Ggra8661.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8661.t1
Unique NameGgra8661.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length774
Homology
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BLAST of Ggra8661.t1 vs. uniprot
Match: A0A2V3J660 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J660_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 1.350e-18
Identity = 59/178 (33.15%), Postives = 90/178 (50.56%), Query Frame = 0 
Query:  573 MRYDVEGARANLHPLKTWFWR----AYAVGAAIGSMLVAIFNAAGRENWYERLFDSLQTLTFLWVGLFGLLKLSSEDPNIIRHSFLGYRIIRDVNDLGSFINVD---IFKLALINGRQPMNWLSAEDLCFATPRCTGNVRIQGGLLASEAAKEGLLVSEKVA--IYVKQGKAFRVSEG 741
            ++Y  EGA  +       FW+     Y  G  + ++L A  N A R+N +ER  D    LT L V +FGLLKL SEDPN+IR++  G++++R   D+   +  D     ++ L  G   ++WL  E  C+A  + +G +R   G    E  + G   SE  A  I +K+   FR+S G
Sbjct:  270 IKYHTEGAMVSTGL----FWKISAWTYITGVILAALLTAALNIASRDNLFERFTDMAAVLTTLLVSVFGLLKLKSEDPNVIRNTLRGFKVLRHFEDVVREVKCDDEAYLRMVLSVGAADVDWLDREGSCYALTQRSGRIRDTVGAKLGELTRAGWFFSEHSAMNIVLKRVVHFRISSG 443
The following BLAST results are available for this feature:
BLAST of Ggra8661.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6601.350e-1833.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 621..639
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..589
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 610..620
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 640..773
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 590..609
NoneNo IPR availableTMHMMTMhelixcoord: 590..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:393525..395933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8661.t1Ggra8661.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 393525..395933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8661.t1 ID=Ggra8661.t1|Name=Ggra8661.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=774bp
MKSLGLSSRVTYSLYHHARPDIEYDHFSETSEEQQVHFRKPLRTNNTASD
NQSRSPSEHVTEWELHLYIDVEADLGEKVDLDGEALATVVHRWMFAHSVL
ASNSNSHQILRASEASRDAMRNMSVIVITSKDDSFAVESRTQLSGMERIV
EKKSLKAQQFLSVYIYHETSNVESTWVVDISLLCSIFFLRFGSRFDNPSP
MKNDYLRVLGVLEVESHSVPHRLLDYFPKPMPKNGYASFRVEGPSSTPVP
SEPSTGQSSAPSSALPTYRCFRNPDGFALGTNGLHVWDNDREGYCWRIHN
GFVATFCGRYRFSAWTTAVYAIALEREANAVQHSISNAPRSNSAPILDDR
KNREAEIEFGDMIREWYPILAYAARGLYRVGRFVVFVEHGKYGWLSDRVM
LRPSLLKRLRGAIRGAIDLVIPGILEYRQILSFGRFVDPRFRSMEPHPGN
ISIAGLCSSGWNKIVDLPQRLGRTVKHSATRCAARLNFSPWMNWHVIDIR
PPQRIQGFRNGQFEYSEASINPDRSVIRHDHVSSGDQELNVHVESLNELR
TRILGEFELTRTIGYAQFRMGQMRYDVEGARANLHPLKTWFWRAYAVGAA
IGSMLVAIFNAAGRENWYERLFDSLQTLTFLWVGLFGLLKLSSEDPNIIR
HSFLGYRIIRDVNDLGSFINVDIFKLALINGRQPMNWLSAEDLCFATPRC
TGNVRIQGGLLASEAAKEGLLVSEKVAIYVKQGKAFRVSEGHIDKSIELT
GEDLSTAMPLSMRIKEDFNVAGP*
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