Ggra5714.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5714.t1
Unique NameGgra5714.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length679
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5714.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009818Ataxin-2, C-terminalPFAMPF07145PAM2coord: 44..57
e-value: 7.8E-6
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..589
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1424712..1427314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5714.t1Ggra5714.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1424712..1427314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5714.t1 ID=Ggra5714.t1|Name=Ggra5714.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=679bp
MIPQPIPQSPKPPSESQQTIHLDPNAAEFVPASVEQPHHHLLQSSSLNPN
APEFVPGRPAPTTPQICLNPAAEEFVPFHHHALLYAQQCVSNPSIHPHLQ
LLPPTFETKASNLSSISLNPEADEFVPASLTKPDVHFEWSEPQNSTCAWD
LPPPSDTSSEEALERSKVWWSTEHDARNELHSSSPQPHERDAAIEDKESG
QWPSQQYLDEWAVEREGSAGEMEPALDNRWRIHQDVEKKDQITPLMNCSK
AQHLHGAQESIGDENSQVKTKKKKRKKKKKKAEKPTERPLTRKEYSSNDE
YDKFPGSWNERNCFRERHDSKWNHHTHAAQKESTADAASSMQNENLDAST
MGGKLMDKRLEKGNPYAINSNHINQSSSAVEVQNSNNSYMYDGLQQENSW
NIEENSLINRDSKWDENEPEEQKNHDIWHEYELEAQQNHDMVENNKKDSS
QTEQGDDDKSVRTLNDREGKNRGTRKKLKARRGTIKGDEVHQHGSNQGGR
DLRQVDDGSERESTECDAWEAIENQDAWNGESPYDESDFRGFGIAKDPEK
SSKEQRETMKTIQEMKSTEDSDLKAWKSSGEENAPRMSGFDISCDRTLMG
KGWGRLGSEEKGIPSDSWLNAGESPLSFANEATKDMWALPATEANEEETD
SADLTPQQIREKTDFIGREQVVYDLSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009818Ataxin-2_C