCTATCAAGAAGGAGGATTGCATCACTGGACAGT
ATGTTGCGGATGATGAAGGACGTGAGCAGTCGTACACAGCTGATGAAGGT
GTGCCGGATGACTCCAAGACCGAGACTGGAGCGGCTATGGTGATGTACAT
TAACAATTCTAGATGGGAGGGGGTACCGTTTATTCTGCGCGCTGGAAAGG
CTCTGAATGAGAATAAGAGCGAGATTCGCGTGCAGTTTAAGAAGAGCCCT
GGAAGCAGCTTGATGTTTGGTGACGAAGGATTTGGAGACGGATACGGAAC
CAAAGTTGAAGCGGTTGAACGCAATGAGTTGGTGATTCGTCTTAAGCCTG
ACGAAGCTATTTACCTCAAGATGAACATCAAGTCTCCTGGTCTGAGCGGC
GACCCAGTGGTTTCGGAACTGGACCTGACATACAAAACAAGATTCCCGGA
CCAATTCTCACAGCTACCTGACGCATACACCAGGCTAATCTTGCAGGTGA
TGAGAGGCGACGCTGCTACTTTTGTGCGACATGACGAGCTCCGAGAGGCG
TGGAGAATCTTCACGCCGCTGCTACATTCGATCGGTAACGGGGAGATTGA
GCCTATCAAGTACAAGGCGTTCAGCAGAGGTCCCAAGGAATGGGATGAGC
TTTGTGCCAACCACGGCTTCATGTATGGAGGTGCGGCTTACCATTGGAAG
AAGAGGGAAGGCAAGTAG
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Coding sequence (CDS) from alignment at tig00000860_pilon:469764..471431-

>Ggra8837.t1 ID=Ggra8837.t1|Name=Ggra8837.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1668bp|location=Sequence derived from alignment at tig00000860_pilon:469764..471431- (Gracilaria gracilis GNS1m male)
ATGCTAAAGGACGTTGTAGTGGTTCACTCCGAAGCGCCTCCCGTCAAGCC
GCAGGGCGAAATGGAAGCACCTACGCTGCGACAGAACGGAAAGCGTCAGA
CCGCCAAAACGCAAGAGATCCATGACTCAAAGGGTGATTACTATCGATGT
GAATACCGTAGTGACACTCTCACTGTGTTTGTCATTGGTGCCTCTGGCGA
TTTGGCTAAGAAGAAGACCTACCCTTCCTTGTTTGCATTGTATTGCTTCC
ATTATTTGCCCGATGACTTCACGATTGTTGGTTATGCTCGTTCTCCCAAG
AGTGATGAGCAGTTTAGAAGTACCATTAAATCTTACTTGAAGGGGGCTGA
TGACCAGCTGAAGGACGAGTTTCTCAGTCATTGTGTTTATCGAAATGGAA
GTGGATACGGTGATGAGGAGGCTATCGGAAAGGTCTCTGAGGAGATGAGG
GGGGTGGAGAAGAAGACAGGAAAGACGGCCAACCGCCTATTCTATTTCGC
TATCCCGCCTGTGGCGTTTGTTCCTGCCGCAGCTGCGTTGAAGAGGAAAG
CAGGCACCCATGATGGATGGTCCCGCTTTATCGTTGAGAAGCCATTCGGA
TCCGATTCTAAATCTTTCGAAAAGTTGAACGAGGATATGTCGTCCGTGCT
TGAGGAGAAGGAGATGTATCGAATTGATCATTACATCGGAAAGGAAGCTG
TTCAGAATTTGTTGGTGATGCGATTTGCGAACACCACGTTTGAACCATTG
TGGAATAACAAGTACATTGATTCAGTGATCATCTCGTTTAAGGAAGACTT
TGGAACTAAAGGTCGGGGTGGATATTTCGATAAGAACGGAATGATTCGAG
ATGTGGTTCAGAATCATATCATGCAAATCGTAACCATGTTTGCCATGGAG
CCTCCTGTGAGACCGAATGGAGACTACATTCGTGATGAGAAAGTCAGAGT
TCTGCAGGCGATTCCTGCTATCAAGAAGGAGGATTGCATCACTGGACAGT
ATGTTGCGGATGATGAAGGACGTGAGCAGTCGTACACAGCTGATGAAGGT
GTGCCGGATGACTCCAAGACCGAGACTGGAGCGGCTATGGTGATGTACAT
TAACAATTCTAGATGGGAGGGGGTACCGTTTATTCTGCGCGCTGGAAAGG
CTCTGAATGAGAATAAGAGCGAGATTCGCGTGCAGTTTAAGAAGAGCCCT
GGAAGCAGCTTGATGTTTGGTGACGAAGGATTTGGAGACGGATACGGAAC
CAAAGTTGAAGCGGTTGAACGCAATGAGTTGGTGATTCGTCTTAAGCCTG
ACGAAGCTATTTACCTCAAGATGAACATCAAGTCTCCTGGTCTGAGCGGC
GACCCAGTGGTTTCGGAACTGGACCTGACATACAAAACAAGATTCCCGGA
CCAATTCTCACAGCTACCTGACGCATACACCAGGCTAATCTTGCAGGTGA
TGAGAGGCGACGCTGCTACTTTTGTGCGACATGACGAGCTCCGAGAGGCG
TGGAGAATCTTCACGCCGCTGCTACATTCGATCGGTAACGGGGAGATTGA
GCCTATCAAGTACAAGGCGTTCAGCAGAGGTCCCAAGGAATGGGATGAGC
TTTGTGCCAACCACGGCTTCATGTATGGAGGTGCGGCTTACCATTGGAAG
AAGAGGGAAGGCAAGTAG
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