Ggra10261.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10261.t1
Unique NameGgra10261.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:243280..244032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10261Ggra10261Gracilaria gracilis GNS1m malegenetig00000016_pilon 243280..244476 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10261.t1.stop1Ggra10261.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 243280..243282 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10261.t1.CDS1Ggra10261.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 243280..244032 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10261.t1.exon1Ggra10261.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 243280..244032 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10261.t1.start1Ggra10261.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 244030..244032 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10261.t1Ggra10261.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 243280..244032 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=251bp
MLADDELLDSEREKSREIRAKIEAGGAGGSVSSDQYRFQNQMNTGNATVT
STGTATFKGYDDDGTYDDEPAGAFSKLRLEDKKQVDLLGDDDDTTATATN
GADDDDDDEFDPRGVGSQAKAEATQEDDLLALALSSPDVAPPPALPASNG
GMKTSELIQQLASQRTSALVPVQTQASFESNSFSPPTQPYNAQSAQPAAG
SGFGTFDGFGAGVASPEAKPPAPAPIRLQRKEESDPFGDLLDTAKKSGVV
*
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spliced messenger RNA

>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=753bp|location=Sequence derived from alignment at tig00000016_pilon:243280..244032- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCAGACGATGAGCTTCTAGACTCGGAGCGCGAAAAGAGTCGTGA
GATTCGCGCCAAGATTGAAGCGGGCGGTGCCGGCGGTTCTGTCAGTAGCG
ATCAATACCGTTTCCAGAACCAGATGAATACTGGTAATGCTACCGTAACA
TCCACTGGTACAGCTACATTCAAGGGCTACGACGACGACGGTACATACGA
CGACGAGCCAGCAGGGGCGTTCAGCAAGTTGCGCCTCGAAGACAAGAAGC
AGGTTGACCTCCTGGGCGACGATGATGACACGACAGCTACTGCTACCAAT
GGCGCGGATGATGATGATGATGACGAATTCGATCCACGTGGCGTGGGAAG
CCAAGCAAAGGCAGAAGCTACGCAAGAAGATGATCTTCTCGCACTCGCTC
TTTCGTCACCCGATGTTGCGCCTCCACCGGCCTTGCCTGCATCTAATGGG
GGCATGAAGACCTCAGAACTTATACAACAGCTTGCATCTCAAAGAACAAG
TGCTTTGGTGCCTGTACAGACACAGGCGTCATTTGAGAGCAACTCCTTCA
GCCCTCCTACTCAACCTTACAACGCACAGAGTGCACAACCTGCAGCTGGC
TCTGGGTTTGGTACGTTCGACGGGTTTGGAGCTGGCGTGGCATCACCCGA
AGCAAAACCGCCAGCACCAGCACCAATAAGGCTACAAAGAAAAGAAGAAT
CAGACCCATTCGGAGATTTGTTGGATACTGCGAAAAAGAGCGGAGTCGTA
TGA
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protein sequence of Ggra10261.t1

>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MLADDELLDSEREKSREIRAKIEAGGAGGSVSSDQYRFQNQMNTGNATVT
STGTATFKGYDDDGTYDDEPAGAFSKLRLEDKKQVDLLGDDDDTTATATN
GADDDDDDEFDPRGVGSQAKAEATQEDDLLALALSSPDVAPPPALPASNG
GMKTSELIQQLASQRTSALVPVQTQASFESNSFSPPTQPYNAQSAQPAAG
SGFGTFDGFGAGVASPEAKPPAPAPIRLQRKEESDPFGDLLDTAKKSGVV
*
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mRNA from alignment at tig00000016_pilon:243280..244032-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=753bp|location=Sequence derived from alignment at tig00000016_pilon:243280..244032- (Gracilaria gracilis GNS1m male)
ATGCTTGCAGACGATGAGCTTCTAGACTCGGAGCGCGAAAAGAGTCGTGA
GATTCGCGCCAAGATTGAAGCGGGCGGTGCCGGCGGTTCTGTCAGTAGCG
ATCAATACCGTTTCCAGAACCAGATGAATACTGGTAATGCTACCGTAACA
TCCACTGGTACAGCTACATTCAAGGGCTACGACGACGACGGTACATACGA
CGACGAGCCAGCAGGGGCGTTCAGCAAGTTGCGCCTCGAAGACAAGAAGC
AGGTTGACCTCCTGGGCGACGATGATGACACGACAGCTACTGCTACCAAT
GGCGCGGATGATGATGATGATGACGAATTCGATCCACGTGGCGTGGGAAG
CCAAGCAAAGGCAGAAGCTACGCAAGAAGATGATCTTCTCGCACTCGCTC
TTTCGTCACCCGATGTTGCGCCTCCACCGGCCTTGCCTGCATCTAATGGG
GGCATGAAGACCTCAGAACTTATACAACAGCTTGCATCTCAAAGAACAAG
TGCTTTGGTGCCTGTACAGACACAGGCGTCATTTGAGAGCAACTCCTTCA
GCCCTCCTACTCAACCTTACAACGCACAGAGTGCACAACCTGCAGCTGGC
TCTGGGTTTGGTACGTTCGACGGGTTTGGAGCTGGCGTGGCATCACCCGA
AGCAAAACCGCCAGCACCAGCACCAATAAGGCTACAAAGAAAAGAAGAAT
CAGACCCATTCGGAGATTTGTTGGATACTGCGAAAAAGAGCGGAGTCGTA
TGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:243280..244032-

>Ggra10261.t1 ID=Ggra10261.t1|Name=Ggra10261.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=753bp|location=Sequence derived from alignment at tig00000016_pilon:243280..244032- (Gracilaria gracilis GNS1m male)
ATGCTTGCAGACGATGAGCTTCTAGACTCGGAGCGCGAAAAGAGTCGTGA
GATTCGCGCCAAGATTGAAGCGGGCGGTGCCGGCGGTTCTGTCAGTAGCG
ATCAATACCGTTTCCAGAACCAGATGAATACTGGTAATGCTACCGTAACA
TCCACTGGTACAGCTACATTCAAGGGCTACGACGACGACGGTACATACGA
CGACGAGCCAGCAGGGGCGTTCAGCAAGTTGCGCCTCGAAGACAAGAAGC
AGGTTGACCTCCTGGGCGACGATGATGACACGACAGCTACTGCTACCAAT
GGCGCGGATGATGATGATGATGACGAATTCGATCCACGTGGCGTGGGAAG
CCAAGCAAAGGCAGAAGCTACGCAAGAAGATGATCTTCTCGCACTCGCTC
TTTCGTCACCCGATGTTGCGCCTCCACCGGCCTTGCCTGCATCTAATGGG
GGCATGAAGACCTCAGAACTTATACAACAGCTTGCATCTCAAAGAACAAG
TGCTTTGGTGCCTGTACAGACACAGGCGTCATTTGAGAGCAACTCCTTCA
GCCCTCCTACTCAACCTTACAACGCACAGAGTGCACAACCTGCAGCTGGC
TCTGGGTTTGGTACGTTCGACGGGTTTGGAGCTGGCGTGGCATCACCCGA
AGCAAAACCGCCAGCACCAGCACCAATAAGGCTACAAAGAAAAGAAGAAT
CAGACCCATTCGGAGATTTGTTGGATACTGCGAAAAAGAGCGGAGTCGTA
TGA
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