Ggra5556.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5556.t1
Unique NameGgra5556.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length159
Homology
BLAST of Ggra5556.t1 vs. uniprot
Match: A0A3Q3H1I2 (Uncharacterized protein n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3H1I2_9LABR)

HSP 1 Score: 59.7 bits (143), Expect = 1.860e-7
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0
Query:   36 SKWKCSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHVADVHHRRNRKACLHFGCSQEFASEVSRMVHEIRAHHS 123
            S+  C  C + F S  YL++H  T+H G+RP+ C +CQK FGQ   L+RH+   H  +N++      CS  FAS  S   H  R +HS
Sbjct:  303 SQSSCLDCGKSFTSEAYLRKHKLTIHKGIRPYVCTVCQKCFGQYSDLNRHLRG-HQIQNKR------CSLAFASAESLQQHT-RENHS 382          
BLAST of Ggra5556.t1 vs. uniprot
Match: histone-lysine N-methyltransferase PRDM9-like isoform X1 n=3 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD3ED4E (histone-lysine N-methyltransferase PRDM9-like isoform X1 n=3 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD3ED4E)

HSP 1 Score: 57.4 bits (137), Expect = 1.210e-6
Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = 0
Query:   36 SKWKCSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHVADVHHRRNRKA-----------CLHFGCSQ---EFASEVSRMVHEIRAH 121
            S+  C  C + F S  YL++H  TVH G+RP+ C +CQK FGQ   L RH+   H  +N+K               FGC++    FASE     H+   H
Sbjct:  435 SQTNCFDCGKSFASEGYLRKHRLTVHKGIRPYVCTVCQKCFGQYSDLKRHLRH-HQGQNKKRKRTYQAPEGSNLTPFGCTECSLAFASEEMLQQHKNENH 533          
BLAST of Ggra5556.t1 vs. uniprot
Match: A0A6J0BWU3 (zinc finger protein 2 homolog n=15 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BWU3_NEOLC)

HSP 1 Score: 56.6 bits (135), Expect = 2.140e-6
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   37 KWKCSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRH 85
            K+KC+ CNR F  R  LK+H  +VH GVRPH+C +C + F +   +  H
Sbjct:  395 KFKCTLCNRSFRDRVRLKEHNQSVHEGVRPHQCDVCGRMFHRSSNMKAH 443          
BLAST of Ggra5556.t1 vs. uniprot
Match: A0A3Q3GSK6 (Uncharacterized protein n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3GSK6_9LABR)

HSP 1 Score: 55.8 bits (133), Expect = 3.030e-6
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0
Query:   36 SKWKCSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHV 86
            S+  C  C + F S  YL++H  T+H G+RP+ C +CQK FGQ   L+RH+
Sbjct:  211 SQSSCLDCGKSFTSEAYLRKHKLTIHKGIRPYVCTVCQKCFGQYSDLNRHL 261          
BLAST of Ggra5556.t1 vs. uniprot
Match: histone-lysine N-methyltransferase PRDM9-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014908786 (histone-lysine N-methyltransferase PRDM9-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014908786)

HSP 1 Score: 55.8 bits (133), Expect = 4.130e-6
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   40 CSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHV 86
            CS C + F S  YL++H  TVH G+RP+ C +CQK FGQ   L+RH+
Sbjct:  425 CSDCGKGFTSDAYLRKHKLTVHKGLRPYVCTVCQKCFGQYSDLNRHL 471          
BLAST of Ggra5556.t1 vs. uniprot
Match: A0A5N5XDB7 (Uncharacterized protein n=1 Tax=Aspergillus leporis TaxID=41062 RepID=A0A5N5XDB7_9EURO)

HSP 1 Score: 55.5 bits (132), Expect = 4.670e-6
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   32 PRRQSKWKCSACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHVADVHHRRNRKA 97
            P ++  + C  C+R F  R  L++H +++H G+R   C+ C +RF +  TLSRH AD  HRR R +
Sbjct:  274 PSQRKSYNCEFCDRPFGRRTDLRRHVDSIHHGIRKFCCEQCGQRFSRHDTLSRHKADGCHRRPRNS 339          
BLAST of Ggra5556.t1 vs. uniprot
Match: D8PS68 (Uncharacterized protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PS68_SCHCM)

HSP 1 Score: 54.7 bits (130), Expect = 8.440e-6
Identity = 30/93 (32.26%), Postives = 43/93 (46.24%), Query Frame = 0
Query:   37 KWKCS--ACNRFFPSRYYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHVADVHHRRNRKACLHFGCSQEFASEVSRMVHEIRAHHSLRAD 127
            KW C    C   F        H NT H G +PH C+IC  RFG   + SRH+ + H +     C   GC+++     + + H  + HH L A+
Sbjct:   61 KWSCDWPGCAMKFAHEGAYNNHMNT-HTGAQPHACRICDHRFGDPSSRSRHMRERHLQPGSYTCCISGCTKQLKRRAAFVDHFKKDHHILDAE 152          
The following BLAST results are available for this feature:
BLAST of Ggra5556.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A3Q3H1I21.860e-739.77Uncharacterized protein n=1 Tax=Labrus bergylta Ta... [more]
histone-lysine N-methyltransferase PRDM9-like isoform X1 n=3 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD3ED4E1.210e-636.00histone-lysine N-methyltransferase PRDM9-like isof... [more]
A0A6J0BWU32.140e-644.90zinc finger protein 2 homolog n=15 Tax=Diprioninae... [more]
A0A3Q3GSK63.030e-645.10Uncharacterized protein n=1 Tax=Labrus bergylta Ta... [more]
histone-lysine N-methyltransferase PRDM9-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00149087864.130e-651.06histone-lysine N-methyltransferase PRDM9-like n=1 ... [more]
A0A5N5XDB74.670e-639.39Uncharacterized protein n=1 Tax=Aspergillus lepori... [more]
D8PS688.440e-632.26Uncharacterized protein n=1 Tax=Schizophyllum comm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 96..121
e-value: 25.0
score: 9.7
coord: 38..61
e-value: 0.022
score: 23.9
coord: 67..90
e-value: 0.0018
score: 27.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 69..91
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 40..61
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 38..66
score: 12.34132
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 67..95
score: 10.200661
NoneNo IPR availablePFAMPF12874zf-metcoord: 38..58
e-value: 0.0011
score: 19.3
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 13..95
e-value: 1.6E-13
score: 52.5
NoneNo IPR availablePANTHERPTHR24394:SF27ZINC FINGER PROTEIN 771coord: 38..140
NoneNo IPR availablePANTHERPTHR24394ZINC FINGER PROTEINcoord: 38..140
NoneNo IPR availablePANTHERPTHR24394:SF27ZINC FINGER PROTEIN 771coord: 35..90
NoneNo IPR availablePANTHERPTHR24394ZINC FINGER PROTEINcoord: 35..90
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 38..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:922453..923082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5556.t1Ggra5556.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 922453..923082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5556.t1 ID=Ggra5556.t1|Name=Ggra5556.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=159bp
MDITDLLIQPVTQGSQFHGQGEQHAASIQIRPRRQSKWKCSACNRFFPSR
YYLKQHTNTVHFGVRPHECKICQKRFGQKGTLSRHVADVHHRRNRKACLH
FGCSQEFASEVSRMVHEIRAHHSLRADRSTYLEAVGHRDKCSCVGCGYAV
FQTFLEDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf