Ggra4063.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4063.t1
Unique NameGgra4063.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length360
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:16528..17607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4063Ggra4063Gracilaria gracilis GNS1m malegenetig00000853_pilon 16528..17607 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4063.t1.stop1Ggra4063.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000853_pilon 16528..16530 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4063.t1.CDS1Ggra4063.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000853_pilon 16528..17607 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4063.t1.exon1Ggra4063.t1.exon1Gracilaria gracilis GNS1m maleexontig00000853_pilon 16528..17607 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4063.t1.start1Ggra4063.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000853_pilon 17605..17607 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4063.t1Ggra4063.t1Gracilaria gracilis GNS1m malepolypeptidetig00000853_pilon 16528..17607 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4063.t1 ID=Ggra4063.t1|Name=Ggra4063.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=360bp
MGLAPDTDPDKDPVLQACLMTDQMYRDMLGVNKSNDGAMRTSKEIGQLQT
LCFEVGKAIATTFCAPVNTKLHRIMYHLTHHLYDFGCFRKGSTEQNETLH
KTTKHAYASTNRQMRTIAPQLLRARAQLATTNKYGADKTIEEQEVNQLLL
SRELHVAEENFSPPNKLTATETVNTKNNLTLFEDDEYQIINDEREEVSFD
SLVEDQMRCFLSGSKTIEENQNNIESLIDKSGSRIWLPLKRLSFKAKFEW
CLEEEVNTSVYSGAEVFGVKDRKDAVQYVQNGETRYGILHGIYRHKENHR
QRVVLLRCLERSPLDPRNIFVVEKYGHTRVQYITNSVDIRLQCAAVGWVT
RPAVIVPDP*
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spliced messenger RNA

>Ggra4063.t1 ID=Ggra4063.t1|Name=Ggra4063.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1080bp|location=Sequence derived from alignment at tig00000853_pilon:16528..17607- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCTCGCCCCTGACACAGACCCTGACAAGGATCCAGTGCTGCAAGC
CTGCTTAATGACGGATCAAATGTACAGAGATATGCTCGGAGTAAACAAGT
CAAATGACGGAGCAATGCGTACATCAAAAGAGATAGGACAGCTTCAGACT
CTCTGTTTCGAAGTGGGGAAAGCCATTGCAACAACATTTTGTGCACCCGT
GAACACAAAACTGCACAGAATCATGTATCATTTGACTCATCATTTGTACG
ACTTTGGATGTTTCCGAAAAGGATCCACAGAGCAAAATGAGACTTTGCAC
AAAACCACGAAGCACGCCTATGCATCAACCAATCGCCAGATGAGAACAAT
AGCTCCCCAGCTTCTCCGTGCTCGTGCTCAATTGGCTACTACCAACAAGT
ATGGCGCAGACAAAACAATTGAAGAGCAAGAAGTTAACCAGCTGTTACTT
TCGAGGGAACTGCACGTTGCCGAAGAGAATTTTTCACCTCCCAATAAACT
AACAGCAACCGAGACGGTTAACACGAAAAACAATTTAACCCTCTTCGAAG
ACGATGAATACCAAATAATCAATGATGAGAGAGAGGAAGTAAGTTTTGAC
TCTTTAGTAGAAGACCAAATGAGATGTTTCCTATCTGGATCGAAAACAAT
TGAAGAAAACCAGAATAATATTGAGAGTCTCATCGATAAGAGTGGTTCCA
GAATCTGGCTTCCACTAAAAAGATTATCATTCAAAGCGAAGTTCGAATGG
TGTCTCGAGGAAGAAGTGAACACCTCTGTATACAGTGGAGCAGAAGTATT
TGGAGTGAAAGACAGGAAAGACGCAGTGCAGTACGTACAAAACGGTGAGA
CCCGTTACGGGATATTGCACGGTATATATCGTCACAAAGAAAATCATAGG
CAAAGAGTGGTTTTGTTACGGTGCTTGGAAAGGTCTCCTTTAGATCCCAG
AAACATATTTGTGGTTGAAAAGTATGGACATACTAGAGTGCAATACATTA
CAAATTCTGTGGATATTAGGCTTCAGTGTGCAGCAGTGGGTTGGGTTACA
AGACCGGCAGTCATAGTTCCAGATCCTTAG
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protein sequence of Ggra4063.t1

>Ggra4063.t1 ID=Ggra4063.t1|Name=Ggra4063.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=360bp
MGLAPDTDPDKDPVLQACLMTDQMYRDMLGVNKSNDGAMRTSKEIGQLQT
LCFEVGKAIATTFCAPVNTKLHRIMYHLTHHLYDFGCFRKGSTEQNETLH
KTTKHAYASTNRQMRTIAPQLLRARAQLATTNKYGADKTIEEQEVNQLLL
SRELHVAEENFSPPNKLTATETVNTKNNLTLFEDDEYQIINDEREEVSFD
SLVEDQMRCFLSGSKTIEENQNNIESLIDKSGSRIWLPLKRLSFKAKFEW
CLEEEVNTSVYSGAEVFGVKDRKDAVQYVQNGETRYGILHGIYRHKENHR
QRVVLLRCLERSPLDPRNIFVVEKYGHTRVQYITNSVDIRLQCAAVGWVT
RPAVIVPDP*
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mRNA from alignment at tig00000853_pilon:16528..17607-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4063.t1 ID=Ggra4063.t1|Name=Ggra4063.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1080bp|location=Sequence derived from alignment at tig00000853_pilon:16528..17607- (Gracilaria gracilis GNS1m male)
ATGGGGCTCGCCCCTGACACAGACCCTGACAAGGATCCAGTGCTGCAAGC
CTGCTTAATGACGGATCAAATGTACAGAGATATGCTCGGAGTAAACAAGT
CAAATGACGGAGCAATGCGTACATCAAAAGAGATAGGACAGCTTCAGACT
CTCTGTTTCGAAGTGGGGAAAGCCATTGCAACAACATTTTGTGCACCCGT
GAACACAAAACTGCACAGAATCATGTATCATTTGACTCATCATTTGTACG
ACTTTGGATGTTTCCGAAAAGGATCCACAGAGCAAAATGAGACTTTGCAC
AAAACCACGAAGCACGCCTATGCATCAACCAATCGCCAGATGAGAACAAT
AGCTCCCCAGCTTCTCCGTGCTCGTGCTCAATTGGCTACTACCAACAAGT
ATGGCGCAGACAAAACAATTGAAGAGCAAGAAGTTAACCAGCTGTTACTT
TCGAGGGAACTGCACGTTGCCGAAGAGAATTTTTCACCTCCCAATAAACT
AACAGCAACCGAGACGGTTAACACGAAAAACAATTTAACCCTCTTCGAAG
ACGATGAATACCAAATAATCAATGATGAGAGAGAGGAAGTAAGTTTTGAC
TCTTTAGTAGAAGACCAAATGAGATGTTTCCTATCTGGATCGAAAACAAT
TGAAGAAAACCAGAATAATATTGAGAGTCTCATCGATAAGAGTGGTTCCA
GAATCTGGCTTCCACTAAAAAGATTATCATTCAAAGCGAAGTTCGAATGG
TGTCTCGAGGAAGAAGTGAACACCTCTGTATACAGTGGAGCAGAAGTATT
TGGAGTGAAAGACAGGAAAGACGCAGTGCAGTACGTACAAAACGGTGAGA
CCCGTTACGGGATATTGCACGGTATATATCGTCACAAAGAAAATCATAGG
CAAAGAGTGGTTTTGTTACGGTGCTTGGAAAGGTCTCCTTTAGATCCCAG
AAACATATTTGTGGTTGAAAAGTATGGACATACTAGAGTGCAATACATTA
CAAATTCTGTGGATATTAGGCTTCAGTGTGCAGCAGTGGGTTGGGTTACA
AGACCGGCAGTCATAGTTCCAGATCCTTAG
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Coding sequence (CDS) from alignment at tig00000853_pilon:16528..17607-

>Ggra4063.t1 ID=Ggra4063.t1|Name=Ggra4063.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1080bp|location=Sequence derived from alignment at tig00000853_pilon:16528..17607- (Gracilaria gracilis GNS1m male)
ATGGGGCTCGCCCCTGACACAGACCCTGACAAGGATCCAGTGCTGCAAGC
CTGCTTAATGACGGATCAAATGTACAGAGATATGCTCGGAGTAAACAAGT
CAAATGACGGAGCAATGCGTACATCAAAAGAGATAGGACAGCTTCAGACT
CTCTGTTTCGAAGTGGGGAAAGCCATTGCAACAACATTTTGTGCACCCGT
GAACACAAAACTGCACAGAATCATGTATCATTTGACTCATCATTTGTACG
ACTTTGGATGTTTCCGAAAAGGATCCACAGAGCAAAATGAGACTTTGCAC
AAAACCACGAAGCACGCCTATGCATCAACCAATCGCCAGATGAGAACAAT
AGCTCCCCAGCTTCTCCGTGCTCGTGCTCAATTGGCTACTACCAACAAGT
ATGGCGCAGACAAAACAATTGAAGAGCAAGAAGTTAACCAGCTGTTACTT
TCGAGGGAACTGCACGTTGCCGAAGAGAATTTTTCACCTCCCAATAAACT
AACAGCAACCGAGACGGTTAACACGAAAAACAATTTAACCCTCTTCGAAG
ACGATGAATACCAAATAATCAATGATGAGAGAGAGGAAGTAAGTTTTGAC
TCTTTAGTAGAAGACCAAATGAGATGTTTCCTATCTGGATCGAAAACAAT
TGAAGAAAACCAGAATAATATTGAGAGTCTCATCGATAAGAGTGGTTCCA
GAATCTGGCTTCCACTAAAAAGATTATCATTCAAAGCGAAGTTCGAATGG
TGTCTCGAGGAAGAAGTGAACACCTCTGTATACAGTGGAGCAGAAGTATT
TGGAGTGAAAGACAGGAAAGACGCAGTGCAGTACGTACAAAACGGTGAGA
CCCGTTACGGGATATTGCACGGTATATATCGTCACAAAGAAAATCATAGG
CAAAGAGTGGTTTTGTTACGGTGCTTGGAAAGGTCTCCTTTAGATCCCAG
AAACATATTTGTGGTTGAAAAGTATGGACATACTAGAGTGCAATACATTA
CAAATTCTGTGGATATTAGGCTTCAGTGTGCAGCAGTGGGTTGGGTTACA
AGACCGGCAGTCATAGTTCCAGATCCTTAG
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