Ggra5983.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5983.t1
Unique NameGgra5983.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length183
Homology
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A2V3J031 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J031_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 2.200e-105
Identity = 151/171 (88.30%), Postives = 160/171 (93.57%), Query Frame = 0
Query:   13 APVPPEPDLQAAEPPERFDDDIPAPAMPTAGASARPKSPVVNGTFE-KGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPKHKKCCIS 182
            AP  P P ++   PPER+D+D+PAPAMPTAGAS RPKSPVV GTFE KGDSDD+EVMVKTEFVWADGA+HDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGA+E+TMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPK KKCCIS
Sbjct:    5 APQTPSPQVEV-PPPERYDEDVPAPAMPTAGASVRPKSPVVYGTFEEKGDSDDDEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGASEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPKPKKCCIS 174          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A1X6NYM0 (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYM0_PORUM)

HSP 1 Score: 205 bits (522), Expect = 3.040e-64
Identity = 99/124 (79.84%), Postives = 108/124 (87.10%), Query Frame = 0
Query:   32 DDIPAPAMPTAGA-SARPKSPVVNGTFEKGDSDDE-EVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPK 153
            +D  A  +PT  A S +PKSPVV+GT+E  +     EVMVKTEFVWADGA+HDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVG +EETMNN+RVIRGPPK
Sbjct:   52 EDAAAVGVPTGDAGSMQPKSPVVHGTYEAAEEXXXXEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGDDEETMNNVRVIRGPPK 175          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A1X6NYD2 (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYD2_PORUM)

HSP 1 Score: 197 bits (502), Expect = 3.930e-62
Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 0
Query:   47 RPKSPVVNGTFEKGDSDDE-EVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPK 153
            +PKS VV+GT+E  +     EVMVKTEFVWADGA+HDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVG +EETMNN+RVIRGPPK
Sbjct:    2 QPKSAVVHGTYEAAEEXXXXEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGDDEETMNNVRVIRGPPK 109          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A7S0ZJP0 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJP0_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 2.360e-60
Identity = 95/126 (75.40%), Postives = 108/126 (85.71%), Query Frame = 0
Query:   28 ERFDDDIPAPAMPTAG-ASARPKSPVVNGTFEKGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPP 152
            E   DD    AM  AG A+  P  PV++GT+++ D ++EEVMVKTEFVWADGA++DVKLSG+WNGWMPVQMYHEGGGMWSVVTPVP GTHEFKFVVDGEW+HSTRHPTVG +EETMNNIRVIRGPP
Sbjct:   98 EMVYDDTADTAMAGAGMAAGGPGVPVMHGTYDRPD-EEEEVMVKTEFVWADGAEYDVKLSGSWNGWMPVQMYHEGGGMWSVVTPVPTGTHEFKFVVDGEWRHSTRHPTVGDDEETMNNIRVIRGPP 222          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A1X6NKY1 (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKY1_PORUM)

HSP 1 Score: 187 bits (474), Expect = 6.440e-58
Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
Query:   58 EKGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPK 153
            E  D  +EEVMVKTEFVWADGA+HDV+LSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEW+HSTRHPTVG +E TMNNIRVIRGPPK
Sbjct:    5 EYADPGEEEVMVKTEFVWADGANHDVRLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWRHSTRHPTVGDDEMTMNNIRVIRGPPK 100          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A5J4Z3V9 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3V9_PORPP)

HSP 1 Score: 189 bits (480), Expect = 1.330e-57
Identity = 85/101 (84.16%), Postives = 97/101 (96.04%), Query Frame = 0
Query:   51 PVVNGTFEKGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGP 151
            PV++GT+E+ D ++EEVMVKTEFVWADGA++DVKLSG+WNGWMPVQMYHEGGGMWSVVTPVP GTHEFKF+VDGEW+HSTRHPTVG +EETMNNIRVIRGP
Sbjct:  101 PVMHGTYERPD-EEEEVMVKTEFVWADGAENDVKLSGSWNGWMPVQMYHEGGGMWSVVTPVPTGTHEFKFIVDGEWRHSTRHPTVGDDEETMNNIRVIRGP 200          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A2V3IVS0 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVS0_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 4.680e-57
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   23 AAEPPERFDDDIPAPAMPTAGASARPKSPVVNGTFEKGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPKH--KKCCI 181
            A  PPE+ +D+      P A  +A    P V+ T+EK   ++EEVMVKTEFVWADGA++DV+LSG+WNGWM +QMYHEGGGMWSVVTPVPAG HEFKFVVDGEW+HSTRHPTVG +E TMNN+R+IRGPP+NK+   R  +  N+ A  + P    K CCI
Sbjct:  133 AQHPPEQVEDET----KPKAKGNA----PFVHNTYEKN-QEEEEVMVKTEFVWADGAENDVQLSGSWNGWMTIQMYHEGGGMWSVVTPVPAGIHEFKFVVDGEWRHSTRHPTVGDDEATMNNVRMIRGPPRNKK---REDDGANRPADDTPPDAVPKGCCI 281          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A7S0BNB0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNB0_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 1.640e-55
Identity = 89/141 (63.12%), Postives = 103/141 (73.05%), Query Frame = 0
Query:   41 TAGASARPKSPVVNGTFE-KGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPKHKKCC 180
            T     RP  P+V G    +    + EV+VKTEFVWADGA+ D KL+G+WNGWMP+QMYHEGGGMWSVVTPVPAGTHEFKF+VDGEWKHSTRHPTVG +EE MNNIRVI+GPP      A + +Q   QA   A   K+CC
Sbjct:   89 TGPVEQRPHIPMVQGEHTVENPLGEGEVLVKTEFVWADGAEKDAKLAGSWNGWMPIQMYHEGGGMWSVVTPVPAGTHEFKFIVDGEWKHSTRHPTVGEDEENMNNIRVIKGPP-----PAYVEQQSAAQAEQGARPRKRCC 224          
BLAST of Ggra5983.t1 vs. uniprot
Match: M2Y269 (AMPK1_CBM domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y269_GALSU)

HSP 1 Score: 149 bits (376), Expect = 1.900e-42
Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 0
Query:   62 SDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPP 152
            +D E+  V+TEFV+ADGA  DV LSG WN W P+QMYHEGGG+WSVVT VP GTHEFKF+VDGEW+HSTRHPTVG +EE+ NN+RV++GPP
Sbjct:   66 TDLEKEGVRTEFVYADGAQEDVLLSGDWNNWTPIQMYHEGGGIWSVVTLVPPGTHEFKFIVDGEWRHSTRHPTVGIDEESKNNVRVVKGPP 156          
BLAST of Ggra5983.t1 vs. uniprot
Match: A0A2V3IYZ1 (Phosphoglucan phosphatase LSF1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYZ1_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 4.970e-38
Identity = 58/84 (69.05%), Postives = 70/84 (83.33%), Query Frame = 0
Query:   69 VKTEFVWADGADHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRGPP 152
            VKTEFV+ADGA  DV+LSG WN W  +QM+HEGGGMWSVVTPVP G HEFKF+VDGEWKHS RHPT+G ++ ++NN+RV+   P
Sbjct:   13 VKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQP 96          
The following BLAST results are available for this feature:
BLAST of Ggra5983.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0312.200e-10588.30SNF1-related protein kinase regulatory subunit bet... [more]
A0A1X6NYM03.040e-6479.84AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A1X6NYD23.930e-6285.19AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A7S0ZJP02.360e-6075.40Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NKY16.440e-5888.54AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A5J4Z3V91.330e-5784.16SNF1-related protein kinase regulatory subunit bet... [more]
A0A2V3IVS04.680e-5760.87SNF1-related protein kinase regulatory subunit bet... [more]
A0A7S0BNB01.640e-5563.12Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y2691.900e-4271.43AMPK1_CBM domain-containing protein n=1 Tax=Galdie... [more]
A0A2V3IYZ14.970e-3869.05Phosphoglucan phosphatase LSF1, chloroplastic n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 60..148
e-value: 3.5E-20
score: 73.7
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 70..149
e-value: 3.3E-17
score: 62.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 18..145
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 70..148
e-value: 9.19375E-22
score: 82.2616
IPR030077SNF1 protein kinase subunit beta-2/beta-3PANTHERPTHR10343:SF84ALICORN, ISOFORM Acoord: 18..145
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 70..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000227_piloncontigtig00000227_pilon:62524..63425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5983.t1Ggra5983.t1Gracilaria gracilis GNS1m malemRNAtig00000227_pilon 62524..63425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5983.t1 ID=Ggra5983.t1|Name=Ggra5983.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=183bp
MEPPAAPMAPPRAPVPPEPDLQAAEPPERFDDDIPAPAMPTAGASARPKS
PVVNGTFEKGDSDDEEVMVKTEFVWADGADHDVKLSGAWNGWMPVQMYHE
GGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEETMNNIRVIRG
PPKNKQNTARLSEQRNKQAGMSAPKHKKCCIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR030077SIP2/GAL83
IPR014756Ig_E-set