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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 101852.XP_008081492.1 |
| PFAMs | DUF563 |
| Max annot lvl | 4751|Fungi |
| KEGG rclass | RC00005,RC00059 |
| KEGG ko | ko:K18134 |
| KEGG Reaction | R09304,R09676 |
| KEGG Pathway | ko00514,map00514 |
| Evalue | 3.25e-09 |
| EggNOG OGs | KOG4698@1|root,KOG4698@2759|Eukaryota,38DN6@33154|Opisthokonta,3NTZG@4751|Fungi,3QQZ2@4890|Ascomycota,210E7@147548|Leotiomycetes |
| EC | 2.4.1.255 |
| Description | Protein of unknown function (DUF563) |
| COG category | S |
| CAZy | GT41 |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5585.t1.stop1 | Ggra5585.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000842_pilon 1036685..1036687 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5585.t1.start1 | Ggra5585.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000842_pilon 1039328..1039330 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5585.t1 ID=Ggra5585.t1|Name=Ggra5585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=882bp MRFSTVVGADGAPPNSARQWHVSELSSPTSRTRDWDSIPVWQKEKSAERN VTRAEGRRPAIIAKLHSPELDLMPDKGGSSIAEVRLPCRSLSRDLDDVHP RNVPLRRALHRKSLSQRLLGLAMALCIAVGLLGCVMNRLSSELDKIESEL EKRNEIMSGGEGLETHILPQSSLTNPSERRARRLAATTSEAVSKRNFGTH DNQGFLDTMRFHIGTIARLLKFLNYGDEYGTIAALVRTLYKLSETSILPT TKGTTDNAEFTTNSVEPENKTLPSSSNINWVQAGQAVLHNDVQRTAISLK PLQDDLTPTMASTHSHHIPKAAWTGSIFSKTVSGNPTSYNLFSSTTGNTN SLQNQALIPGHHEKTNTTRSESVHMSLTHVQKEQIPFSPDAHTDHRTDAS FVPASYSAPTQVHLVEGIVLWELPRGRSLCRVFNVARLSDGTLFLPKWME KHKEMLAAHCGLKNVMHVFGGQSKDELLKGYSSGKPRFDETFSDRDLFTP HTPRHHMPHFLSDIIPPLVATEVLLGSGREVVPFKCFSAEGKGSTSSCPS LVHDVKPFLFLDMETVSRPPTNWVPSLARFFAHPNIGFELVPDLVLDRSS EPKGLSSLTLLRSVMLTNINPYEPYGLFGSDGKNHVFTYNGISREPTWTS NGMLKRPCTVSVTVLTRQGHRALLELEELQKVIKARFVEQGLDLDFRVVD FKDTCFEDQVRTMQGTNVLIASHGAGNTNLVFMRPGGTVIEVFPFSYKAG PFDGFAKVFGMEYKTAMSAPETNVFKACMRKKEKNPAIMKEVFEKWDKAV EEDKATPWVHRLDFEKEFGEPGKSEGMTTRICARRQQLKFNIHAVAQMAL DSGLGQCHFSQAILGQGVSGSSPRRVTGVSQ* back to topspliced messenger RNA >Ggra5585.t1 ID=Ggra5585.t1|Name=Ggra5585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2646bp|location=Sequence derived from alignment at tig00000842_pilon:1036685..1039330- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTTTCAGTACTGTTGTCGGTGCGGATGGGGCACCACCGAACTCTGC CCGGCAATGGCATGTTTCGGAGCTCTCGTCACCAACATCAAGAACTCGAG ACTGGGATTCAATTCCTGTCTGGCAGAAAGAGAAGTCCGCAGAGAGAAAT GTCACAAGGGCAGAAGGAAGGCGACCAGCAATAATTGCCAAACTTCATTC ACCAGAGCTAGACTTAATGCCAGACAAAGGTGGTAGCTCAATTGCTGAGG TAAGATTACCCTGTCGAAGCCTTTCCCGAGACTTAGATGATGTACATCCC AGGAATGTTCCTTTGCGTAGAGCTTTGCATCGGAAATCGCTCTCACAAAG ACTTCTTGGGCTTGCCATGGCACTTTGTATCGCAGTAGGACTGTTAGGGT GCGTAATGAACCGATTGTCTTCGGAGCTAGACAAGATTGAATCGGAATTG GAAAAGAGGAACGAAATTATGTCCGGAGGGGAAGGACTTGAAACACACAT TCTTCCTCAATCATCATTGACAAATCCCTCGGAGAGACGTGCTAGGAGGC TTGCAGCAACAACTAGTGAGGCGGTAAGCAAAAGAAACTTTGGCACACAT GACAATCAAGGCTTTTTGGACACCATGAGGTTCCACATTGGAACAATTGC ACGATTATTGAAGTTTCTCAATTACGGTGATGAATACGGGACAATTGCTG CTCTGGTGAGGACGTTGTATAAGCTTTCAGAAACTAGCATCTTACCCACT ACCAAGGGTACGACCGACAATGCTGAATTTACGACTAATTCTGTGGAACC TGAGAACAAGACACTGCCAAGTTCTTCCAACATAAATTGGGTTCAAGCAG GACAAGCAGTACTTCATAATGACGTTCAAAGAACTGCAATCTCGTTAAAG CCTCTTCAGGATGATTTGACTCCAACAATGGCCTCAACTCATTCCCATCA TATCCCCAAAGCAGCTTGGACGGGATCCATATTTTCGAAAACCGTATCTG GCAATCCCACATCGTATAATCTCTTCTCCTCGACGACGGGTAACACGAAT TCTTTACAAAACCAAGCCTTAATACCGGGACATCATGAGAAAACAAATAC GACGAGATCTGAATCAGTACATATGTCATTGACTCATGTACAGAAAGAAC AAATTCCGTTTTCTCCCGACGCACATACTGACCATCGAACGGATGCTAGC TTTGTACCGGCATCCTACTCAGCCCCCACCCAAGTTCATCTCGTTGAGGG AATTGTTCTTTGGGAGTTGCCGAGGGGCAGATCTTTGTGTCGTGTCTTCA ACGTTGCCAGACTTTCAGATGGTACTTTATTCTTACCGAAATGGATGGAG AAACACAAAGAAATGCTGGCTGCACACTGCGGACTAAAGAATGTAATGCA CGTATTCGGAGGTCAATCGAAAGACGAATTGCTGAAGGGTTATTCTTCGG GAAAGCCTCGTTTTGATGAAACTTTTTCGGACCGGGATCTCTTTACTCCT CATACTCCACGGCACCACATGCCTCACTTCCTGTCAGACATTATTCCACC CCTTGTGGCAACAGAGGTTCTCCTTGGTTCCGGTCGAGAAGTGGTGCCTT TCAAGTGCTTCTCAGCAGAAGGGAAAGGGAGCACCTCTTCGTGCCCAAGT TTGGTTCACGACGTAAAGCCTTTTTTGTTTCTAGATATGGAAACAGTCTC CAGACCTCCAACAAACTGGGTCCCAAGTCTAGCGAGGTTTTTTGCTCATC CGAATATTGGTTTTGAATTGGTCCCAGACCTTGTATTAGACCGCAGTTCG GAGCCGAAAGGACTCAGCAGTCTAACCTTGCTTAGATCAGTGATGCTCAC AAACATCAATCCTTACGAACCCTATGGGCTATTTGGTTCCGACGGCAAGA ATCATGTGTTCACCTACAACGGAATTTCTCGTGAACCGACGTGGACCAGC AATGGGATGTTGAAGCGACCTTGCACAGTTTCGGTTACTGTGCTGACTAG ACAAGGGCATCGAGCTCTTCTTGAACTGGAAGAGCTGCAGAAGGTCATCA AGGCTCGCTTCGTTGAACAAGGGTTGGATCTAGATTTCAGAGTAGTAGAC TTTAAGGACACTTGCTTCGAAGACCAAGTGCGCACAATGCAAGGGACGAA CGTTCTGATAGCGAGCCATGGAGCCGGGAACACCAATCTTGTGTTCATGA GACCCGGGGGCACCGTTATTGAAGTGTTCCCGTTCTCATACAAAGCCGGA CCGTTTGACGGATTCGCAAAGGTATTTGGAATGGAGTACAAAACTGCAAT GTCCGCTCCTGAAACGAATGTTTTCAAGGCCTGTATGCGGAAGAAAGAAA AAAATCCAGCTATCATGAAGGAGGTCTTTGAGAAGTGGGATAAAGCTGTT GAAGAAGACAAAGCAACACCATGGGTTCACCGTCTAGATTTTGAGAAGGA ATTCGGAGAACCTGGGAAGTCCGAGGGAATGACCACAAGAATTTGCGCAA GACGGCAGCAGTTAAAGTTCAATATACATGCTGTGGCTCAGATGGCCCTC GACTCAGGACTAGGCCAGTGCCATTTCTCACAGGCGATCCTCGGGCAGGG TGTGTCAGGATCTTCACCCCGCAGAGTAACTGGAGTATCACAATGA back to topprotein sequence of Ggra5585.t1 >Ggra5585.t1 ID=Ggra5585.t1|Name=Ggra5585.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=882bp
MRFSTVVGADGAPPNSARQWHVSELSSPTSRTRDWDSIPVWQKEKSAERN VTRAEGRRPAIIAKLHSPELDLMPDKGGSSIAEVRLPCRSLSRDLDDVHP RNVPLRRALHRKSLSQRLLGLAMALCIAVGLLGCVMNRLSSELDKIESEL EKRNEIMSGGEGLETHILPQSSLTNPSERRARRLAATTSEAVSKRNFGTH DNQGFLDTMRFHIGTIARLLKFLNYGDEYGTIAALVRTLYKLSETSILPT TKGTTDNAEFTTNSVEPENKTLPSSSNINWVQAGQAVLHNDVQRTAISLK PLQDDLTPTMASTHSHHIPKAAWTGSIFSKTVSGNPTSYNLFSSTTGNTN SLQNQALIPGHHEKTNTTRSESVHMSLTHVQKEQIPFSPDAHTDHRTDAS FVPASYSAPTQVHLVEGIVLWELPRGRSLCRVFNVARLSDGTLFLPKWME KHKEMLAAHCGLKNVMHVFGGQSKDELLKGYSSGKPRFDETFSDRDLFTP HTPRHHMPHFLSDIIPPLVATEVLLGSGREVVPFKCFSAEGKGSTSSCPS LVHDVKPFLFLDMETVSRPPTNWVPSLARFFAHPNIGFELVPDLVLDRSS EPKGLSSLTLLRSVMLTNINPYEPYGLFGSDGKNHVFTYNGISREPTWTS NGMLKRPCTVSVTVLTRQGHRALLELEELQKVIKARFVEQGLDLDFRVVD FKDTCFEDQVRTMQGTNVLIASHGAGNTNLVFMRPGGTVIEVFPFSYKAG PFDGFAKVFGMEYKTAMSAPETNVFKACMRKKEKNPAIMKEVFEKWDKAV EEDKATPWVHRLDFEKEFGEPGKSEGMTTRICARRQQLKFNIHAVAQMAL DSGLGQCHFSQAILGQGVSGSSPRRVTGVSQ* back to topmRNA from alignment at tig00000842_pilon:1036685..1039330- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5585.t1 ID=Ggra5585.t1|Name=Ggra5585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2646bp|location=Sequence derived from alignment at tig00000842_pilon:1036685..1039330- (Gracilaria gracilis GNS1m male) ATGCGTTTCAGTACTGTTGTCGGTGCGGATGGGGCACCACCGAACTCTGC
CCGGCAATGGCATGTTTCGGAGCTCTCGTCACCAACATCAAGAACTCGAG
ACTGGGATTCAATTCCTGTCTGGCAGAAAGAGAAGTCCGCAGAGAGAAAT
GTCACAAGGGCAGAAGGAAGGCGACCAGCAATAATTGCCAAACTTCATTC
ACCAGAGCTAGACTTAATGCCAGACAAAGGTGGTAGCTCAATTGCTGAGG
TAAGATTACCCTGTCGAAGCCTTTCCCGAGACTTAGATGATGTACATCCC
AGGAATGTTCCTTTGCGTAGAGCTTTGCATCGGAAATCGCTCTCACAAAG
ACTTCTTGGGCTTGCCATGGCACTTTGTATCGCAGTAGGACTGTTAGGGT
GCGTAATGAACCGATTGTCTTCGGAGCTAGACAAGATTGAATCGGAATTG
GAAAAGAGGAACGAAATTATGTCCGGAGGGGAAGGACTTGAAACACACAT
TCTTCCTCAATCATCATTGACAAATCCCTCGGAGAGACGTGCTAGGAGGC
TTGCAGCAACAACTAGTGAGGCGGTAAGCAAAAGAAACTTTGGCACACAT
GACAATCAAGGCTTTTTGGACACCATGAGGTTCCACATTGGAACAATTGC
ACGATTATTGAAGTTTCTCAATTACGGTGATGAATACGGGACAATTGCTG
CTCTGGTGAGGACGTTGTATAAGCTTTCAGAAACTAGCATCTTACCCACT
ACCAAGGGTACGACCGACAATGCTGAATTTACGACTAATTCTGTGGAACC
TGAGAACAAGACACTGCCAAGTTCTTCCAACATAAATTGGGTTCAAGCAG
GACAAGCAGTACTTCATAATGACGTTCAAAGAACTGCAATCTCGTTAAAG
CCTCTTCAGGATGATTTGACTCCAACAATGGCCTCAACTCATTCCCATCA
TATCCCCAAAGCAGCTTGGACGGGATCCATATTTTCGAAAACCGTATCTG
GCAATCCCACATCGTATAATCTCTTCTCCTCGACGACGGGTAACACGAAT
TCTTTACAAAACCAAGCCTTAATACCGGGACATCATGAGAAAACAAATAC
GACGAGATCTGAATCAGTACATATGTCATTGACTCATGTACAGAAAGAAC
AAATTCCGTTTTCTCCCGACGCACATACTGACCATCGAACGGATGCTAGC
TTTGTACCGGCATCCTACTCAGCCCCCACCCAAGTTCATCTCGTTGAGGG
AATTGTTCTTTGGGAGTTGCCGAGGGGCAGATCTTTGTGTCGTGTCTTCA
ACGTTGCCAGACTTTCAGATGGTACTTTATTCTTACCGAAATGGATGGAG
AAACACAAAGAAATGCTGGCTGCACACTGCGGACTAAAGAATGTAATGCA
CGTATTCGGAGGTCAATCGAAAGACGAATTGCTGAAGGGTTATTCTTCGG
GAAAGCCTCGTTTTGATGAAACTTTTTCGGACCGGGATCTCTTTACTCCT
CATACTCCACGGCACCACATGCCTCACTTCCTGTCAGACATTATTCCACC
CCTTGTGGCAACAGAGGTTCTCCTTGGTTCCGGTCGAGAAGTGGTGCCTT
TCAAGTGCTTCTCAGCAGAAGGGAAAGGGAGCACCTCTTCGTGCCCAAGT
TTGGTTCACGACGTAAAGCCTTTTTTGTTTCTAGATATGGAAACAGTCTC
CAGACCTCCAACAAACTGGGTCCCAAGTCTAGCGAGGTTTTTTGCTCATC
CGAATATTGGTTTTGAATTGGTCCCAGACCTTGTATTAGACCGCAGTTCG
GAGCCGAAAGGACTCAGCAGTCTAACCTTGCTTAGATCAGTGATGCTCAC
AAACATCAATCCTTACGAACCCTATGGGCTATTTGGTTCCGACGGCAAGA
ATCATGTGTTCACCTACAACGGAATTTCTCGTGAACCGACGTGGACCAGC
AATGGGATGTTGAAGCGACCTTGCACAGTTTCGGTTACTGTGCTGACTAG
ACAAGGGCATCGAGCTCTTCTTGAACTGGAAGAGCTGCAGAAGGTCATCA
AGGCTCGCTTCGTTGAACAAGGGTTGGATCTAGATTTCAGAGTAGTAGAC
TTTAAGGACACTTGCTTCGAAGACCAAGTGCGCACAATGCAAGGGACGAA
CGTTCTGATAGCGAGCCATGGAGCCGGGAACACCAATCTTGTGTTCATGA
GACCCGGGGGCACCGTTATTGAAGTGTTCCCGTTCTCATACAAAGCCGGA
CCGTTTGACGGATTCGCAAAGGTATTTGGAATGGAGTACAAAACTGCAAT
GTCCGCTCCTGAAACGAATGTTTTCAAGGCCTGTATGCGGAAGAAAGAAA
AAAATCCAGCTATCATGAAGGAGGTCTTTGAGAAGTGGGATAAAGCTGTT
GAAGAAGACAAAGCAACACCATGGGTTCACCGTCTAGATTTTGAGAAGGA
ATTCGGAGAACCTGGGAAGTCCGAGGGAATGACCACAAGAATTTGCGCAA
GACGGCAGCAGTTAAAGTTCAATATACATGCTGTGGCTCAGATGGCCCTC
GACTCAGGACTAGGCCAGTGCCATTTCTCACAGGCGATCCTCGGGCAGGG
TGTGTCAGGATCTTCACCCCGCAGAGTAACTGGAGTATCACAATGA back to topCoding sequence (CDS) from alignment at tig00000842_pilon:1036685..1039330- >Ggra5585.t1 ID=Ggra5585.t1|Name=Ggra5585.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2646bp|location=Sequence derived from alignment at tig00000842_pilon:1036685..1039330- (Gracilaria gracilis GNS1m male) ATGCGTTTCAGTACTGTTGTCGGTGCGGATGGGGCACCACCGAACTCTGC CCGGCAATGGCATGTTTCGGAGCTCTCGTCACCAACATCAAGAACTCGAG ACTGGGATTCAATTCCTGTCTGGCAGAAAGAGAAGTCCGCAGAGAGAAAT GTCACAAGGGCAGAAGGAAGGCGACCAGCAATAATTGCCAAACTTCATTC ACCAGAGCTAGACTTAATGCCAGACAAAGGTGGTAGCTCAATTGCTGAGG TAAGATTACCCTGTCGAAGCCTTTCCCGAGACTTAGATGATGTACATCCC AGGAATGTTCCTTTGCGTAGAGCTTTGCATCGGAAATCGCTCTCACAAAG ACTTCTTGGGCTTGCCATGGCACTTTGTATCGCAGTAGGACTGTTAGGGT GCGTAATGAACCGATTGTCTTCGGAGCTAGACAAGATTGAATCGGAATTG GAAAAGAGGAACGAAATTATGTCCGGAGGGGAAGGACTTGAAACACACAT TCTTCCTCAATCATCATTGACAAATCCCTCGGAGAGACGTGCTAGGAGGC TTGCAGCAACAACTAGTGAGGCGGTAAGCAAAAGAAACTTTGGCACACAT GACAATCAAGGCTTTTTGGACACCATGAGGTTCCACATTGGAACAATTGC ACGATTATTGAAGTTTCTCAATTACGGTGATGAATACGGGACAATTGCTG CTCTGGTGAGGACGTTGTATAAGCTTTCAGAAACTAGCATCTTACCCACT ACCAAGGGTACGACCGACAATGCTGAATTTACGACTAATTCTGTGGAACC TGAGAACAAGACACTGCCAAGTTCTTCCAACATAAATTGGGTTCAAGCAG GACAAGCAGTACTTCATAATGACGTTCAAAGAACTGCAATCTCGTTAAAG CCTCTTCAGGATGATTTGACTCCAACAATGGCCTCAACTCATTCCCATCA TATCCCCAAAGCAGCTTGGACGGGATCCATATTTTCGAAAACCGTATCTG GCAATCCCACATCGTATAATCTCTTCTCCTCGACGACGGGTAACACGAAT TCTTTACAAAACCAAGCCTTAATACCGGGACATCATGAGAAAACAAATAC GACGAGATCTGAATCAGTACATATGTCATTGACTCATGTACAGAAAGAAC AAATTCCGTTTTCTCCCGACGCACATACTGACCATCGAACGGATGCTAGC TTTGTACCGGCATCCTACTCAGCCCCCACCCAAGTTCATCTCGTTGAGGG AATTGTTCTTTGGGAGTTGCCGAGGGGCAGATCTTTGTGTCGTGTCTTCA ACGTTGCCAGACTTTCAGATGGTACTTTATTCTTACCGAAATGGATGGAG AAACACAAAGAAATGCTGGCTGCACACTGCGGACTAAAGAATGTAATGCA CGTATTCGGAGGTCAATCGAAAGACGAATTGCTGAAGGGTTATTCTTCGG GAAAGCCTCGTTTTGATGAAACTTTTTCGGACCGGGATCTCTTTACTCCT CATACTCCACGGCACCACATGCCTCACTTCCTGTCAGACATTATTCCACC CCTTGTGGCAACAGAGGTTCTCCTTGGTTCCGGTCGAGAAGTGGTGCCTT TCAAGTGCTTCTCAGCAGAAGGGAAAGGGAGCACCTCTTCGTGCCCAAGT TTGGTTCACGACGTAAAGCCTTTTTTGTTTCTAGATATGGAAACAGTCTC CAGACCTCCAACAAACTGGGTCCCAAGTCTAGCGAGGTTTTTTGCTCATC CGAATATTGGTTTTGAATTGGTCCCAGACCTTGTATTAGACCGCAGTTCG GAGCCGAAAGGACTCAGCAGTCTAACCTTGCTTAGATCAGTGATGCTCAC AAACATCAATCCTTACGAACCCTATGGGCTATTTGGTTCCGACGGCAAGA ATCATGTGTTCACCTACAACGGAATTTCTCGTGAACCGACGTGGACCAGC AATGGGATGTTGAAGCGACCTTGCACAGTTTCGGTTACTGTGCTGACTAG ACAAGGGCATCGAGCTCTTCTTGAACTGGAAGAGCTGCAGAAGGTCATCA AGGCTCGCTTCGTTGAACAAGGGTTGGATCTAGATTTCAGAGTAGTAGAC TTTAAGGACACTTGCTTCGAAGACCAAGTGCGCACAATGCAAGGGACGAA CGTTCTGATAGCGAGCCATGGAGCCGGGAACACCAATCTTGTGTTCATGA GACCCGGGGGCACCGTTATTGAAGTGTTCCCGTTCTCATACAAAGCCGGA CCGTTTGACGGATTCGCAAAGGTATTTGGAATGGAGTACAAAACTGCAAT GTCCGCTCCTGAAACGAATGTTTTCAAGGCCTGTATGCGGAAGAAAGAAA AAAATCCAGCTATCATGAAGGAGGTCTTTGAGAAGTGGGATAAAGCTGTT GAAGAAGACAAAGCAACACCATGGGTTCACCGTCTAGATTTTGAGAAGGA ATTCGGAGAACCTGGGAAGTCCGAGGGAATGACCACAAGAATTTGCGCAA GACGGCAGCAGTTAAAGTTCAATATACATGCTGTGGCTCAGATGGCCCTC GACTCAGGACTAGGCCAGTGCCATTTCTCACAGGCGATCCTCGGGCAGGG TGTGTCAGGATCTTCACCCCGCAGAGTAACTGGAGTATCACAATGA back to top
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