Ggra8641.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8641.t1
Unique NameGgra8641.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
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BLAST of Ggra8641.t1 vs. uniprot
Match: A0A2V3IN74 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN74_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 9.540e-12
Identity = 69/250 (27.60%), Postives = 114/250 (45.60%), Query Frame = 0 
Query:   23 EQID-AAQTNAAHNDAEQSTRARHETAQPSPPPP-----------HSNA------DEQTKARIISAHKQVCMMLLASTPAQIPLLNLLDSGVVETYWACVEDLLLLVQNLPDFP-KHSSRQEQLRFVETHCSQICSRNGVHVDCQV--VVGSLVCVRETYPSYQVMLKMYHEDMEKQCAQLSQIKQEQETAATQNVSRLQMQQSRLQAEQMRRDAIMRSHEQRMTQIGQLMGSTPLYYQNGVAHYGGINF 251
            +Q+D AA TN     +  +    +    P+PPPP           H N       DE+ K  IIS  +Q+  M+      Q PL+ L DSG    YWA  ++L L V  + +      +   Q R      S    RN   V   V  +   L  +  ++ SY+ M+ + +   ++     ++++Q+Q  +            +R++ ++ R DAIM+  E+   +IGQ+ G+ P+YY NGV HYGG++F
Sbjct:   71 QQLDEAAATNQYPGPSPAAKTMTYPGQAPAPPPPTHEPTPASSAPHRNPASSTRDDEEKKKFIISTQRQLWSMVCEMLGTQPPLVKLSDSGSASFYWANEDELALSVYRVYNHVITGGTSPHQRRATVERLSTESWRNDARVSSSVRQLEAELAVLIVSFASYREMVDVMYRTSKR----AAEMQQKQTESXXXXXXXXXXATARIEQDRARIDAIMQQAERDRVKIGQITGAVPMYYTNGVPHYGGVHF 316
The following BLAST results are available for this feature:
BLAST of Ggra8641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IN749.540e-1227.60Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..192
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:59330..60085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1Ggra8641.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 59330..60085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MSHRGQLGSFLKDSLQKLQTVVEQIDAAQTNAAHNDAEQSTRARHETAQP
SPPPPHSNADEQTKARIISAHKQVCMMLLASTPAQIPLLNLLDSGVVETY
WACVEDLLLLVQNLPDFPKHSSRQEQLRFVETHCSQICSRNGVHVDCQVV
VGSLVCVRETYPSYQVMLKMYHEDMEKQCAQLSQIKQEQETAATQNVSRL
QMQQSRLQAEQMRRDAIMRSHEQRMTQIGQLMGSTPLYYQNGVAHYGGIN
F*
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