Ggra10261.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10261.t1
Unique Name	Ggra10261.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	251

Homology

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BLAST of Ggra10261.t1 vs. uniprot
Match: A0A2V3IJ90 (Epsin-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ90_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 6.630e-77
Identity = 155/251 (61.75%), Postives = 189/251 (75.30%), Query Frame = 0

Query:    1 MLADDELLDSEREKSREIRAKIEAGGAGGSVSSDQYRFQNQMNTGNATVTSTGTATFKGYDDDGTYDDEPAGAFSKLRLEDKKQVDLLGDXXXXXXXXXXXXXXXXXXEFDPRGVGSQAKAEATQEDDLLALALSSPDVAPPPALPASNGGMKTSELIQQLASQRTSALVPVQTQASFESNSFSPPTQPYNAQSAQP-AAGSGFGTFDGFGAGVASPEAKPPAPAPIRLQRKEESDPFGDLLDTAKKSGVV 250
            ML DDELL++E+EKSREIRAKIE+ G GGS+SSDQYR+    +T    V+++ TATFKGYDDD  YD++PAGAFSKLR+E+KK+VDLLGD XXXXXXXXXXXXXXXXX FDPRG G+   ++  +EDDLLALALS P VA  P  P +NGG+KTSEL+QQLA+QR+ ALVP Q   +   ++      P+   S  P   G+ F  FDGFG G    + K PAP P++LQRKE++DPFGDLLDTAKKSGVV
Sbjct:  149 MLNDDELLEAEKEKSREIRAKIESSGGGGSISSDQYRYGGMGSTAGTNVSTSATATFKGYDDD-AYDEQPAGAFSKLRIEEKKEVDLLGDDXXXXXXXXXXXXXXXXXAFDPRGTGTSTASQLKEEDDLLALALSGPGVAALPGPPVTNGGLKTSELVQQLAAQRSLALVPAQHSTNNTEDA------PHAEDSHSPLTTGAPFQAFDGFGEGSTQSDVKRPAPVPVKLQRKEDADPFGDLLDTAKKSGVV 392

The following BLAST results are available for this feature:

BLAST of Ggra10261.t1 vs. uniprot

BLAST of Ggra10261.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJ90	6.630e-77	61.75	Epsin-3 n=1 Tax=Gracilariopsis chorda TaxID=448386...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..160

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000016_pilon	contig	tig00000016_pilon:243280..244032 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10261.t1	Ggra10261.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000016_pilon 243280..244032 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MLADDELLDSEREKSREIRAKIEAGGAGGSVSSDQYRFQNQMNTGNATVT
STGTATFKGYDDDGTYDDEPAGAFSKLRLEDKKQVDLLGDDDDTTATATN
GADDDDDDEFDPRGVGSQAKAEATQEDDLLALALSSPDVAPPPALPASNG
GMKTSELIQQLASQRTSALVPVQTQASFESNSFSPPTQPYNAQSAQPAAG
SGFGTFDGFGAGVASPEAKPPAPAPIRLQRKEESDPFGDLLDTAKKSGVV
*