Ggra4905.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4905.t1
Unique NameGgra4905.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000856_piloncontigtig00000856_pilon:396965..397387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4905Ggra4905Gracilaria gracilis GNS1m malegenetig00000856_pilon 396965..397387 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4905.t1.start1Ggra4905.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000856_pilon 396965..396967 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4905.t1.CDS1Ggra4905.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000856_pilon 396965..397387 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4905.t1.exon1Ggra4905.t1.exon1Gracilaria gracilis GNS1m maleexontig00000856_pilon 396965..397387 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4905.t1.stop1Ggra4905.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000856_pilon 397385..397387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4905.t1Ggra4905.t1Gracilaria gracilis GNS1m malepolypeptidetig00000856_pilon 396965..397387 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4905.t1 ID=Ggra4905.t1|Name=Ggra4905.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=141bp
MKIILVLALCFSLSSATVIPNSRTGESDERASSTRLLENELSTTADAVHN
SPAHDEKLRNIADRGTVFPVYKKSDLAIALRSPLPIMELELHTDPPPTRP
PCFSCGLDASILLGDRPEFLDTGSNGVDVVSNTAAIGISG*
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spliced messenger RNA

>Ggra4905.t1 ID=Ggra4905.t1|Name=Ggra4905.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000856_pilon:396965..397387+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGATTATTCTCGTTCTTGCTCTATGCTTTTCACTTTCGTCCGCAAC
AGTCATTCCAAATTCGCGTACTGGAGAATCAGATGAGAGAGCCAGTAGCA
CGAGGCTCCTGGAAAATGAGCTTTCGACAACAGCAGATGCCGTCCACAAC
AGCCCCGCTCACGACGAAAAATTACGGAATATCGCAGATCGAGGTACCGT
CTTCCCGGTTTACAAGAAGTCTGACCTGGCCATAGCGTTGCGTTCCCCAC
TACCGATTATGGAGCTAGAGCTGCACACAGATCCTCCACCAACTCGTCCG
CCATGCTTTAGCTGCGGGTTAGATGCAAGTATTCTGCTCGGCGACCGTCC
GGAATTCCTAGATACCGGTTCAAATGGAGTGGATGTTGTCTCTAACACCG
CCGCAATCGGAATTTCCGGATGA
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protein sequence of Ggra4905.t1

>Ggra4905.t1 ID=Ggra4905.t1|Name=Ggra4905.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MKIILVLALCFSLSSATVIPNSRTGESDERASSTRLLENELSTTADAVHN
SPAHDEKLRNIADRGTVFPVYKKSDLAIALRSPLPIMELELHTDPPPTRP
PCFSCGLDASILLGDRPEFLDTGSNGVDVVSNTAAIGISG*
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mRNA from alignment at tig00000856_pilon:396965..397387+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4905.t1 ID=Ggra4905.t1|Name=Ggra4905.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000856_pilon:396965..397387+ (Gracilaria gracilis GNS1m male)
ATGAAGATTATTCTCGTTCTTGCTCTATGCTTTTCACTTTCGTCCGCAAC
AGTCATTCCAAATTCGCGTACTGGAGAATCAGATGAGAGAGCCAGTAGCA
CGAGGCTCCTGGAAAATGAGCTTTCGACAACAGCAGATGCCGTCCACAAC
AGCCCCGCTCACGACGAAAAATTACGGAATATCGCAGATCGAGGTACCGT
CTTCCCGGTTTACAAGAAGTCTGACCTGGCCATAGCGTTGCGTTCCCCAC
TACCGATTATGGAGCTAGAGCTGCACACAGATCCTCCACCAACTCGTCCG
CCATGCTTTAGCTGCGGGTTAGATGCAAGTATTCTGCTCGGCGACCGTCC
GGAATTCCTAGATACCGGTTCAAATGGAGTGGATGTTGTCTCTAACACCG
CCGCAATCGGAATTTCCGGATGA
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Coding sequence (CDS) from alignment at tig00000856_pilon:396965..397387+

>Ggra4905.t1 ID=Ggra4905.t1|Name=Ggra4905.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=423bp|location=Sequence derived from alignment at tig00000856_pilon:396965..397387+ (Gracilaria gracilis GNS1m male)
ATGAAGATTATTCTCGTTCTTGCTCTATGCTTTTCACTTTCGTCCGCAAC
AGTCATTCCAAATTCGCGTACTGGAGAATCAGATGAGAGAGCCAGTAGCA
CGAGGCTCCTGGAAAATGAGCTTTCGACAACAGCAGATGCCGTCCACAAC
AGCCCCGCTCACGACGAAAAATTACGGAATATCGCAGATCGAGGTACCGT
CTTCCCGGTTTACAAGAAGTCTGACCTGGCCATAGCGTTGCGTTCCCCAC
TACCGATTATGGAGCTAGAGCTGCACACAGATCCTCCACCAACTCGTCCG
CCATGCTTTAGCTGCGGGTTAGATGCAAGTATTCTGCTCGGCGACCGTCC
GGAATTCCTAGATACCGGTTCAAATGGAGTGGATGTTGTCTCTAACACCG
CCGCAATCGGAATTTCCGGATGA
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