Ggra11080.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11080.t1
Unique NameGgra11080.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length349
Homology
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A2V3J2W7 (NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2W7_9FLOR)

HSP 1 Score: 442 bits (1136), Expect = 8.460e-152
Identity = 207/322 (64.29%), Postives = 250/322 (77.64%), Query Frame = 0
Query:   27 FRRGPNVRKRRLSFHTANQSRPAVTHMALDPPQDRSKSDDMKRKDIQSYITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSKYVDIPSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSVLFSSAPIQNWGNGEEYGKPGMFNATLFNNNPRRKWVDIDDEMDLWDELD 348
            FR+    R+R + F ++      V  ++  P Q     ++ +     +Y+T E+A QA +DA ++AG DV  VA++CA+GFVEA  QCY   D  +VF+VCG G  GL+GV +AIKLKE GYDPAVHFSHPSKYVD  S+  K+DIP+YEFVP+TLE+YFQVIVDA+LGVGFDGGDIH PYWQVFEML+STRRP+ASIDVPSGWDL+TGPRPIDR A TFIKPELLVSLGAPKLCSK+F+G +HF+AG HLPQ YF +  +SVP FPG SH+VL SS+P Q   NGE YGKPG FNATL+  NPRR+WVDIDD+MDLWDELD
Sbjct:   88 FRQHNLCRRRLVRFSSSRTLNLNVRMLSDTPGQQGQGGENAQSNQPNAYVTPEVAQQAMIDAIALAGDDVQRVAELCAIGFVEALTQCYKVSDAPAVFVVCGPGLTGLIGVYTAIKLKEKGYDPAVHFSHPSKYVDKSSIRKKYDIPVYEFVPTTLEFYFQVIVDALLGVGFDGGDIHAPYWQVFEMLISTRRPIASIDVPSGWDLTTGPRPIDRTAATFIKPELLVSLGAPKLCSKMFAGAFHFVAGLHLPQSYFEEKGISVPVFPGDSHTVLLSSSPFQFTENGEAYGKPGQFNATLYTKNPRRQWVDIDDDMDLWDELD 409          
BLAST of Ggra11080.t1 vs. uniprot
Match: R7Q1H5 (YjeF N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1H5_CHOCR)

HSP 1 Score: 349 bits (896), Expect = 4.290e-117
Identity = 165/291 (56.70%), Postives = 216/291 (74.23%), Query Frame = 0
Query:   60 DRSKSDDMKRKDIQSYITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSKYVDIPSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGK-SHSVLFSSAPIQNWG-NGEEYGKPGMFNATLFNNNPRRKWVDIDDEMDLWDELD 348
            D+S       K  Q++I+ E+A QA  DA + +G DV+ +A  CA GF +A  QCY +++I  VFI CGSG NGL+G++ A++L++ GY P V+ +  SK+ +  SVC +  I L++F+PSTLE+Y+ ++VDA+LG GFDGGDI   YW V+EML+STR  + S+DVPSGWDLSTGPR ID  AD+FIKPE+LVSLGAPKL SK+F+GGYHFIAGRHLPQ YF +  +SVP+FPG+ S+ VL SS P +  G NGE YG+PG FNATL+  NP R+WVD+D   DLWDELD
Sbjct:    4 DKSSKQGDNSKPRQTHISPELANQAINDAITYSGGDVVVMARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKKGYAPEVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYYDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLSTGPRKIDVTADSFIKPEVLVSLGAPKLGSKVFAGGYHFIAGRHLPQSYFLEKGISVPAFPGEESNCVLMSSNPFRFEGANGETYGRPGQFNATLYTKNPTREWVDVDKHDDLWDELD 294          
BLAST of Ggra11080.t1 vs. uniprot
Match: R7QM21 (YjeF N-terminal domain-containing protein n=6 Tax=Chondrus crispus TaxID=2769 RepID=R7QM21_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 7.030e-88
Identity = 132/263 (50.19%), Postives = 182/263 (69.20%), Query Frame = 0
Query:   37 RLSFHTANQSRPAVTHMALDPPQDRSKSDDMKRKDIQSYITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSKYVDIPSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSV 299
            R++ H  +Q R     +++    D+S       K  Q++I+ E+A QA  DA + +G DV+ +A  CA GF +A  QCY +++I  VFI CGSG NGL+G++ A++L++ GY PAV+ +  SK+ +  SVC +  I L++F+PSTLE+Y+ ++VDA+LG GFDGGDI   YW V+EML+STR  + S+DVPSGWDLSTGPR ID  AD+FIKPE+LVSL APKL S +F+GGYHFIAGRHLPQ YF   +     FP +S + 
Sbjct:   26 RVAGHRRSQGR-----ISMQMEVDKSSKQRDNSKPRQTHISPELANQAINDAITYSGGDVVVMARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKRGYAPAVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYYDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLSTGPRKIDVTADSFIKPEVLVSLEAPKLGSNVFAGGYHFIAGRHLPQSYFWKRESLFRLFPARSQTA 283          
BLAST of Ggra11080.t1 vs. uniprot
Match: R7QQK3 (YjeF N-terminal domain-containing protein n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QQK3_CHOCR)

HSP 1 Score: 248 bits (634), Expect = 4.470e-78
Identity = 113/201 (56.22%), Postives = 148/201 (73.63%), Query Frame = 0
Query:   99 VADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSKYVDIPSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSV 299
            +A  CA GF +A  QCY +++I  VFI CGSG NGL+G++ A++L++ GY PAV+ +  SK+ +  SVC +  I L++F+PSTLE+Y  ++VDA+LG GFDGGDI   YW V+EML+STR  + S+DVPSGWDL TGPR ID  AD+FIKPE+LVSL APKL S +F+GGYHFIAGRHLPQ YF   +     FP +S + 
Sbjct:    1 MARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKRGYAPAVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYNDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLWTGPRKIDVTADSFIKPEVLVSLEAPKLGSNVFAGGYHFIAGRHLPQSYFWKRESLFRLFPARSQTA 201          
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A7S1TJI5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJI5_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 2.250e-46
Identity = 95/272 (34.93%), Postives = 148/272 (54.41%), Query Frame = 0
Query:  101 DMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSKYVDI---------PSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLV----STRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQY---------FADIDVSVPSFPGKSHSVLFSSAPIQNWGN--GEEYGKPGMFNATLFNNNPRRKWVDIDDEMDLWDELD 348
            D    G V+  + C+  D    VF++CG G  G +G+  A +L + GYD +V+    S               S+  +  I + +F+PST++ +F ++VDA+ G+     +      Q+ EM+V    ++ RPV S+D+P GWD  +GP    R  DTFIKP++LVSLG PKL SK+F+G +H++AGR  P            ++ +D+       K+  ++ ++     +G   GE YG PG F ATLF   P+R WVD++++ DLWDELD
Sbjct:   79 DSSVDGVVDVVIHCFPPDRCFGVFVLCGHGETGKIGMNVARRLADVGYDVSVYHEQSSASSSEGDGENTFTGSSLLRESGIAVLDFIPSTMDAHFDLVVDAVAGIELTENE------QIVEMVVERISNSSRPVLSLDMPVGWDSDSGPTLWARRTDTFIKPDVLVSLGVPKLGSKMFAGMFHYLAGRLSPPSIEDLDQCGIRYSPLDLGSDLDSPKTFRLISTNPFKSGFGKKPGEVYGSPGQFIATLFTKQPKRTWVDVENDDDLWDELD 344          
BLAST of Ggra11080.t1 vs. uniprot
Match: R7QKS2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKS2_CHOCR)

HSP 1 Score: 149 bits (375), Expect = 8.740e-41
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 0
Query:  239 IDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGK-SHSVLFSSAPIQNWG-NGEEYGKPGMFNATLFNNNPRRKWVDIDDEMDLWDELD 348
            I    ++FIKPE+LVSLGAPKL SK+F+GGYHFIAGRHLPQ YF +  +SVP+FPG+ S+ VL SS P +  G NGE YG+PG FNATL+  NP R+WVDID   DLWDELD
Sbjct:   24 IASRCNSFIKPEVLVSLGAPKLGSKVFAGGYHFIAGRHLPQSYFLEKGISVPAFPGEESNCVLMSSNPFRFEGANGETYGRPGQFNATLYTKNPTREWVDIDKHDDLWDELD 135          
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A1Y1MAN0 (NAD(P)H-hydrate epimerase n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MAN0_PHOPY)

HSP 1 Score: 139 bits (349), Expect = 2.150e-35
Identity = 80/236 (33.90%), Postives = 128/236 (54.24%), Query Frame = 0
Query:   75 YITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIH--SVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHF---SHPSKYVDIPSVCSKHDIPLYEFVPSTLEYY-FQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSVLFSSA 304
            Y+T + AI   VD F+   + V  + ++  +    A  QCY  + I+  SV + CG G NG  G+  A  LK   Y+ +V++   +    Y ++   C   DIPL   +P + E   + +IVDA+ G  F    +   +  + E++ +T  PVASID+PSGWD+  G  P     +  +KPELL+SL APKLC+  F+G YH++ GR +P    +  ++S+P +PG    +L +S+
Sbjct:   29 YLTQQEAINVDVDLFNEYKYSVDQLMELAGLSCATAIAQCYKPEKINCKSVLVCCGPGNNGGDGLVCARHLKLFNYNVSVYYPKRTDKDLYNNLTHQCEAMDIPLLSELPISNEINKYGLIVDALFGFSFKP-PVRAAFVPIIELMKTTTVPVASIDIPSGWDVENGEPP-----EGGVKPELLISLTAPKLCANKFNGKYHYLGGRFVPPSLESKYNLSLPKYPGTECCILLNSS 258          
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A137P1L7 (YjeF N-terminal domain-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P1L7_CONC2)

HSP 1 Score: 135 bits (340), Expect = 1.220e-34
Identity = 68/204 (33.33%), Postives = 115/204 (56.37%), Query Frame = 0
Query:  109 EAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSK---YVDIPSVCSKHDIPLYEFVP-STLEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSVLFSSAPIQN 308
            ++    +N  ++  V IVCG G NG  G+  A  LK  GY P + +  PS    + ++ + C   DIP+   V  S ++  +++IVDA+ G  F G  I PP+     +L +T+ PV SIDVPSGW +   P+  D   + +  P +L+SL APKLC+K F+G YH++ GR +P++    +++++P + G    V+  ++ + +
Sbjct:    9 QSIYSAFNNKNLKKVAIVCGPGNNGGDGLVCARHLKHFGYSPTIIYPKPSTKDLFKNLITQCKGLDIPVKNEVEVSEVDKEYELIVDAIFGFSFSG-QIRPPFGPYINLLKTTKLPVVSIDVPSGWSIDEEPKESD---ENYFMPTMLISLTAPKLCAKYFNGAYHYLGGRFIPKEMADQLELNLPDYKGIDQFVILKNSDLDS 208          
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A2P2HYV2 (NAD(P)H-hydrate epimerase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2HYV2_9CRUS)

HSP 1 Score: 134 bits (338), Expect = 1.180e-33
Identity = 84/236 (35.59%), Postives = 127/236 (53.81%), Query Frame = 0
Query:   76 ITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHFSHPSK---YVDIPSVCSKHDIPLYEFVPST--LEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSVLFSSAPI 306
            +T + A+    + FS     V  + ++  +    A  + Y A     VF+ CG G NG  G+  A  LK  G+ P+V++   +    + ++   C  +DI + E +PS   L+  F VIVDA+ G  F    +   +  V E L  T+ PV S+D+PSGWD+ +GP P D  A   I+P++LVSL APKLC+K F+G YH + GR +P Q     D+ +PS+P +   VL S AP+
Sbjct:   33 LTQKEAMAVDEELFSSYQFSVDQLMELAGLSCAHAVAKFYPALSHTRVFVACGPGNNGGDGLVCARHLKLMGHQPSVYYPKRTDRPLFHNLVRQCQMYDIDVKEDMPSLHQLDEEFDVIVDALFGFSFKP-PVRAAFVPVIEALSKTKLPVVSVDIPSGWDVESGP-PSDPPA---IQPDMLVSLTAPKLCAKHFTGRYHVLGGRFVPPQLEQKYDLRLPSYPSQQQIVLLS-APV 262          
BLAST of Ggra11080.t1 vs. uniprot
Match: A0A1B6FG01 (NAD(P)H-hydrate epimerase n=4 Tax=Proconiini TaxID=565685 RepID=A0A1B6FG01_9HEMI)

HSP 1 Score: 131 bits (329), Expect = 3.290e-32
Identity = 76/229 (33.19%), Postives = 119/229 (51.97%), Query Frame = 0
Query:   75 YITAEIAIQAQVDAFSMAGHDVLAVADMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDPAVHF---SHPSKYVDIPSVCSKHDIPLYEFVPST--LEYYFQVIVDAMLGVGFDGGDIHPPYWQVFEMLVSTRRPVA----SIDVPSGWDLSTGPRPIDRAADTFIKPELLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPG 294
            Y+  E AI   ++ F+     V  + ++  +    A   CY +    +V I CG G NG  G+  A  LK  G+DPAV++   +    Y ++   C+  DIP  + +P+   ++  + ++VDA+ G  F      PP    FE L+ T   ++    SID+PSGW + TGP P +      +KPELL+SL APK C+K F G YH++ GR +P +     D+ +P +PG
Sbjct:   58 YLNQEEAINVDLELFNEYKFSVDQLMELAGLSCATAIFHCYKSKPRKNVLICCGPGNNGGDGLVCARHLKLFGFDPAVYYPKRTDKELYHNLTLQCTNMDIPFLDILPNENDIDTNYDIVVDAVFGFSF-----RPPVRPEFEKLLDTLNKLSVSLCSIDIPSGWHVETGP-PANG-----LKPELLISLTAPKKCAKFFKGKYHYLGGRFVPPKLGKKYDLRLPEYPG 275          
The following BLAST results are available for this feature:
BLAST of Ggra11080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2W78.460e-15264.29NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis c... [more]
R7Q1H54.290e-11756.70YjeF N-terminal domain-containing protein n=1 Tax=... [more]
R7QM217.030e-8850.19YjeF N-terminal domain-containing protein n=6 Tax=... [more]
R7QQK34.470e-7856.22YjeF N-terminal domain-containing protein n=4 Tax=... [more]
A0A7S1TJI52.250e-4634.93Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R7QKS28.740e-4165.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1Y1MAN02.150e-3533.90NAD(P)H-hydrate epimerase n=1 Tax=Photinus pyralis... [more]
A0A137P1L71.220e-3433.33YjeF N-terminal domain-like protein (Fragment) n=1... [more]
A0A2P2HYV21.180e-3335.59NAD(P)H-hydrate epimerase (Fragment) n=1 Tax=Hiron... [more]
A0A1B6FG013.290e-3233.19NAD(P)H-hydrate epimerase n=4 Tax=Proconiini TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036652YjeF N-terminal domain superfamilyGENE3D3.40.50.10260coord: 73..300
e-value: 1.1E-32
score: 115.1
IPR036652YjeF N-terminal domain superfamilySUPERFAMILY64153YjeF N-terminal domain-likecoord: 75..294
IPR004443YjeF N-terminal domainPFAMPF03853YjeF_Ncoord: 100..261
e-value: 3.7E-19
score: 69.3
IPR004443YjeF N-terminal domainPROSITEPS51385YJEF_Ncoord: 83..293
score: 25.910789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..68
NoneNo IPR availablePANTHERPTHR13232:SF12YJEF N-TERMINAL DOMAIN-CONTAINING PROTEIN 3coord: 58..296
IPR032976YjeF N-terminal domain-containing protein NAXE-likePANTHERPTHR13232NAD(P)H-HYDRATE EPIMERASEcoord: 58..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:64749..65795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11080.t1Ggra11080.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 64749..65795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11080.t1 ID=Ggra11080.t1|Name=Ggra11080.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=349bp
MWYRQPIHAAFVSAHHLSGRRKNLECFRRGPNVRKRRLSFHTANQSRPAV
THMALDPPQDRSKSDDMKRKDIQSYITAEIAIQAQVDAFSMAGHDVLAVA
DMCAVGFVEAFMQCYNADDIHSVFIVCGSGFNGLVGVKSAIKLKEHGYDP
AVHFSHPSKYVDIPSVCSKHDIPLYEFVPSTLEYYFQVIVDAMLGVGFDG
GDIHPPYWQVFEMLVSTRRPVASIDVPSGWDLSTGPRPIDRAADTFIKPE
LLVSLGAPKLCSKIFSGGYHFIAGRHLPQQYFADIDVSVPSFPGKSHSVL
FSSAPIQNWGNGEEYGKPGMFNATLFNNNPRRKWVDIDDEMDLWDELD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036652YjeF_N_dom_sf
IPR004443YjeF_N_dom
IPR032976YJEFN_prot_NAXE-like