Ggra3764.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3764.t1
Unique NameGgra3764.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1386454..1387035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3764Ggra3764Gracilaria gracilis GNS1m malegenetig00000850_pilon 1386454..1387035 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3764.t1.stop1Ggra3764.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1386454..1386456 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3764.t1.CDS1Ggra3764.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1386454..1387035 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3764.t1.exon1Ggra3764.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1386454..1387035 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3764.t1.start1Ggra3764.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1387033..1387035 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3764.t1Ggra3764.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1386454..1387035 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3764.t1 ID=Ggra3764.t1|Name=Ggra3764.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=194bp
MGDEKVSTNLTKHASQVIIVGSSGSLIVYIGSVLARTYVLNVAHCFAEEG
EIDIAASYVLEAEPSTKTKCFASLRNNVLMENVYVHRKYRADGSSANDVA
LVELRDKIDPTREDSEHVGHARSGGGIRHAQIAAKRAEALAARKRAVSAL
VRPRRAAGLFLAPTTSGRRIATRRLTFGSVEALLRVSATRADL*
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spliced messenger RNA

>Ggra3764.t1 ID=Ggra3764.t1|Name=Ggra3764.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:1386454..1387035- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGACGAGAAGGTCTCCACAAATCTGACGAAGCATGCGTCGCAGGT
GATCATCGTGGGCTCGTCTGGCTCGCTCATCGTGTATATAGGCAGTGTAC
TTGCACGCACGTACGTGCTCAACGTGGCACACTGCTTCGCCGAAGAGGGT
GAGATCGATATCGCCGCGTCGTACGTTCTGGAGGCCGAACCGTCTACAAA
GACCAAGTGCTTCGCCTCTCTACGCAACAATGTGTTAATGGAGAACGTGT
ACGTGCACCGGAAGTACCGCGCTGACGGCTCTTCGGCCAACGACGTGGCG
CTAGTGGAGCTACGCGACAAGATCGATCCCACCAGAGAAGACTCCGAGCA
CGTAGGGCACGCGCGTTCAGGCGGGGGGATACGGCACGCGCAGATCGCAG
CAAAGCGAGCCGAAGCGCTTGCGGCGCGCAAACGTGCTGTTTCAGCCCTG
GTTCGTCCGCGACGAGCAGCTGGGCTTTTTTTGGCGCCAACGACCTCAGG
AAGGAGAATTGCTACACGTCGTTTGACTTTCGGGAGCGTGGAGGCATTGT
TACGTGTTTCAGCGACTCGGGCGGACCTATAA
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protein sequence of Ggra3764.t1

>Ggra3764.t1 ID=Ggra3764.t1|Name=Ggra3764.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MGDEKVSTNLTKHASQVIIVGSSGSLIVYIGSVLARTYVLNVAHCFAEEG
EIDIAASYVLEAEPSTKTKCFASLRNNVLMENVYVHRKYRADGSSANDVA
LVELRDKIDPTREDSEHVGHARSGGGIRHAQIAAKRAEALAARKRAVSAL
VRPRRAAGLFLAPTTSGRRIATRRLTFGSVEALLRVSATRADL*
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mRNA from alignment at tig00000850_pilon:1386454..1387035-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3764.t1 ID=Ggra3764.t1|Name=Ggra3764.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:1386454..1387035- (Gracilaria gracilis GNS1m male)
ATGGGTGACGAGAAGGTCTCCACAAATCTGACGAAGCATGCGTCGCAGGT
GATCATCGTGGGCTCGTCTGGCTCGCTCATCGTGTATATAGGCAGTGTAC
TTGCACGCACGTACGTGCTCAACGTGGCACACTGCTTCGCCGAAGAGGGT
GAGATCGATATCGCCGCGTCGTACGTTCTGGAGGCCGAACCGTCTACAAA
GACCAAGTGCTTCGCCTCTCTACGCAACAATGTGTTAATGGAGAACGTGT
ACGTGCACCGGAAGTACCGCGCTGACGGCTCTTCGGCCAACGACGTGGCG
CTAGTGGAGCTACGCGACAAGATCGATCCCACCAGAGAAGACTCCGAGCA
CGTAGGGCACGCGCGTTCAGGCGGGGGGATACGGCACGCGCAGATCGCAG
CAAAGCGAGCCGAAGCGCTTGCGGCGCGCAAACGTGCTGTTTCAGCCCTG
GTTCGTCCGCGACGAGCAGCTGGGCTTTTTTTGGCGCCAACGACCTCAGG
AAGGAGAATTGCTACACGTCGTTTGACTTTCGGGAGCGTGGAGGCATTGT
TACGTGTTTCAGCGACTCGGGCGGACCTATAA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1386454..1387035-

>Ggra3764.t1 ID=Ggra3764.t1|Name=Ggra3764.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:1386454..1387035- (Gracilaria gracilis GNS1m male)
ATGGGTGACGAGAAGGTCTCCACAAATCTGACGAAGCATGCGTCGCAGGT
GATCATCGTGGGCTCGTCTGGCTCGCTCATCGTGTATATAGGCAGTGTAC
TTGCACGCACGTACGTGCTCAACGTGGCACACTGCTTCGCCGAAGAGGGT
GAGATCGATATCGCCGCGTCGTACGTTCTGGAGGCCGAACCGTCTACAAA
GACCAAGTGCTTCGCCTCTCTACGCAACAATGTGTTAATGGAGAACGTGT
ACGTGCACCGGAAGTACCGCGCTGACGGCTCTTCGGCCAACGACGTGGCG
CTAGTGGAGCTACGCGACAAGATCGATCCCACCAGAGAAGACTCCGAGCA
CGTAGGGCACGCGCGTTCAGGCGGGGGGATACGGCACGCGCAGATCGCAG
CAAAGCGAGCCGAAGCGCTTGCGGCGCGCAAACGTGCTGTTTCAGCCCTG
GTTCGTCCGCGACGAGCAGCTGGGCTTTTTTTGGCGCCAACGACCTCAGG
AAGGAGAATTGCTACACGTCGTTTGACTTTCGGGAGCGTGGAGGCATTGT
TACGTGTTTCAGCGACTCGGGCGGACCTATAA
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