Ggra5699.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5699.t1
Unique NameGgra5699.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length351
Homology
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A2V3IY90 (Hint domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY90_9FLOR)

HSP 1 Score: 338 bits (866), Expect = 6.540e-112
Identity = 175/329 (53.19%), Postives = 230/329 (69.91%), Query Frame = 0
Query:   25 SLLLCRA---HALNLTDLGGPYIRRVNVDACPAFVDFMPGDVSQSIALMSVEGHACSEGQLRFTTDVPSDTLAFYISGDPN-RDVLLVALVPEP-LRCGRFQFDQRATFTLLSTKRNVSVIWKNVLATVNSTLAQALGSEQYTFVANQSHLLIDDRCLYTRITQQEFNNQRGEKCFPSSANLIAPFGT-RSISSLQSAHLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAALGIDFLS 347
            SLLL  A    AL+  DLGGPY+ RVN   CP FVDF PGD S+ +ALM+V+G ACS G+ RF      DT+A ++  +P+ RD +L  LVP   L C RF FD+RATFT  +   ++SV   + L  VNS+LA ALG + YTF AN SHLLI+D+CLYTR+TQ+EF+ Q+GEKCFP+SA +    G  R I  L +A LVAD   FT  IGWTH+DP F+GWFLR+++  N + T++H HYV+++ G++ A++L +  +LRT  GW+P+TA+  VW RGLYNVQT SG + VD ILC+TYTKAV P+ AHALLAP+R+ A  G+  LS
Sbjct:    7 SLLLLHALAVSALSRNDLGGPYLLRVNGSTCPRFVDFKPGDPSRDVALMAVDGRACSAGEFRFADRARVDTIAAFLRPEPSVRDWIL--LVPRAVLVCDRFSFDRRATFTFAAPLMDLSVDLDSALGRVNSSLAVALGDDTYTFEANVSHLLINDQCLYTRMTQEEFDRQKGEKCFPASATVTTQHGAPRRIQHLATAQLVADGRAFTHTIGWTHRDPHFEGWFLRISLR-NVSATMSHGHYVYSKRGLITADELAVGTMLRTAYGWQPVTAVERVWRRGLYNVQTASGRLLVDHILCSTYTKAVPPVLAHALLAPVRMCAPFGLHLLS 332          
BLAST of Ggra5699.t1 vs. uniprot
Match: R7Q8Q4 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q4_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 3.920e-23
Identity = 73/273 (26.74%), Postives = 121/273 (44.32%), Query Frame = 0
Query:   70 MSVEGHACSEGQLRFTTD--VPSDTLAFYISGDPNRDVLLVALVPEPLRCGRFQFDQRATFTLLSTKRNVSVIWKNVLATVNSTLAQALGSEQYTFVANQSHLLIDDRCLYTRITQQEFNNQRGEKCFPSSANLIAPFG---TRSISSLQSAHLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGW-RPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIR 336
            +S++   C  G +    D  + +   AF+          L   V   +RC            L+     +  +    + + +S +A    ++++ F  ++ ++ + ++C Y      E N     +CFP+ A +    G   T     +    LVAD T ++ +  WTH        ++ +       +  T  HYVH     L    +R  M++RT  G    +TA+RTV  +GLYN QT  GD+ V+G++ TTYT AV P  AHALLAP+R
Sbjct:   57 ISLQDAKCEGGNINLADDGEITNQVTAFFEKNSGTVGSFLAGPVASEIRCDTNSLAAETVVVLVRPDDELDDVPFTDIVSEDSGIATNTDNDKWDFEEDRKYIFLGNKCFYA-----ETNIGDRVECFPADATVTLQSGQVKTMDTVRIGDRVLVADGT-YSDVFAWTHHTSKSALSYIAVETDLGNRLVTTAGHYVHADGATLQMRDVRKGMVMRTAEGADATVTAVRTVKAKGLYNPQTTHGDIVVNGLIATTYTDAVQPGAAHALLAPVR 323          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A2V3IE18 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE18_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 3.720e-17
Identity = 51/148 (34.46%), Postives = 87/148 (58.78%), Query Frame = 0
Query:  192 EKCFPSSANLIAPFG-TRSISSLQSA-HLVADATGFT-PIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIR 336
            E CFP+SA +    G T  ++ L++  H+  D  G + P+  +TH+    + WF R++ A    +++T  HY++    ++AA  +++  ++RT +G   +  +  V D GLY   +  GDV VDGI+C++Y++AV P  AHALL P+R
Sbjct:  295 EVCFPASATVTTADGSTVRMADLEAGQHIQHDEHGASSPVFLFTHRTLKREQWFYRISTASGHAVSITGNHYLYVNERLVAAHAVQVGNVVRTMSGPSAVVKVERVKDVGLYAPHSLHGDVVVDGIVCSSYSRAVAPGLAHALLLPLR 442          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A2V3III2 (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 9.800e-15
Identity = 57/152 (37.50%), Postives = 80/152 (52.63%), Query Frame = 0
Query:  191 GEKCFPSSANLIAPFGTRSISSLQSAHLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLR-----LRMLLRTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAH-ALLAPIR 336
            G  CFP+SA + +  GT  +  L+    V  A G++ +I +TH+       F++L       +TVT  HYV+ ++G LAA         LRM   + +G   I  I  V   GLYN QT SG + V+G + +TYT AV P  AH ALL P+R
Sbjct:  371 GSACFPASARVYSSRGTVPMQDLKIGDRVKTANGYSDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDG--TIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVR 520          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A2V3J5K7 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 2.850e-14
Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 0
Query:  194 CFPSSANLIAPFGT--RSISSLQSAHLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAAL-GIDFLSYVL 350
            CFP SA++    G+  R         ++     ++ I  ++H+D   +  F  L  +    I+ T  H+++  +  +  E++++   LRT  G   +  +   W +GLYN QT  GD+ V+G++ +TYTK+V P  AHA LAP+R ++ +  +D L ++L
Sbjct:  324 CFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLRAISTVCRVDMLGWLL 483          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A1X6P3Z4 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 1.060e-13
Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 0
Query:  194 CFPSSANLIAPFGTRSISSLQSA---HLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRP--ITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRIL 338
            CFP+SA +    G R+++  Q A   ++   A  F+ +  +THK       F++LT A   ++TVT  HYV+    + AA  ++L   L      +   ITA   V + GLYN QT  GD+FV+GI  +T+T AV P  A ALLAP+R L
Sbjct:  208 CFPASAQVELDTG-RTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRAL 356          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A1X6P5D5 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5D5_PORUM)

HSP 1 Score: 80.9 bits (198), Expect = 3.550e-13
Identity = 80/307 (26.06%), Postives = 128/307 (41.69%), Query Frame = 0
Query:   61 GDVSQSIALMSVEGHACSEGQLRFTTDVPSDTLAFYISGDPNRDVLLVALVPEPLRCGRFQFDQRATFTLLSTKRNVSVIWKNVLATVNSTLAQALGSEQ------YTFVANQSHLLIDDRCLYTRITQQEFNNQRGEK----------CFPSSANLIAPFG-TRSISSLQSAHLVADATG-----FTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLL--RTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAALGI 343
            G V Q +AL+  E    +    R           +++    N DV +     +  +CGR + + R TF   +          NV  TV+  L   L  E+      YT  +N    L +  C+YT +   E     G            CFP++A      G T S+++L+    V  A G     F+ +  +TH+       F+  T A   +++ +  HYV+    +   + +R+   L          + A+ T    GL+N QT +GD+ V G+  +TYT AV P  A ALL+P+R L  LG+
Sbjct:  136 GAVGQVVALLGEENADAASLVARM--------FRYFVDKIANEDVKIGGATEDDRQCGRREVEGR-TFIAAA----------NVSETVSVGLGSGLSLEEGRYLITYTLESNPVSALDNPLCIYTGLADGEAPRGSGGGATGPSTDEGVCFPAAATAELDSGATVSMANLEIGDRVRVAAGTGPNAFSEVFTFTHRKRTGTYPFVTATTASGHSLSASPGHYVYVNGHLAPMQSVRVGDALDVAATGTHSRVVAVATAEQTGLFNPQTLAGDIVVGGVRASTYTTAVAPRLAAALLSPLRGLYRLGV 423          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A1X6P3Y5 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Y5_PORUM)

HSP 1 Score: 80.9 bits (198), Expect = 4.770e-13
Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 0
Query:  194 CFPSSANLIAPFGTRSISSLQSA---HLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRP--ITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRIL 338
            CFP+SA +    G R+++  Q A   ++   A  F+ +  +THK       F++LT A   ++TVT  HYV+    + AA  ++L   L      +   +TAI  + + GLYN QT  GD+ V+GI  +T+T AV P  A ALLAP+R L
Sbjct:  429 CFPASAEVELDTG-RTVTMDQLAVGDNVRVSADAFSRVFLFTHKIATGSFGFVKLTTASAASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIVTAISPITETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRAL 577          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A7S3AAJ1 (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3AAJ1_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 5.460e-13
Identity = 45/158 (28.48%), Postives = 87/158 (55.06%), Query Frame = 0
Query:  194 CFPSSANL-IAPFGTRSISSLQSAHLV-ADATGFTPIIGWTHKDPLFQGWFLRLTIAHNTTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWR-PITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAALGIDFLSY 348
            CFP  A++ +A    +++  LQ    V   A+ ++ +  + HKD      F+ +    + +I+++  HY++    +++AE+++   +L    G +  +T +R     G++   T +GD+ V+G+  +TYT+ VHP  AH LLAP+R L  LG+  L++
Sbjct:   34 CFPGDASVELADGSMKTMRELQVGDSVRVGASEYSDVYFFGHKDSFGSAEFITIEGRDSVSISLSSLHYLYVNGSLVSAEEVKEGDVLELSTGEKMAVTDVRKEMKIGVFAPHTLNGDIVVNGVRASTYTRVVHPEFAHLLLAPLRFLYRLGLPALTF 191          
BLAST of Ggra5699.t1 vs. uniprot
Match: A0A1X6NWZ1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWZ1_PORUM)

HSP 1 Score: 80.5 bits (197), Expect = 6.720e-13
Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 0
Query:  194 CFPSSANLIAPFGTR-SISSLQSAHLVADATG-FTPIIGWTHKDPLFQGWFLRLTIA--------HNTTITVTHRHYVHTRHGILAAEQLRLR-MLLRTRNGWRPITAIRTVWDRGLYNVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAALG 342
            CFP+ A +    G    + +L     VA   G F+ +  +TH D      F+ LT+A        H T++ +T  HY+    G+ AA  + +   L+R       +T +      GLYN QT  G + VDGI+ +TYT AV P  AHA LAP+R L A+G
Sbjct:  474 CFPADATVTLASGAAVRMDALAVGDAVAVGGGRFSEVFAFTHADAAAVSAFVELTVASPADACAAHPTSLRLTPGHYLSVNGGLAAASTVVVGDRLVRADGSAAVVTQVSAARRAGLYNPQTVDGAILVDGIVTSTYTTAVEPRLAHAALAPLRALYAVG 633          
The following BLAST results are available for this feature:
BLAST of Ggra5699.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY906.540e-11253.19Hint domain-containing protein n=1 Tax=Gracilariop... [more]
R7Q8Q43.920e-2326.74HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IE183.720e-1734.46Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3III29.800e-1537.50Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3J5K72.850e-1429.38Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A1X6P3Z41.060e-1338.00HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P5D53.550e-1326.06HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3Y54.770e-1336.67HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S3AAJ15.460e-1328.48Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A1X6NWZ16.720e-1334.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 194..320
e-value: 4.0E-15
score: 58.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..350
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 192..341
e-value: 2.6E-9
score: 36.9
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 194..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1390561..1391613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5699.t1Ggra5699.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1390561..1391613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5699.t1 ID=Ggra5699.t1|Name=Ggra5699.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=351bp
MPHVRPQLAGSTAPSAPFVLSVLLSLLLCRAHALNLTDLGGPYIRRVNVD
ACPAFVDFMPGDVSQSIALMSVEGHACSEGQLRFTTDVPSDTLAFYISGD
PNRDVLLVALVPEPLRCGRFQFDQRATFTLLSTKRNVSVIWKNVLATVNS
TLAQALGSEQYTFVANQSHLLIDDRCLYTRITQQEFNNQRGEKCFPSSAN
LIAPFGTRSISSLQSAHLVADATGFTPIIGWTHKDPLFQGWFLRLTIAHN
TTITVTHRHYVHTRHGILAAEQLRLRMLLRTRNGWRPITAIRTVWDRGLY
NVQTRSGDVFVDGILCTTYTKAVHPITAHALLAPIRILAALGIDFLSYVL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf