Ggra3686.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra3686.t1
Unique Name	Ggra3686.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	302

Homology

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BLAST of Ggra3686.t1 vs. uniprot
Match: A0A2V3ITI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI7_9FLOR)

HSP 1 Score: 243 bits (620), Expect = 9.910e-76
Identity = 160/323 (49.54%), Postives = 206/323 (63.78%), Query Frame = 0

Query:    1 MESNHPLLHSTLPD--APAAHPAESANFPFHNSQNIGQIWTELASITVSAFTPQLISRLRTFISQNPCFELDNHLQMLGAIVVRHVTLCLSDPDRPCNSLPR--KHSQPSLSRPQVRAKRRSYRDLAYHAVRINRIVPQSEPLQVEPTSSSCSSSTSN-MPRRLSIQKASSLLDVAKKRPSTTIRSCQTPNAAKENDKIVLNQPANPSSA-------PPFNY---------SRSVALREESLNSRSQNRTQAFPRANATTFIESASMRQVNSPTSRHKVVAQPQNLSEYANRFRNDSRTT-APISRLVQQRKRRAEKNRHNLK 301
            M++NH  + +  P   +  A  +  +N+P  +  NIGQIWTELA+ITV AFTPQLI+RLR FIS+ PCF+LD HLQMLG IVVRH+ L L++PD+ C + P   + S+ S+SR   R KRRSYRD+AYHAVRINRIVP S PL+   +SSS ++  +N +PRRLSIQKA SL  + ++   +       P            QPA   SA       PP            +RSVALREE+  +R+QNR   FPRA+ TT IE  S     + ++R +VVAQPQNLSEYA+R RNDS +  APISRLVQ RK+RAE+ R N+K
Sbjct:    1 MDANHVSMDAPNPPNFSATAQQSHPSNYPCQHP-NIGQIWTELATITVQAFTPQLITRLRAFISKTPCFDLDTHLQMLGPIVVRHIALTLAEPDQ-CLNPPSTARSSRSSISRSNSRTKRRSYRDIAYHAVRINRIVPHSIPLESHRSSSSAAAPVTNSLPRRLSIQKAPSLSTIQRRASKSAPDKENQPTVTTARTAHAAAQPAXXXSAHATARNEPPEGACKPKALDLCNRSVALREETCWTRTQNRAHHFPRADVTTRIEPVS----TAKSARPRVVAQPQNLSEYASRLRNDSHSAVAPISRLVQMRKQRAERKRQNVK 317

The following BLAST results are available for this feature:

BLAST of Ggra3686.t1 vs. uniprot

BLAST of Ggra3686.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ITI7	9.910e-76	49.54	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 283..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..160

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000850_pilon	contig	tig00000850_pilon:1082829..1083734 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra3686.t1	Ggra3686.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000850_pilon 1082829..1083734 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra3686.t1 ID=Ggra3686.t1|Name=Ggra3686.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=302bp
MESNHPLLHSTLPDAPAAHPAESANFPFHNSQNIGQIWTELASITVSAFT
PQLISRLRTFISQNPCFELDNHLQMLGAIVVRHVTLCLSDPDRPCNSLPR
KHSQPSLSRPQVRAKRRSYRDLAYHAVRINRIVPQSEPLQVEPTSSSCSS
STSNMPRRLSIQKASSLLDVAKKRPSTTIRSCQTPNAAKENDKIVLNQPA
NPSSAPPFNYSRSVALREESLNSRSQNRTQAFPRANATTFIESASMRQVN
SPTSRHKVVAQPQNLSEYANRFRNDSRTTAPISRLVQQRKRRAEKNRHNL
K*