Ggra5552.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5552.t1
Unique NameGgra5552.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length258
Homology
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BLAST of Ggra5552.t1 vs. uniprot
Match: A0A2V3IU77 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU77_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 1.170e-28
Identity = 79/249 (31.73%), Postives = 135/249 (54.22%), Query Frame = 0 
Query:   15 TNRVLILSYTDSDRSLKLLYERFPSIRSNRVRLTTRYFNADIPFHMKTVTQPPGLLDNLEFVQSLQTVPAVVIVSNTCDDIPDCQRVWSNIKNSVREDAARVLLLFED-LSSRENQNLIEWAAVNAIEIVSRYSCEGDSVSQRLLEILACAPWRILS--KPAPSCNGAEKADTNTERL---KEQANCSYPQKLEGQERSASEVVSSEVGDETI--LDLSKATRLRRGLRDKDISNILDDLL-LADSDGD 254
            TN +LI+S ++ +       +    I   R+ L T+YF  D  F + +V     L++     ++L + PA++I+S   +D+P+ Q+VW+ +++ + EDA +  ++ +  L   E+  L EWA  N IE +S+ +CEG ++S ++ ++L CAPW   S  K  P  N A++  T  +     +  A   +  K   +   ++   ++EV  E      LS +TRLRRGL D D+SN++ +LL LADSD D
Sbjct:   15 TNSLLIVSNSNPEEITDFFRQNSIPIEGKRLHLQTKYFEVDAAFLVLSVNFIWDLMETRAQAETLGSFPAIMILSLCSEDVPEYQKVWTRLEHHLGEDATKGFVVADRILGVEEDHRLDEWAGFNHIEFISQCTCEGVAISNKIRQLLECAPWLSPSPIKTVPFLNNAKRGSTWDQVPIPGETTAEDGFTSKCSNEPMPSNVNTNTEVETERCGTPSLSSSTRLRRGLGDADVSNLVAELLTLADSDDD 263
The following BLAST results are available for this feature:
BLAST of Ggra5552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU771.170e-2831.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:911800..912573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5552.t1Ggra5552.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 911800..912573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5552.t1 ID=Ggra5552.t1|Name=Ggra5552.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bp
MASGADLTLDISFPTNRVLILSYTDSDRSLKLLYERFPSIRSNRVRLTTR
YFNADIPFHMKTVTQPPGLLDNLEFVQSLQTVPAVVIVSNTCDDIPDCQR
VWSNIKNSVREDAARVLLLFEDLSSRENQNLIEWAAVNAIEIVSRYSCEG
DSVSQRLLEILACAPWRILSKPAPSCNGAEKADTNTERLKEQANCSYPQK
LEGQERSASEVVSSEVGDETILDLSKATRLRRGLRDKDISNILDDLLLAD
SDGDDSE*
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