Ggra3327.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3327.t1
Unique NameGgra3327.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length192
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000232_piloncontigtig00000232_pilon:71225..71800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3327Ggra3327Gracilaria gracilis GNS1m malegenetig00000232_pilon 71225..71800 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3327.t1.start1Ggra3327.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000232_pilon 71225..71227 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3327.t1.CDS1Ggra3327.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000232_pilon 71225..71800 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3327.t1.exon1Ggra3327.t1.exon1Gracilaria gracilis GNS1m maleexontig00000232_pilon 71225..71800 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3327.t1.stop1Ggra3327.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000232_pilon 71798..71800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3327.t1Ggra3327.t1Gracilaria gracilis GNS1m malepolypeptidetig00000232_pilon 71225..71800 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3327.t1 ID=Ggra3327.t1|Name=Ggra3327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=192bp
MPTVILAVVTPCSPGYGNGPNGCQPCQPGTFQPAANLEACLQCPEPYATP
RIGATQCDYCWANNTVPNKPQTRCIALNSAEAIVNALEGTYENLLYSGNQ
KNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKESSGGYERGSFIVEAD
SPYHSSGHTSGVINWSEPGDFDIGNYVLGVTGPWNELYTRV*
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spliced messenger RNA

>Ggra3327.t1 ID=Ggra3327.t1|Name=Ggra3327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=576bp|location=Sequence derived from alignment at tig00000232_pilon:71225..71800+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAACCGTGATCCTAGCCGTCGTCACCCCGTGTTCCCCGGGCTACGG
CAACGGACCAAACGGCTGTCAACCGTGCCAACCGGGCACATTCCAGCCCG
CAGCCAACCTGGAAGCATGTCTTCAATGCCCCGAACCGTACGCCACCCCT
CGTATCGGCGCTACACAATGCGATTATTGCTGGGCGAATAACACCGTCCC
CAACAAACCGCAGACGCGTTGCATTGCTCTCAACAGCGCCGAGGCCATTG
TCAACGCGCTTGAGGGTACTTATGAGAACTTGTTATACTCGGGCAATCAG
AAAAACGACTGGCATTACGTGCAAATCACTGCGAAGCCTAACTCAGAAGA
TGAGCTTACTTGGTCCAATCGTGCGGGCGTTCAGTGGACTCTTAAGCTGA
AAGAAAGCAGTGGTGGGTATGAGAGAGGATCGTTCATTGTGGAGGCCGAC
TCGCCGTACCACTCCAGCGGTCATACAAGTGGTGTGATTAACTGGAGTGA
GCCCGGTGACTTTGATATTGGGAACTATGTGTTAGGTGTCACCGGACCCT
GGAATGAACTCTATACGCGTGTGTAA
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protein sequence of Ggra3327.t1

>Ggra3327.t1 ID=Ggra3327.t1|Name=Ggra3327.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=192bp
MPTVILAVVTPCSPGYGNGPNGCQPCQPGTFQPAANLEACLQCPEPYATP
RIGATQCDYCWANNTVPNKPQTRCIALNSAEAIVNALEGTYENLLYSGNQ
KNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKESSGGYERGSFIVEAD
SPYHSSGHTSGVINWSEPGDFDIGNYVLGVTGPWNELYTRV*
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mRNA from alignment at tig00000232_pilon:71225..71800+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3327.t1 ID=Ggra3327.t1|Name=Ggra3327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=576bp|location=Sequence derived from alignment at tig00000232_pilon:71225..71800+ (Gracilaria gracilis GNS1m male)
ATGCCAACCGTGATCCTAGCCGTCGTCACCCCGTGTTCCCCGGGCTACGG
CAACGGACCAAACGGCTGTCAACCGTGCCAACCGGGCACATTCCAGCCCG
CAGCCAACCTGGAAGCATGTCTTCAATGCCCCGAACCGTACGCCACCCCT
CGTATCGGCGCTACACAATGCGATTATTGCTGGGCGAATAACACCGTCCC
CAACAAACCGCAGACGCGTTGCATTGCTCTCAACAGCGCCGAGGCCATTG
TCAACGCGCTTGAGGGTACTTATGAGAACTTGTTATACTCGGGCAATCAG
AAAAACGACTGGCATTACGTGCAAATCACTGCGAAGCCTAACTCAGAAGA
TGAGCTTACTTGGTCCAATCGTGCGGGCGTTCAGTGGACTCTTAAGCTGA
AAGAAAGCAGTGGTGGGTATGAGAGAGGATCGTTCATTGTGGAGGCCGAC
TCGCCGTACCACTCCAGCGGTCATACAAGTGGTGTGATTAACTGGAGTGA
GCCCGGTGACTTTGATATTGGGAACTATGTGTTAGGTGTCACCGGACCCT
GGAATGAACTCTATACGCGTGTGTAA
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Coding sequence (CDS) from alignment at tig00000232_pilon:71225..71800+

>Ggra3327.t1 ID=Ggra3327.t1|Name=Ggra3327.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=576bp|location=Sequence derived from alignment at tig00000232_pilon:71225..71800+ (Gracilaria gracilis GNS1m male)
ATGCCAACCGTGATCCTAGCCGTCGTCACCCCGTGTTCCCCGGGCTACGG
CAACGGACCAAACGGCTGTCAACCGTGCCAACCGGGCACATTCCAGCCCG
CAGCCAACCTGGAAGCATGTCTTCAATGCCCCGAACCGTACGCCACCCCT
CGTATCGGCGCTACACAATGCGATTATTGCTGGGCGAATAACACCGTCCC
CAACAAACCGCAGACGCGTTGCATTGCTCTCAACAGCGCCGAGGCCATTG
TCAACGCGCTTGAGGGTACTTATGAGAACTTGTTATACTCGGGCAATCAG
AAAAACGACTGGCATTACGTGCAAATCACTGCGAAGCCTAACTCAGAAGA
TGAGCTTACTTGGTCCAATCGTGCGGGCGTTCAGTGGACTCTTAAGCTGA
AAGAAAGCAGTGGTGGGTATGAGAGAGGATCGTTCATTGTGGAGGCCGAC
TCGCCGTACCACTCCAGCGGTCATACAAGTGGTGTGATTAACTGGAGTGA
GCCCGGTGACTTTGATATTGGGAACTATGTGTTAGGTGTCACCGGACCCT
GGAATGAACTCTATACGCGTGTGTAA
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