Ggra4901.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4901.t1
Unique NameGgra4901.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A2V3IUQ3 (Chlorophyll(Ide) b reductase NOL, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ3_9FLOR)

HSP 1 Score: 95.9 bits (237), Expect = 2.270e-20
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0
Query:   24 NAVRNTVEWLQADHPGARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNATA 138
            +A+  TV  L+ + P ARVFG +A+VS  + V +L E A+  L SV +FI N GTVG  ++  +A      +VV  NLLGS++CA+EA R  E QQ+ +HV  + GSG +GNATA
Sbjct:   40 DALLETVAKLREERPSARVFGCVADVSKHEDVRRLCEFASVKLGSVDAFICNAGTVGGRSSVVNAPAALLESVVTTNLLGSVYCAKEAIRLGEQQQKPMHVFLVDGSGTMGNATA 154          
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A4D8XU46 (Chlorophyll(Ide) b reductase n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8XU46_SALSN)

HSP 1 Score: 62.0 bits (149), Expect = 8.500e-8
Identity = 55/194 (28.35%), Postives = 86/194 (44.33%), Query Frame = 0
Query:   40 ARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNAT-------ATLSTDMVLTEALLDEN-----------------------FDPSSRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTYTEFLTVPQVV 203
            A+V G   +VS+ + V KLA  A   L SV  +++N GT            E  + +V  NL+GS+ C REA R   +Q+   H+  M G+G+ G++T       +T      L  +LL E+                           ++++FN+  E P  VA  LV RMR V  + +   Y   LT P+++
Sbjct:  259 AKVVGIPCDVSNPEDVSKLANFAVNELGSVDIWVNNAGTNKGFRPLLQFSDEDIQQIVSTNLVGSILCTREALRIMGSQRNGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLLKESKKSKVGVHTASPGMVLTDLLLSGASVKNKQMFNIICELPETVARTLVPRMRVVKGNGKAINY---LTPPRIL 449          
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A7N2KZZ6 (Uncharacterized protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KZZ6_QUELO)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-7
Identity = 56/194 (28.87%), Postives = 85/194 (43.81%), Query Frame = 0
Query:   40 ARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNAT-------ATLSTDMVLTEALLDEN---------FDPS--------------SRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTYTEFLTVPQVV 203
            A+V G   +VS+   V KLA  A   L S+  +I+N GT            E  + +V  N++GSL C REA R  + Q +  H+  M G+G+ G++T       +T      L  +LL E+           P               ++++FN+  E P  VA  LV RMR V    +   Y   LT P+++
Sbjct:  246 AKVVGIACDVSEPDDVQKLANFAGNQLGSINIWINNAGTNKGFRPLLQFSDEDVKQIVSTNMVGSLLCTREAMRVMKNQAKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEHPETVARTLVPRMRVVKGSGKAINY---LTPPRIL 436          
BLAST of Ggra4901.t1 vs. uniprot
Match: probable chlorophyll(ide) b reductase NYC1, chloroplastic n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE17E0A (probable chlorophyll(ide) b reductase NYC1, chloroplastic n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE17E0A)

HSP 1 Score: 60.1 bits (144), Expect = 2.480e-7
Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   40 ARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNAT-------ATLSTDMVLTEALLDEN---------FDPS--------------SRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTY 193
            A+V G   +VS+   V KLA  A   L S+  +I+N GT            E  + +V  N++GSL C REA R  + Q +  H+  M G+G+ G++T       +T      L  +LL E+           P               ++++FN+  E P  VA  LV RMR V    +   Y
Sbjct:  106 AKVVGIACDVSEPDDVQKLANFAVNELGSINIWINNAGTNKGFRPLLQFSDEDVKQIVSTNMVGSLLCTREAMRVMKNQAKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEHPETVARTLVPRMRVVKGSGKAINY 289          
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A6I9U3M4 (probable chlorophyll(Ide) b reductase NYC1, chloroplastic n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U3M4_SESIN)

HSP 1 Score: 58.9 bits (141), Expect = 9.520e-7
Identity = 53/194 (27.32%), Postives = 83/194 (42.78%), Query Frame = 0
Query:   40 ARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNAT-------ATLSTDMVLTEALLDE-----------------------NFDPSSRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTYTEFLTVPQVV 203
            A+V G   +VS+  +V KLA  A   L S+  +++N GT            +  + +V  NL+GS+ C  +A R   +Q+   H+  M G+G+ G++T       AT      L  +LL E                            ++++FN+  E P  VA  LV RMR V    R   Y   LT P+++
Sbjct:  255 AKVVGIPCDVSNPDEVRKLANFAVNELGSIDIWVNNAGTNKGFRPLLQFNDDDIQQIVSTNLVGSILCTHQALRIMNSQRNGGHIFNMDGAGSGGSSTPLTAVYGATKCGLRQLQSSLLKECRKSKVGIHTASPGMVLTDLLLSGSSVKNKQMFNIICELPETVARTLVPRMRVVKGSGRAINY---LTPPRIL 445          
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A3D3D1S4 (Oxidoreductase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A3D3D1S4_9BURK)

HSP 1 Score: 56.2 bits (134), Expect = 4.250e-6
Identity = 37/115 (32.17%), Postives = 53/115 (46.09%), Query Frame = 0
Query:    5 STRRGRVFGASVGEAALDGNAVRNTVEWLQADHPGARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQ 119
            +  RG     +    A    AV   +E L     G R     A+V+DE+QV  L E     L  + + ++N G V + A   D   E  R +  +N+LGSL+CAREA R    Q+
Sbjct:   22 AAERGWAVAVNYARDAAAAQAVVQRIEAL-----GGRAIAVQADVADERQVLALFEAVDAQLGRLTALVNNAGVVDRPARLADMDGERLRRMFDINVLGSLYCAREAVRRMSTQR 131          
BLAST of Ggra4901.t1 vs. uniprot
Match: A0A218XY35 (probable chlorophyll(Ide) b reductase NYC1, chloroplastic n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XY35_PUNGR)

HSP 1 Score: 56.2 bits (134), Expect = 7.800e-6
Identity = 55/195 (28.21%), Postives = 83/195 (42.56%), Query Frame = 0
Query:   40 ARVFGSLANVSDEQQVPKLAEVATRNLPSVGSFISNDGTVGKG-AARGDAQPEYSRNVVGLNLLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNATATLST------------DMVLTEA------------------LLDENFDPSSRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTYTEFLTVPQVV 203
            A+V G   +VS+   V KLA  A R L S+  +I+N G + KG         E  + +V  NL+GS+ C REA      Q +  H+  M G+G+ G++T   +               +L E                   LL       ++++FN+  E P  VA  LV RMR V    +   Y   LT P+++
Sbjct:  242 AKVVGIPCDVSEPDDVRKLANFAVRELGSIDIWINNAG-INKGFRPLLQFTDEEIKQIVSTNLVGSVLCTREAMHVMRNQPQGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKECKKSKVGVHTASPGMVLTDLLLSGSTIKNKQMFNIICELPETVARSLVPRMRVVKGSGKAINY---LTPPRIL 432          
The following BLAST results are available for this feature:
BLAST of Ggra4901.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IUQ32.270e-2046.09Chlorophyll(Ide) b reductase NOL, chloroplastic n=... [more]
A0A4D8XU468.500e-828.35Chlorophyll(Ide) b reductase n=1 Tax=Salvia splend... [more]
A0A7N2KZZ61.100e-728.87Uncharacterized protein n=4 Tax=Fagaceae TaxID=350... [more]
probable chlorophyll(ide) b reductase NYC1, chloroplastic n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE17E0A2.480e-728.80probable chlorophyll(ide) b reductase NYC1, chloro... [more]
A0A6I9U3M49.520e-727.32probable chlorophyll(Ide) b reductase NYC1, chloro... [more]
A0A3D3D1S44.250e-632.17Oxidoreductase n=1 Tax=Comamonadaceae bacterium Ta... [more]
A0A218XY357.800e-628.21probable chlorophyll(Ide) b reductase NYC1, chloro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..154
e-value: 3.9E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR24314:SF22SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDRcoord: 139..202
NoneNo IPR availablePANTHERPTHR24314NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATEDcoord: 139..202
NoneNo IPR availablePANTHERPTHR24314:SF22SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDRcoord: 19..141
NoneNo IPR availablePANTHERPTHR24314NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATEDcoord: 19..141
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 13..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000856_piloncontigtig00000856_pilon:352115..353238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4901.t1Ggra4901.t1Gracilaria gracilis GNS1m malemRNAtig00000856_pilon 352115..353238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4901.t1 ID=Ggra4901.t1|Name=Ggra4901.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MVRASTRRGRVFGASVGEAALDGNAVRNTVEWLQADHPGARVFGSLANVS
DEQQVPKLAEVATRNLPSVGSFISNDGTVGKGAARGDAQPEYSRNVVGLN
LLGSLFCAREAARSAEAQQRRVHVLFMHGSGAIGNATATLSTDMVLTEAL
LDENFDPSSRRIFNLRAEEPHMVALYLVQRMRSVLTHDRQNTYTEFLTVP
QVVF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf