Ggra3019.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3019.t1
Unique NameGgra3019.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length119
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:875782..876138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3019Ggra3019Gracilaria gracilis GNS1m malegenetig00000858_pilon 875782..876138 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3019.t1.stop1Ggra3019.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000858_pilon 875782..875784 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3019.t1.CDS1Ggra3019.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000858_pilon 875782..876138 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3019.t1.exon1Ggra3019.t1.exon1Gracilaria gracilis GNS1m maleexontig00000858_pilon 875782..876138 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3019.t1.start1Ggra3019.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000858_pilon 876136..876138 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3019.t1Ggra3019.t1Gracilaria gracilis GNS1m malepolypeptidetig00000858_pilon 875782..876138 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3019.t1 ID=Ggra3019.t1|Name=Ggra3019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=119bp
MDRMRACGERGRQDERVIATVKQVWKNLREEEQQHTRVAPQRKQLRDAAD
GCPSAAWAAHSKPDSNLAWQMLSQLRLPSTATAARRDRNLSRVEAADVYM
QLRHVSSERGGSLSADTL*
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spliced messenger RNA

>Ggra3019.t1 ID=Ggra3019.t1|Name=Ggra3019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=357bp|location=Sequence derived from alignment at tig00000858_pilon:875782..876138- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGGATGCGGGCTTGTGGGGAAAGGGGACGACAGGACGAGCGAGT
GATAGCGACGGTGAAGCAGGTTTGGAAGAACTTGCGCGAAGAGGAGCAGC
AACACACGCGGGTGGCGCCTCAGCGGAAGCAGTTGCGTGACGCTGCTGAC
GGCTGCCCAAGCGCGGCATGGGCTGCACATTCCAAGCCAGATTCCAACCT
CGCTTGGCAGATGTTGTCACAGCTGCGTCTGCCGTCCACCGCGACGGCCG
CAAGGCGTGACCGCAACTTGTCACGCGTCGAGGCGGCTGACGTGTACATG
CAGCTACGCCACGTGTCCAGCGAACGCGGTGGCTCGTTGAGTGCAGATAC
CCTGTAG
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protein sequence of Ggra3019.t1

>Ggra3019.t1 ID=Ggra3019.t1|Name=Ggra3019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=119bp
MDRMRACGERGRQDERVIATVKQVWKNLREEEQQHTRVAPQRKQLRDAAD
GCPSAAWAAHSKPDSNLAWQMLSQLRLPSTATAARRDRNLSRVEAADVYM
QLRHVSSERGGSLSADTL*
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mRNA from alignment at tig00000858_pilon:875782..876138-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3019.t1 ID=Ggra3019.t1|Name=Ggra3019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=357bp|location=Sequence derived from alignment at tig00000858_pilon:875782..876138- (Gracilaria gracilis GNS1m male)
ATGGACAGGATGCGGGCTTGTGGGGAAAGGGGACGACAGGACGAGCGAGT
GATAGCGACGGTGAAGCAGGTTTGGAAGAACTTGCGCGAAGAGGAGCAGC
AACACACGCGGGTGGCGCCTCAGCGGAAGCAGTTGCGTGACGCTGCTGAC
GGCTGCCCAAGCGCGGCATGGGCTGCACATTCCAAGCCAGATTCCAACCT
CGCTTGGCAGATGTTGTCACAGCTGCGTCTGCCGTCCACCGCGACGGCCG
CAAGGCGTGACCGCAACTTGTCACGCGTCGAGGCGGCTGACGTGTACATG
CAGCTACGCCACGTGTCCAGCGAACGCGGTGGCTCGTTGAGTGCAGATAC
CCTGTAG
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Coding sequence (CDS) from alignment at tig00000858_pilon:875782..876138-

>Ggra3019.t1 ID=Ggra3019.t1|Name=Ggra3019.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=357bp|location=Sequence derived from alignment at tig00000858_pilon:875782..876138- (Gracilaria gracilis GNS1m male)
ATGGACAGGATGCGGGCTTGTGGGGAAAGGGGACGACAGGACGAGCGAGT
GATAGCGACGGTGAAGCAGGTTTGGAAGAACTTGCGCGAAGAGGAGCAGC
AACACACGCGGGTGGCGCCTCAGCGGAAGCAGTTGCGTGACGCTGCTGAC
GGCTGCCCAAGCGCGGCATGGGCTGCACATTCCAAGCCAGATTCCAACCT
CGCTTGGCAGATGTTGTCACAGCTGCGTCTGCCGTCCACCGCGACGGCCG
CAAGGCGTGACCGCAACTTGTCACGCGTCGAGGCGGCTGACGTGTACATG
CAGCTACGCCACGTGTCCAGCGAACGCGGTGGCTCGTTGAGTGCAGATAC
CCTGTAG
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