Ggra3781.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3781.t1
Unique NameGgra3781.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length483
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1656818..1658266 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3781Ggra3781Gracilaria gracilis GNS1m malegenetig00000850_pilon 1656818..1658266 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3781.t1.stop1Ggra3781.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1656818..1656820 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3781.t1.CDS1Ggra3781.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1656818..1658266 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3781.t1.exon1Ggra3781.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1656818..1658266 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3781.t1.start1Ggra3781.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1658264..1658266 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3781.t1Ggra3781.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1656818..1658266 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3781.t1 ID=Ggra3781.t1|Name=Ggra3781.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=483bp
MDEPKKIRKYIKHVVNVARVLTRGISKENEYRQFIKRNIEREWNNFRKGD
KTAEQIQRNVVDIFYTVFPQHRMKNFIPSFKEFLCEEGGNDNPKQYNIER
RVEQDEGDIQVVPPNKRARNQPAECKKKRASECPTAHPDAKRIKETNSKS
SVSFEDNNEGVEGLERIELNEKENRLEKDENDEELDKSEDQQHWLAMKTS
ESNSTVKRSLLNQVIKRAIKNHRLGNFEEGTLDIIDLAVRIRLKHILKDL
KKYSSIRRRNQKLNLLKPEGNRVNVLLRIDREVEEVRLLRMRDERLAMRQ
SIGNDTDSVESQCIQKNVKTTRTLGLTEYQEFLAGKQKLRKNERQKLEAL
KLENQGRQRYLERYIDKKIRRRRRERYRAEFSQLSDINTLKKDAKKATAG
CEKGSITRNMDMKAKLLQLPGLVTPAHLWQIGHLGSDIAPEKASFYSTKP
ITLFDCDLLMEFDPQLRKSNLRLKWISRHFVA*
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spliced messenger RNA

>Ggra3781.t1 ID=Ggra3781.t1|Name=Ggra3781.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1449bp|location=Sequence derived from alignment at tig00000850_pilon:1656818..1658266- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGAGCCGAAGAAAATTAGAAAGTACATTAAACACGTTGTGAATGT
TGCAAGAGTTCTTACGCGAGGTATTTCAAAGGAGAACGAATATCGGCAGT
TCATTAAACGGAATATTGAGCGAGAATGGAACAATTTTCGAAAAGGGGAC
AAAACGGCAGAACAGATTCAGAGAAATGTCGTGGACATATTCTACACAGT
GTTTCCGCAACATCGGATGAAAAACTTTATCCCATCTTTCAAGGAATTCC
TCTGTGAAGAAGGGGGAAATGATAATCCAAAGCAATACAACATTGAACGA
AGGGTGGAGCAGGACGAAGGAGATATACAGGTTGTGCCTCCTAATAAAAG
GGCTCGAAATCAGCCTGCAGAGTGCAAAAAGAAAAGGGCAAGTGAATGCC
CTACAGCCCACCCAGACGCCAAAAGAATCAAAGAGACAAACTCCAAAAGC
AGCGTATCCTTTGAGGACAACAATGAGGGAGTGGAAGGGCTCGAAAGGAT
AGAACTCAATGAGAAAGAGAATAGGCTGGAAAAAGATGAAAACGACGAGG
AGTTAGATAAATCTGAAGATCAGCAACACTGGTTGGCAATGAAAACTTCA
GAGAGTAATAGCACAGTGAAAAGGAGTCTCCTGAACCAAGTTATTAAACG
AGCTATCAAGAATCATAGATTGGGTAATTTCGAGGAGGGTACTCTCGACA
TCATTGACTTGGCTGTTCGAATTCGTCTGAAGCACATATTGAAGGATTTG
AAGAAGTATTCGAGTATTCGGCGACGGAATCAGAAGCTCAACCTCTTGAA
ACCCGAGGGAAATCGCGTCAACGTTCTACTAAGAATAGACCGTGAAGTAG
AAGAAGTTCGTCTTCTTCGTATGCGGGACGAAAGATTAGCCATGAGGCAG
TCAATTGGGAATGATACGGACAGCGTTGAATCTCAATGTATACAGAAGAA
TGTGAAGACGACTCGGACTTTGGGATTAACCGAGTACCAGGAGTTTCTGG
CTGGCAAGCAAAAGCTGAGAAAAAATGAAAGACAGAAATTGGAAGCACTT
AAGCTTGAAAATCAAGGTAGGCAAAGGTACTTGGAAAGGTATATCGACAA
AAAGATAAGAAGGCGAAGAAGAGAGCGGTACAGAGCAGAGTTTTCTCAGC
TTTCTGATATAAACACGCTGAAAAAGGATGCCAAAAAGGCCACTGCTGGA
TGTGAGAAGGGAAGTATTACTCGCAATATGGACATGAAAGCAAAATTGCT
ACAGTTACCGGGACTGGTGACACCCGCTCATCTATGGCAGATCGGACACT
TGGGATCAGATATTGCCCCTGAGAAAGCCTCGTTCTACTCCACGAAGCCA
ATCACTCTATTTGACTGTGATCTTCTGATGGAATTTGACCCCCAGCTTCG
TAAGTCCAACTTACGACTGAAGTGGATATCCAGGCATTTTGTTGCATAA
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protein sequence of Ggra3781.t1

>Ggra3781.t1 ID=Ggra3781.t1|Name=Ggra3781.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=483bp
MDEPKKIRKYIKHVVNVARVLTRGISKENEYRQFIKRNIEREWNNFRKGD
KTAEQIQRNVVDIFYTVFPQHRMKNFIPSFKEFLCEEGGNDNPKQYNIER
RVEQDEGDIQVVPPNKRARNQPAECKKKRASECPTAHPDAKRIKETNSKS
SVSFEDNNEGVEGLERIELNEKENRLEKDENDEELDKSEDQQHWLAMKTS
ESNSTVKRSLLNQVIKRAIKNHRLGNFEEGTLDIIDLAVRIRLKHILKDL
KKYSSIRRRNQKLNLLKPEGNRVNVLLRIDREVEEVRLLRMRDERLAMRQ
SIGNDTDSVESQCIQKNVKTTRTLGLTEYQEFLAGKQKLRKNERQKLEAL
KLENQGRQRYLERYIDKKIRRRRRERYRAEFSQLSDINTLKKDAKKATAG
CEKGSITRNMDMKAKLLQLPGLVTPAHLWQIGHLGSDIAPEKASFYSTKP
ITLFDCDLLMEFDPQLRKSNLRLKWISRHFVA*
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mRNA from alignment at tig00000850_pilon:1656818..1658266-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3781.t1 ID=Ggra3781.t1|Name=Ggra3781.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1449bp|location=Sequence derived from alignment at tig00000850_pilon:1656818..1658266- (Gracilaria gracilis GNS1m male)
ATGGACGAGCCGAAGAAAATTAGAAAGTACATTAAACACGTTGTGAATGT
TGCAAGAGTTCTTACGCGAGGTATTTCAAAGGAGAACGAATATCGGCAGT
TCATTAAACGGAATATTGAGCGAGAATGGAACAATTTTCGAAAAGGGGAC
AAAACGGCAGAACAGATTCAGAGAAATGTCGTGGACATATTCTACACAGT
GTTTCCGCAACATCGGATGAAAAACTTTATCCCATCTTTCAAGGAATTCC
TCTGTGAAGAAGGGGGAAATGATAATCCAAAGCAATACAACATTGAACGA
AGGGTGGAGCAGGACGAAGGAGATATACAGGTTGTGCCTCCTAATAAAAG
GGCTCGAAATCAGCCTGCAGAGTGCAAAAAGAAAAGGGCAAGTGAATGCC
CTACAGCCCACCCAGACGCCAAAAGAATCAAAGAGACAAACTCCAAAAGC
AGCGTATCCTTTGAGGACAACAATGAGGGAGTGGAAGGGCTCGAAAGGAT
AGAACTCAATGAGAAAGAGAATAGGCTGGAAAAAGATGAAAACGACGAGG
AGTTAGATAAATCTGAAGATCAGCAACACTGGTTGGCAATGAAAACTTCA
GAGAGTAATAGCACAGTGAAAAGGAGTCTCCTGAACCAAGTTATTAAACG
AGCTATCAAGAATCATAGATTGGGTAATTTCGAGGAGGGTACTCTCGACA
TCATTGACTTGGCTGTTCGAATTCGTCTGAAGCACATATTGAAGGATTTG
AAGAAGTATTCGAGTATTCGGCGACGGAATCAGAAGCTCAACCTCTTGAA
ACCCGAGGGAAATCGCGTCAACGTTCTACTAAGAATAGACCGTGAAGTAG
AAGAAGTTCGTCTTCTTCGTATGCGGGACGAAAGATTAGCCATGAGGCAG
TCAATTGGGAATGATACGGACAGCGTTGAATCTCAATGTATACAGAAGAA
TGTGAAGACGACTCGGACTTTGGGATTAACCGAGTACCAGGAGTTTCTGG
CTGGCAAGCAAAAGCTGAGAAAAAATGAAAGACAGAAATTGGAAGCACTT
AAGCTTGAAAATCAAGGTAGGCAAAGGTACTTGGAAAGGTATATCGACAA
AAAGATAAGAAGGCGAAGAAGAGAGCGGTACAGAGCAGAGTTTTCTCAGC
TTTCTGATATAAACACGCTGAAAAAGGATGCCAAAAAGGCCACTGCTGGA
TGTGAGAAGGGAAGTATTACTCGCAATATGGACATGAAAGCAAAATTGCT
ACAGTTACCGGGACTGGTGACACCCGCTCATCTATGGCAGATCGGACACT
TGGGATCAGATATTGCCCCTGAGAAAGCCTCGTTCTACTCCACGAAGCCA
ATCACTCTATTTGACTGTGATCTTCTGATGGAATTTGACCCCCAGCTTCG
TAAGTCCAACTTACGACTGAAGTGGATATCCAGGCATTTTGTTGCATAA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1656818..1658266-

>Ggra3781.t1 ID=Ggra3781.t1|Name=Ggra3781.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1449bp|location=Sequence derived from alignment at tig00000850_pilon:1656818..1658266- (Gracilaria gracilis GNS1m male)
ATGGACGAGCCGAAGAAAATTAGAAAGTACATTAAACACGTTGTGAATGT
TGCAAGAGTTCTTACGCGAGGTATTTCAAAGGAGAACGAATATCGGCAGT
TCATTAAACGGAATATTGAGCGAGAATGGAACAATTTTCGAAAAGGGGAC
AAAACGGCAGAACAGATTCAGAGAAATGTCGTGGACATATTCTACACAGT
GTTTCCGCAACATCGGATGAAAAACTTTATCCCATCTTTCAAGGAATTCC
TCTGTGAAGAAGGGGGAAATGATAATCCAAAGCAATACAACATTGAACGA
AGGGTGGAGCAGGACGAAGGAGATATACAGGTTGTGCCTCCTAATAAAAG
GGCTCGAAATCAGCCTGCAGAGTGCAAAAAGAAAAGGGCAAGTGAATGCC
CTACAGCCCACCCAGACGCCAAAAGAATCAAAGAGACAAACTCCAAAAGC
AGCGTATCCTTTGAGGACAACAATGAGGGAGTGGAAGGGCTCGAAAGGAT
AGAACTCAATGAGAAAGAGAATAGGCTGGAAAAAGATGAAAACGACGAGG
AGTTAGATAAATCTGAAGATCAGCAACACTGGTTGGCAATGAAAACTTCA
GAGAGTAATAGCACAGTGAAAAGGAGTCTCCTGAACCAAGTTATTAAACG
AGCTATCAAGAATCATAGATTGGGTAATTTCGAGGAGGGTACTCTCGACA
TCATTGACTTGGCTGTTCGAATTCGTCTGAAGCACATATTGAAGGATTTG
AAGAAGTATTCGAGTATTCGGCGACGGAATCAGAAGCTCAACCTCTTGAA
ACCCGAGGGAAATCGCGTCAACGTTCTACTAAGAATAGACCGTGAAGTAG
AAGAAGTTCGTCTTCTTCGTATGCGGGACGAAAGATTAGCCATGAGGCAG
TCAATTGGGAATGATACGGACAGCGTTGAATCTCAATGTATACAGAAGAA
TGTGAAGACGACTCGGACTTTGGGATTAACCGAGTACCAGGAGTTTCTGG
CTGGCAAGCAAAAGCTGAGAAAAAATGAAAGACAGAAATTGGAAGCACTT
AAGCTTGAAAATCAAGGTAGGCAAAGGTACTTGGAAAGGTATATCGACAA
AAAGATAAGAAGGCGAAGAAGAGAGCGGTACAGAGCAGAGTTTTCTCAGC
TTTCTGATATAAACACGCTGAAAAAGGATGCCAAAAAGGCCACTGCTGGA
TGTGAGAAGGGAAGTATTACTCGCAATATGGACATGAAAGCAAAATTGCT
ACAGTTACCGGGACTGGTGACACCCGCTCATCTATGGCAGATCGGACACT
TGGGATCAGATATTGCCCCTGAGAAAGCCTCGTTCTACTCCACGAAGCCA
ATCACTCTATTTGACTGTGATCTTCTGATGGAATTTGACCCCCAGCTTCG
TAAGTCCAACTTACGACTGAAGTGGATATCCAGGCATTTTGTTGCATAA
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