Ggra10177.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10177.t1
Unique NameGgra10177.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length493
Homology
BLAST of Ggra10177.t1 vs. uniprot
Match: A0A2V3IJ65 (Vesicle-associated membrane protein-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ65_9FLOR)

HSP 1 Score: 679 bits (1751), Expect = 1.470e-241
Identity = 336/493 (68.15%), Postives = 400/493 (81.14%), Query Frame = 0
Query:    1 MPTILSTPPPAKVPEPKTPPPLRNTKSYGLAQTHRDATDTFFTTEPARRFIFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWNLVPGNAVRKRTLGVVVKQSAFYIPMEKLITFKPATLAFVPSTNPNGSCCSHLDVTNVSEFPILFKMKTTNQMGYVVRPRVGIIDPHQDYRIELSSQPKSKRMDINGEIAANPIVPVSRPTSHDKFKLEIAAVHSENLLGNVTPQDLWPRVLAGDVSTMLFPVLRNADPRKLSPSELPDHAAHRLH-DAFKRLNSNGGAGKLQLSTFVDTLDDVLFWTPKVLRLRAENDAEQQPSILHLSNISDKTLLYRIVTANRGLYEIYPQKDIIAPYDSLNVSVSMQNLKISSQNWESLSDEAAIEVTSIDLKPDESLDKDDNDLDDMWTSVEEKDVLKVKFDVQIRNAL 492
            MPTIL TPP    P PKTPPP++ ++  G +++ +   DTFF   PARR IFRSALD+ S +TLKITN S E LLYKVKTNEHRTY VK GSG++EP  +VEV++IQR LRVFPRPQD+ARHRFLV+ APIS+       KPD A +LW+ VP  +V KRTLGV+V+QSAFYIP+++LITFKP+ LAFVPS +PNGSCCSHLDVTN+S+FP+LFKMKTTNQMGYVVRPRVGI+DP Q YRIELSSQPKSKRMD NGEI ANPIVPVSRPTSHDKFKLE+ AV SE+LLGNVTPQDLWPRVL GDVST++FPVLRNADPRKLSPSELPD AAHRL  D    L  NG +   +  +FVDTL+D+LFWTPK LRLRA+ND+ QQ SILHLSNIS+KTLLYRI T N GLYE +PQ D+I  YDS+N+SV++QNL +   NW SLSD+A+IEV  I +K + S +KD+NDL+DMW+S+ E+D++K  F +QI N L
Sbjct:    1 MPTILRTPPSGSAPAPKTPPPIKPSQPNGSSESTQTDPDTFFKCHPARRLIFRSALDKHSAQTLKITNTSTEPLLYKVKTNEHRTYVVKFGSGIVEPDCSVEVEVIQRALRVFPRPQDIARHRFLVVTAPISAVSTGGIGKPDNATELWSRVPAASVIKRTLGVIVQQSAFYIPVDQLITFKPSILAFVPSQDPNGSCCSHLDVTNISDFPVLFKMKTTNQMGYVVRPRVGILDPKQTYRIELSSQPKSKRMDANGEITANPIVPVSRPTSHDKFKLEVTAVQSESLLGNVTPQDLWPRVLPGDVSTVVFPVLRNADPRKLSPSELPDRAAHRLQADIDSSLALNGSSRIRRSGSFVDTLEDILFWTPKTLRLRAQNDSGQQASILHLSNISEKTLLYRIKTPNTGLYEFFPQMDLIPAYDSVNISVNVQNLTVMCDNWVSLSDKASIEVAKIHVKLEGSFNKDENDLEDMWSSIPEEDIMKASFPIQIHNRL 493          
BLAST of Ggra10177.t1 vs. uniprot
Match: A0A1R3I7H0 (Major sperm protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I7H0_COCAP)

HSP 1 Score: 82.0 bits (201), Expect = 1.160e-13
Identity = 62/215 (28.84%), Postives = 103/215 (47.91%), Query Frame = 0
Query:   52 FRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWNLVPGNAVRKRTLGVVVKQSAFYIPMEKLITFKPAT-----------LAFVPSTNPNGSCCSHLDVTNVSEFPILFKMKTTNQMGYVVRPRVGIIDPHQDYRIELSSQ-PKSKRMDI 254
            F   L + S+ +L++TNNS   + + VKT   + Y V+  +G++ P +T  V +  +  +  P P  + + +FL+++     AP   TV  D  +D++N   G  V +  L V+ +          L+  +PA            L F+       S  S+L +TN SE  + FK+KTTNQ  Y VRP +GI+ P     + ++ Q PK    D+
Sbjct:   16 FLVELRKQSSSSLRLTNNSENCVAFMVKTTNPKKYCVRPNTGIVLPGSTCSVTVTMQAPKELP-PDMLCKDKFLLLSVV---APEGATVN-DITSDMFNKGNGRVVEEFKLRVIYEAMT----AGNLLHIQPALTXXXXXXXXTELKFLVELRKQSS--SYLRLTNNSEKYVAFKVKTTNQKNYCVRPNIGIVLPGSTCSVTVTMQAPKDSLPDM 219          
BLAST of Ggra10177.t1 vs. uniprot
Match: A0A1X2GP17 (MSP domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GP17_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 5.260e-9
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   52 FRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWNLV 152
            F+  L QP  E LK+TNN P  + +KVKT   + Y VK  SG+IEP+ +++VQ++ +P +  P      + +F+V  API  +    ++      +LW +V
Sbjct:   14 FKRPLTQPIEEYLKVTNNGPVPIAFKVKTTAPKRYCVKPNSGIIEPNVSIDVQVVFQPFKEEPALDTKCKDKFMVQTAPIEESWRGYSMM-----ELWGIV 109          
BLAST of Ggra10177.t1 vs. uniprot
Match: A0A168PPC4 (MSP domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168PPC4_ABSGL)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-8
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   45 EPARRFIFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWNLV 152
            +P  + +FR  L QP  E L++ N   E + +KVKT   + Y V+  SG+I+P + VEVQ+I +P +  P P    + +FLV  A          VKPD     WN+V
Sbjct:    6 DPPSQLVFRRPLTQPIEEFLQVRNVGTEPMAFKVKTTAPKQYCVRPNSGIIQPSSHVEVQVIFQPFKEEPAPDFKCKDKFLVQTA---------VVKPDWVD--WNMV 102          
BLAST of Ggra10177.t1 vs. uniprot
Match: A0A0N1HHL0 (Vesicle-associated membrane protein-associated protein C16G5.05c n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1HHL0_9EURO)

HSP 1 Score: 63.2 bits (152), Expect = 1.820e-7
Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   52 FRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWNLVPGNAVRK 159
            F+   D+  TETLK+TN+   T+ +KVKT   + Y V+  SGLI+P++ VEVQ++ + ++  P      R +FLV +  I  +        ++   LW+ +   A  K
Sbjct:   12 FKRPFDREVTETLKLTNHGDSTVAFKVKTTAPKQYCVRPNSGLIQPNSNVEVQVLLQAMKDEPPLDYKCRDKFLVQSVDIEGSHT----SDESVTALWSNIEKTAKSK 115          
BLAST of Ggra10177.t1 vs. uniprot
Match: G0W3B4 (MSP domain-containing protein n=1 Tax=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) TaxID=1071378 RepID=G0W3B4_NAUDC)

HSP 1 Score: 62.8 bits (151), Expect = 2.390e-7
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   52 FRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWN 150
            ++S L + STE   ITNNS +T+ +KVKT   + Y V+  + ++EP  TV++Q+I   L   P      R +FLVI  P   AP   T K    +++WN
Sbjct:   13 YKSPLIEQSTEYASITNNSEQTIAFKVKTTAPKFYCVRPNAAIVEPGETVQIQVIFLGLTEEPASDFKCRDKFLVITLP---APYDLTNKN--VSEIWN 106          
BLAST of Ggra10177.t1 vs. uniprot
Match: Vesicle-associated membrane protein-associated protein SCS2 n=1 Tax=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) TaxID=559292 RepID=UPI0018FE02A6 (Vesicle-associated membrane protein-associated protein SCS2 n=1 Tax=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) TaxID=559292 RepID=UPI0018FE02A6)

HSP 1 Score: 59.7 bits (143), Expect = 2.800e-7
Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   51 IFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWN 150
            +++S L + STE   I+NNS +T+ +KVKT   + Y V+  + ++ P  T++VQ+I   L   P      R +F+VI     + P+   +   A AD+W+
Sbjct:   12 VYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFMVI-----TLPSPYDLNGKAVADVWS 106          
BLAST of Ggra10177.t1 vs. uniprot
Match: G8BTD7 (MSP domain-containing protein n=1 Tax=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) TaxID=1071381 RepID=G8BTD7_TETPH)

HSP 1 Score: 62.0 bits (149), Expect = 2.910e-7
Identity = 40/98 (40.82%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   52 FRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLW 149
            F+S     STE   ITNNS ET+ +KVKT   + Y V+  + ++ P  TV+VQII   L   P      R +FLVI  P   AP     KP   AD+W
Sbjct:   13 FKSPFTVQSTEYASITNNSNETIAFKVKTTAPKFYCVRPNAAVVAPGETVQVQIILLGLSEEPAADFKCRDKFLVITLP---APYDLDGKP--VADVW 105          
BLAST of Ggra10177.t1 vs. uniprot
Match: SCS2 (Vesicle-associated membrane protein-associated protein SCS2 n=14 Tax=Saccharomyces TaxID=4930 RepID=SCS2_YEAST)

HSP 1 Score: 60.5 bits (145), Expect = 1.170e-6
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   51 IFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWN 150
            +++S L + STE   I+NNS +T+ +KVKT   + Y V+  + ++ P  T++VQ+I   L   P      R +FLVI     + P+   +   A AD+W+
Sbjct:   12 VYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVI-----TLPSPYDLNGKAVADVWS 106          
BLAST of Ggra10177.t1 vs. uniprot
Match: H0GU17 (Scs2p n=1 Tax=Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7) TaxID=1095631 RepID=H0GU17_SACCK)

HSP 1 Score: 60.5 bits (145), Expect = 1.170e-6
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   51 IFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTTVEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWN 150
            +++S L + STE   I+NNS +T+ +KVKT   + Y V+  + ++ P  T++VQ+I   L   P      R +FLVI     + P+   +   A AD+W+
Sbjct:   12 VYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVI-----TLPSPYDLNGKAVADVWS 106          
The following BLAST results are available for this feature:
BLAST of Ggra10177.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3IJ651.470e-24168.15Vesicle-associated membrane protein-associated pro... [more]
A0A1R3I7H01.160e-1328.84Major sperm protein n=1 Tax=Corchorus capsularis T... [more]
A0A1X2GP175.260e-934.65MSP domain-containing protein n=1 Tax=Hesseltinell... [more]
A0A168PPC41.410e-836.11MSP domain-containing protein n=1 Tax=Absidia glau... [more]
A0A0N1HHL01.820e-732.41Vesicle-associated membrane protein-associated pro... [more]
G0W3B42.390e-737.37MSP domain-containing protein n=1 Tax=Naumovozyma ... [more]
Vesicle-associated membrane protein-associated protein SCS2 n=1 Tax=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) TaxID=559292 RepID=UPI0018FE02A62.800e-732.00Vesicle-associated membrane protein-associated pro... [more]
G8BTD72.910e-740.82MSP domain-containing protein n=1 Tax=Tetrapisispo... [more]
SCS21.170e-633.00Vesicle-associated membrane protein-associated pro... [more]
H0GU171.170e-633.00Scs2p n=1 Tax=Saccharomyces cerevisiae x Saccharom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 179..285
e-value: 2.1E-12
score: 46.8
coord: 43..133
e-value: 2.2E-16
score: 59.7
coord: 372..452
e-value: 5.1E-7
score: 29.5
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 41..167
score: 21.35676
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 362..489
score: 13.247963
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 178..315
score: 16.395313
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 357..488
e-value: 3.1E-13
score: 51.7
coord: 173..309
e-value: 9.0E-15
score: 56.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 38..164
e-value: 7.1E-20
score: 73.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR10809:SF6VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN Acoord: 52..158
NoneNo IPR availablePANTHERPTHR10809:SF6VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN Acoord: 379..486
coord: 175..251
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 52..158
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 379..486
coord: 175..251
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 172..300
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 366..487
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 38..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:11102..12580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10177.t1Ggra10177.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 11102..12580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10177.t1 ID=Ggra10177.t1|Name=Ggra10177.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=493bp
MPTILSTPPPAKVPEPKTPPPLRNTKSYGLAQTHRDATDTFFTTEPARRF
IFRSALDQPSTETLKITNNSPETLLYKVKTNEHRTYAVKSGSGLIEPHTT
VEVQIIQRPLRVFPRPQDVARHRFLVIAAPISSAPNRTTVKPDAAADLWN
LVPGNAVRKRTLGVVVKQSAFYIPMEKLITFKPATLAFVPSTNPNGSCCS
HLDVTNVSEFPILFKMKTTNQMGYVVRPRVGIIDPHQDYRIELSSQPKSK
RMDINGEIAANPIVPVSRPTSHDKFKLEIAAVHSENLLGNVTPQDLWPRV
LAGDVSTMLFPVLRNADPRKLSPSELPDHAAHRLHDAFKRLNSNGGAGKL
QLSTFVDTLDDVLFWTPKVLRLRAENDAEQQPSILHLSNISDKTLLYRIV
TANRGLYEIYPQKDIIAPYDSLNVSVSMQNLKISSQNWESLSDEAAIEVT
SIDLKPDESLDKDDNDLDDMWTSVEEKDVLKVKFDVQIRNAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000535MSP_dom
IPR013783Ig-like_fold
IPR016763VAP
IPR008962PapD-like_sf