Ggra3631.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3631.t1
Unique NameGgra3631.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:350618..351361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3631Ggra3631Gracilaria gracilis GNS1m malegenetig00000850_pilon 350618..351361 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3631.t1.start1Ggra3631.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 350618..350620 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3631.t1.CDS1Ggra3631.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 350618..351361 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3631.t1.exon1Ggra3631.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 350618..351361 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3631.t1.stop1Ggra3631.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 351359..351361 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3631.t1Ggra3631.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 350618..351361 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3631.t1 ID=Ggra3631.t1|Name=Ggra3631.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=248bp
MFKMAVSWLSFPACFKDTMPPVDAGISVVDGKNIEPEASKTWNWIRGWFS
VRKAPTLDSEEAPLLKPRFPDVRRQGRSTPYPVRPKKYHTRVSPVQGHNE
AARRGGAHNLPVPYEPYQEWCGSSIEECNSICAYGCQYGDDCEWSGRPLA
PAQIWKNECCNSEDGDSFATALDHVAAEKAVGTHTQLGAINSNSSGIWIS
SVTAGEQTAGKDPTKGYEVQPLAFTAFKRKVKAFCAKVGRGRKQQMT*
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spliced messenger RNA

>Ggra3631.t1 ID=Ggra3631.t1|Name=Ggra3631.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=744bp|location=Sequence derived from alignment at tig00000850_pilon:350618..351361+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCAAGATGGCTGTATCTTGGCTTTCCTTCCCCGCATGCTTCAAGGA
TACTATGCCACCTGTTGATGCCGGCATATCTGTTGTCGATGGGAAGAACA
TTGAACCTGAGGCGTCCAAGACTTGGAATTGGATCAGGGGTTGGTTTTCA
GTTCGAAAAGCTCCAACCTTGGACAGCGAGGAAGCTCCTCTTCTCAAGCC
AAGGTTTCCGGATGTCCGGCGCCAAGGCCGATCCACCCCCTATCCCGTGA
GACCCAAAAAGTATCACACCCGGGTCTCTCCGGTACAAGGTCACAACGAA
GCAGCCAGACGAGGAGGAGCTCACAACCTCCCGGTACCATACGAGCCATA
TCAAGAATGGTGTGGCTCTTCTATCGAGGAATGCAATAGCATCTGTGCCT
ATGGATGTCAATACGGGGACGATTGCGAGTGGAGTGGAAGGCCCCTGGCG
CCGGCCCAAATATGGAAGAATGAATGCTGTAATTCAGAAGACGGCGATTC
ATTTGCAACGGCGTTGGACCACGTTGCGGCGGAGAAAGCGGTTGGAACAC
ACACCCAACTCGGAGCTATCAACTCTAACAGTTCAGGGATCTGGATCTCG
TCTGTAACTGCAGGTGAACAGACCGCAGGAAAGGATCCGACGAAAGGATA
TGAGGTGCAGCCACTTGCATTCACAGCGTTCAAAAGGAAAGTGAAGGCAT
TCTGTGCCAAGGTTGGAAGAGGAAGAAAGCAGCAGATGACCTAG
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protein sequence of Ggra3631.t1

>Ggra3631.t1 ID=Ggra3631.t1|Name=Ggra3631.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MFKMAVSWLSFPACFKDTMPPVDAGISVVDGKNIEPEASKTWNWIRGWFS
VRKAPTLDSEEAPLLKPRFPDVRRQGRSTPYPVRPKKYHTRVSPVQGHNE
AARRGGAHNLPVPYEPYQEWCGSSIEECNSICAYGCQYGDDCEWSGRPLA
PAQIWKNECCNSEDGDSFATALDHVAAEKAVGTHTQLGAINSNSSGIWIS
SVTAGEQTAGKDPTKGYEVQPLAFTAFKRKVKAFCAKVGRGRKQQMT*
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mRNA from alignment at tig00000850_pilon:350618..351361+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3631.t1 ID=Ggra3631.t1|Name=Ggra3631.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=744bp|location=Sequence derived from alignment at tig00000850_pilon:350618..351361+ (Gracilaria gracilis GNS1m male)
ATGTTCAAGATGGCTGTATCTTGGCTTTCCTTCCCCGCATGCTTCAAGGA
TACTATGCCACCTGTTGATGCCGGCATATCTGTTGTCGATGGGAAGAACA
TTGAACCTGAGGCGTCCAAGACTTGGAATTGGATCAGGGGTTGGTTTTCA
GTTCGAAAAGCTCCAACCTTGGACAGCGAGGAAGCTCCTCTTCTCAAGCC
AAGGTTTCCGGATGTCCGGCGCCAAGGCCGATCCACCCCCTATCCCGTGA
GACCCAAAAAGTATCACACCCGGGTCTCTCCGGTACAAGGTCACAACGAA
GCAGCCAGACGAGGAGGAGCTCACAACCTCCCGGTACCATACGAGCCATA
TCAAGAATGGTGTGGCTCTTCTATCGAGGAATGCAATAGCATCTGTGCCT
ATGGATGTCAATACGGGGACGATTGCGAGTGGAGTGGAAGGCCCCTGGCG
CCGGCCCAAATATGGAAGAATGAATGCTGTAATTCAGAAGACGGCGATTC
ATTTGCAACGGCGTTGGACCACGTTGCGGCGGAGAAAGCGGTTGGAACAC
ACACCCAACTCGGAGCTATCAACTCTAACAGTTCAGGGATCTGGATCTCG
TCTGTAACTGCAGGTGAACAGACCGCAGGAAAGGATCCGACGAAAGGATA
TGAGGTGCAGCCACTTGCATTCACAGCGTTCAAAAGGAAAGTGAAGGCAT
TCTGTGCCAAGGTTGGAAGAGGAAGAAAGCAGCAGATGACCTAG
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Coding sequence (CDS) from alignment at tig00000850_pilon:350618..351361+

>Ggra3631.t1 ID=Ggra3631.t1|Name=Ggra3631.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=744bp|location=Sequence derived from alignment at tig00000850_pilon:350618..351361+ (Gracilaria gracilis GNS1m male)
ATGTTCAAGATGGCTGTATCTTGGCTTTCCTTCCCCGCATGCTTCAAGGA
TACTATGCCACCTGTTGATGCCGGCATATCTGTTGTCGATGGGAAGAACA
TTGAACCTGAGGCGTCCAAGACTTGGAATTGGATCAGGGGTTGGTTTTCA
GTTCGAAAAGCTCCAACCTTGGACAGCGAGGAAGCTCCTCTTCTCAAGCC
AAGGTTTCCGGATGTCCGGCGCCAAGGCCGATCCACCCCCTATCCCGTGA
GACCCAAAAAGTATCACACCCGGGTCTCTCCGGTACAAGGTCACAACGAA
GCAGCCAGACGAGGAGGAGCTCACAACCTCCCGGTACCATACGAGCCATA
TCAAGAATGGTGTGGCTCTTCTATCGAGGAATGCAATAGCATCTGTGCCT
ATGGATGTCAATACGGGGACGATTGCGAGTGGAGTGGAAGGCCCCTGGCG
CCGGCCCAAATATGGAAGAATGAATGCTGTAATTCAGAAGACGGCGATTC
ATTTGCAACGGCGTTGGACCACGTTGCGGCGGAGAAAGCGGTTGGAACAC
ACACCCAACTCGGAGCTATCAACTCTAACAGTTCAGGGATCTGGATCTCG
TCTGTAACTGCAGGTGAACAGACCGCAGGAAAGGATCCGACGAAAGGATA
TGAGGTGCAGCCACTTGCATTCACAGCGTTCAAAAGGAAAGTGAAGGCAT
TCTGTGCCAAGGTTGGAAGAGGAAGAAAGCAGCAGATGACCTAG
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