Ggra731.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra731.t1
Unique NameGgra731.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length638
Homology
BLAST of Ggra731.t1 vs. uniprot
Match: A0A2V3IPE9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE9_9FLOR)

HSP 1 Score: 708 bits (1827), Expect = 1.090e-248
Identity = 351/623 (56.34%), Postives = 446/623 (71.59%), Query Frame = 0
Query:   20 LIVREVTSLEIANYSYLDHPLYTNNVYNETRPKPVVMKRYYRMAGSGHSTLGMLFAPQSALYNRYPSMESFSSGPLDSLFITGSRSNSNGTYVEVHLNYRSRVFLLLNAGGLRAKDLQQLESVEGLSSIWTGLFALRSASKKGIIVGDPERTGRKFTLPSHAAVVETIVEDGVPILLPHPGSIKVNGVPCTRMTLLFANATE--NGSIEAFEYPGAPATVWSPFNGDVVDAVAVKANKKCPDWLHDLHVTETRDKAVAEEMEEPMVWRTWHSPIDSIYWCYHDHEHGSYPGEYRPMFGYTAWKTADSSTTHGRQDESHEGFKTFSFVLEEQKLVVVLVIHMHLSRGRRFVTRHHTSILAVMNESWELLIEFHMKQDFGAALATLRKGKTVAIDMHEEEILEELKMFGKRSGRRFNVLRLDENFPDSVDKRFKLNKKNEITKDDRNKVSRGIYEAWNGALNTCSWSEKRFRGGGKDGGITFDTRNPATALIDTEQTPRHEAVQQLRGNSMNRFIKINSDVEIGPRHCWFDIFSSETGI---DVEKTGGVFYTDAYFRGVKKSAGRFYPRQYLKMTSILDVVSLKSGKLLVADGWNGHYSYNSGSSTAGGRRFANTEGAVRAEVN 637
            L +R V +LEI  Y+Y DHPLYT + YNETRP PVVM +YYR       T+ MLFAP SA Y R P++E  S+ PLD+L+I GS  +S   +VEVHLNY +RVF+LLN  GL  K+L  L SV+GLSS W+GLFA+RS     I VGD +R GR+  LPS AAVVE++VE    + +PHPGSI+VNG+ C+RMTLLFA      NGS+ AFEYPG P  V SP +G+ V+ V V  N++CP+WLHDLHVTETRD  VA  + EP+VWR+WHS IDS+YWCY+DHEHGSYPG+YR MFGYTAWKTADSST+ GRQDESHEGFKTF   L  +K +VV+ +HMHLSRGRRFVTRHHTS++AV+NE+WE+L+E HMKQDFGAAL TL  G+T+ ID HE  IL+EL+  GKRSGRRFNVL++D+ FP SVD RF LN +  +++  +  +  GIYE WN  LNTCSWS++R+ GGG+D G++FD R+ ATA+ D  +  R ++VQ+L G SM+RF+++  DVEIG  HC  DI    +GI   ++   GGVFYTD+Y R V   AG F  RQ+++     + V ++ G+  V D W G Y+  +  S  GGRR  N E AV  E+N
Sbjct:    6 LFLRHVLALEIPTYTYRDHPLYTRSEYNETRPNPVVMNKYYRYRNKDKLTVSMLFAPNSASYGRLPTLEPLSTTPLDALYIPGSGVDSTEPFVEVHLNYAARVFMLLNGRGLHGKELTNLHSVQGLSSNWSGLFAIRSTHGGRISVGDAQRLGRELFLPSQAAVVESVVEKDAVLTVPHPGSIRVNGLNCSRMTLLFAQVEGEVNGSVRAFEYPGVPEKVVSPMSGEEVETVEVVPNQRCPEWLHDLHVTETRDAEVARAVGEPLVWRSWHSAIDSVYWCYYDHEHGSYPGQYRAMFGYTAWKTADSSTSDGRQDESHEGFKTFVLGLAHEKRIVVVTLHMHLSRGRRFVTRHHTSVVAVVNENWEVLMELHMKQDFGAALVTLWDGRTIGIDKHERMILQELQRRGKRSGRRFNVLKIDDGFPHSVDTRFALNSRT-VSEATKGGLLHGIYERWNAQLNTCSWSKRRYVGGGRDEGMSFDVRDAATAIRDVNEVGRDKSVQKLWGASMDRFVRVMGDVEIGVSHCCLDILHGGSGIAQVNLRANGGVFYTDSYLRRVGSGAGGFAVRQFVR--DGFEGVVIRGGRYFVTDAWYGAYALTN-DSRIGGRRVMNAERAVLGELN 624          
BLAST of Ggra731.t1 vs. uniprot
Match: A0A2V3IK45 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK45_9FLOR)

HSP 1 Score: 559 bits (1441), Expect = 2.410e-190
Identity = 296/612 (48.37%), Postives = 381/612 (62.25%), Query Frame = 0
Query:   27 SLEIANYSYLDHPLYTNNVYNETRPKPVVMKRYY-RMAGSGHSTLGMLFAPQSALYNRYPSMESFSSGPLDSLFITGSRSNSNGTYVEVHLNYRSRVFLLLNAGGLRAKDLQQLESVEGLSSIWTGLFALRSASKKGIIVGDPERTGRKFTLPSHAAVVETIVEDGVPILLPHPGSIKVNGVPCTRMTLLFANATENGSIEAFEYPGAPATVWSPFNGDVVDAVAVKANKKCPDWLHDLHVTETRDKAVAEEMEEPMVWRTWHSPIDSIYWCYHDHEHGSYPGEYRPMFGYTAWKTADSSTTHGRQDESHEGFKTFSFVLEEQKLVVVLVIHMHLSRGRRFVTRHHTSILAVMNESWELLIEFHMKQDFGAALATLRKGKTVAIDMHEEEILEELKMFGKRSGRRFNVLRLDENFPDSVDKRFKLNKKNEITKDDRNKVSRGIYEAWNGALNTCSWSEKRFRGGGKDGGITFDTRNPATALIDTEQTPRHEAVQQLRGNSMNRFIKINSDVEIGPRHCWFDIFSSETGIDVEKTGGVFYTDAYFRGVKKSAGRFYPRQYLKMTSILDVVSLKSGKLLVADGWNGHYSYNSGSSTAGGRRFANTEGAVRAEVN 637
            SLE   YSY DHP YT+  ++E RP PVVM +YY     +G  T  +LFAP+SA YN +PS + F S  LD+LFI G+ + S  T+VEVH+N R+RVFL+LN  GL    ++ L S+ GLS+ W  L  +RSAS   I +GD  R GR F+LP H A+VE IVE   P+LLPHPGS+ VN V C R TLLFA   E   I AFE P  P  V S   G++V    V  N KCP+WLHD+HVT +RD +VA    E + WRTWH PID ++WCY+DHEHGS+PG++ PMFGYTAWKT D++T H RQDESH GFKT+SF +  +   VV+V+HMHLS  RRF  RHHT    V++++W + +E HMK DFGAA+ TL+ G    I   + +I EEL   G  + RRFN+L  DEN+P+SVD RF+LN     T+ ++  V RGIYE W G LNTCS S  R      + G  FD RNP+TAL     T   E  Q+L GN +NRF+K+ + +E G  HC F      +  +   + GVFYTD YF  V++  G    RQY+K       ++L +G +L  D W  H +Y    +  GGRRF N E +V A VN
Sbjct:   21 SLEFPTYSYRDHPFYTSPEHDEARPSPVVMHKYYTHNPKAGKVTGNLLFAPRSATYNSFPSKQPFGS-KLDALFIPGTSNESKSTFVEVHVNRRTRVFLVLNGKGLSLNAMKNLASITGLSAEWRNLRGIRSASGSRIPIGDKARLGRIFSLPRHGAIVERIVEPDEPLLLPHPGSVSVNNVKCRRFTLLFAKPEEGNPI-AFESPHVPEHVHSHIRGEIVKTTPVFPNMKCPNWLHDMHVTSSRDSSVARTHGEQVHWRTWHPPIDPVFWCYYDHEHGSFPGKHWPMFGYTAWKTFDNTTVHKRQDESHNGFKTYSFPVPGRSRYVVIVVHMHLSFARRFTARHHTVSFTVLDKNWNVEMELHMKMDFGAAVVTLKDGGDEPISDRDVDIQEELGSRGVLANRRFNILNEDENYPESVDPRFRLNCGRTATEANKRAVLRGIYEQWRGPLNTCSKSNGRI-----NRGFNFDVRNPSTALRFLNDTS-DENTQKLSGNGVNRFLKVRNGLEFGVDHCHF----GNSSTNFMTSDGVFYTDPYFSVVEEGPGTNSVRQYIKPG--FKPLNLDAGVMLPIDAWYSHMTYVPRKTKPGGRRFMNMERSVFAAVN 618          
BLAST of Ggra731.t1 vs. uniprot
Match: A0A7S1V1L8 (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V1L8_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.450e-49
Identity = 131/394 (33.25%), Postives = 191/394 (48.48%), Query Frame = 0
Query:   33 YSYLDHPLYTNNVYN-ETRPKPVVMKRYYRMAGS---GHSTLGMLFAPQSALYNRYPSMESFSSGPLDSLFITGSR--SNSNGTYVEVHLNYRSRVFLLLNA-----GGLRAKDLQQLESVEGLSSIWTGLFALRSASKKGIIVGDPERTGR--KFTLP---SHAAVVETIVEDGVPILLPHPGSIKVNGVPCTRMTLLFANATENGSIEAFEYPGAPATVW-SPFNGDVVDAVAVKA------NKKCPDWLHDLHVTETRDKAVAEEMEEPMVWRTWHSPIDSIYWCYHDHEHGSYPGEYRPMFGYTAWKTADSSTTHGRQDESHEGFKTFSFVLEEQKLVVVLVIHMHLSRGRRFVTRHHTSILAVMNE----SWELLIEFHMKQDFGAALA 399
            YSY  HP  T+N+      P PV+M  Y+  +G+     ++ G +FAP SA Y    S + F     D L+   +R   ++ G +  + L   + V++LL        G     +   ++   + S WT + A+   ++    +GD +R  +  ++ +P    +A  VE  +     +LL HP   +VNG       ++ A          F   G PA +    FN  +       A      N+ CP WLHD ++ + RD A          W TWH PID +YWCY DHEHG YPG Y P F +TA+ T D S+  GRQ ESH GFK   FV ++ + VVV+V+H H S+ RRF  RHHT + +V       SW++ +E HMK DFGA  A
Sbjct:   64 YSYTHHP--THNLRRVRDYPTPVIMDSYFFRSGTCCDRFNSEGGMFAPASATYKFQDSADYFCVDA-DVLYTPATRRSGHNEGHFATIKLTRPAVVYVLLTVDDPFPAGTTDFTITSSDADVAVPSDWTAIAAVEHETQADFEIGDVDRWTQTDEYVVPFLKRNAVAVEVTLSPENELLLAHPTVFRVNGERVRNALVVMAEQA------TFPLVGHPAPILPGNFNSYLTGETVRPADDPPFPNQSCPSWLHDTYIVK-RDGAK---------WATWHPPIDPVYWCYFDHEHGGYPGLYFPRFHFTAYHTPDPSSPDGRQQESHNGFKVIPFVADDGR-VVVMVLHAHNSQARRFHARHHTFVFSVHKANDDGSWDMEMELHMKADFGALRA 437          
BLAST of Ggra731.t1 vs. uniprot
Match: A0A7S2YDC5 (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDC5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.340e-23
Identity = 87/275 (31.64%), Postives = 133/275 (48.36%), Query Frame = 0
Query:  298 YHDHEHGSYPGEYRPMFGYTAWKTADSSTT-------HGRQDESHEGFKTFSFVLEEQKLVVVLVIHMHLSRGRRFVTRHHTSILAVMNES---WELLIEFHMKQDFGAALATLRKGKTVAIDMHEEEILEELKMF--GKRSGRRFNVLRLDENFPDSVDKRFKLNKKNEITKDDRNKVSRGIYEAW----NGALNTCSWSEKRFRGGGKDGGITFDTRNPATALIDTEQTPRHEAVQQLRGNS-MNRFIKINSD---------VEIGPRHCWFD 546
            Y++HEHG YPG+Y+P F YTA+ T D+ST         GRQ ESH+GFK   F+ E+ +  V LV+H H S  RRF+ RHHT ++AV + +   W L +  HMK DFG     +R          +++I ++L+ +  G+++ R   V      FPD+          ++  +++      G YE W    N A+N   W            G+ F+  N ATA+ D       + +Q L GN+ M+R +   +          +EI   +C FD
Sbjct:    1 YYEHEHGGYPGQYKPKFHYTAFHTPDASTGVVGDTTWSGRQAESHQGFKVIPFLAEDGR-AVSLVLHAHNSNPRRFLARHHTLMIAVHDMTTPQWTLQLLLHMKADFGP----MRAISYGIFREEQQDIADDLESYTGGQKAERDIYVFD-PAKFPDNDGFWMSGQSVDKTPEENLAAAYNGRYEEWRCPINCAVNPSPWYNS---------GLKFEFHNQATAMKDGYGPATLDNMQVLTGNAAMHRSVVFVAGGPSGYTHQLIEINRDNCAFD 260          
BLAST of Ggra731.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI00035DC839 (hypothetical protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI00035DC839)

HSP 1 Score: 74.3 bits (181), Expect = 3.270e-10
Identity = 52/162 (32.10%), Postives = 69/162 (42.59%), Query Frame = 0
Query:  252 KANKKCPDWLHDLHVTETRDKAVAEEMEEPMVWRT-WHSPIDSIYWCYHDHEHGSYP------------GEYRPMFGYTAWK---TADSSTTHGRQDESHEGFKTFSFVLEEQKLVVVLVIHMHLSRGRRFVTRHHTSILAVMNESWELLIEFHMKQDFGAA 397
            + N+KCP W+HD +     D            WR  WH PIDS YWCY DHEHGS P                  +GY A K   TA  ++ H   +E  EG K +SF  E    +V    H   +     V  HHT  + + +    LL + H+  + G A
Sbjct:  215 RPNQKCPAWVHDSYNVRDPDGG----------WRHGWHPPIDSTYWCYFDHEHGSKPLPEIEKLIKEAASALNQGYGYVADKANKTAFCTSCHQPLEEYREGNKNYSFYWEGNAWMVNF--HQATAHDNIAVNEHHTWGVTIADAGSRLLADVHLMANTGYA 364          
The following BLAST results are available for this feature:
BLAST of Ggra731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IPE91.090e-24856.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK452.410e-19048.37Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A7S1V1L82.450e-4933.25Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2YDC51.340e-2331.64Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
hypothetical protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI00035DC8393.270e-1032.10hypothetical protein n=1 Tax=Calidithermus timidus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..637
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000204_piloncontigtig00000204_pilon:37919..39832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra731.t1Ggra731.t1Gracilaria gracilis GNS1m malemRNAtig00000204_pilon 37919..39832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra731.t1 ID=Ggra731.t1|Name=Ggra731.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=638bp
MVVRRTIPVWLVFGLGLCLLIVREVTSLEIANYSYLDHPLYTNNVYNETR
PKPVVMKRYYRMAGSGHSTLGMLFAPQSALYNRYPSMESFSSGPLDSLFI
TGSRSNSNGTYVEVHLNYRSRVFLLLNAGGLRAKDLQQLESVEGLSSIWT
GLFALRSASKKGIIVGDPERTGRKFTLPSHAAVVETIVEDGVPILLPHPG
SIKVNGVPCTRMTLLFANATENGSIEAFEYPGAPATVWSPFNGDVVDAVA
VKANKKCPDWLHDLHVTETRDKAVAEEMEEPMVWRTWHSPIDSIYWCYHD
HEHGSYPGEYRPMFGYTAWKTADSSTTHGRQDESHEGFKTFSFVLEEQKL
VVVLVIHMHLSRGRRFVTRHHTSILAVMNESWELLIEFHMKQDFGAALAT
LRKGKTVAIDMHEEEILEELKMFGKRSGRRFNVLRLDENFPDSVDKRFKL
NKKNEITKDDRNKVSRGIYEAWNGALNTCSWSEKRFRGGGKDGGITFDTR
NPATALIDTEQTPRHEAVQQLRGNSMNRFIKINSDVEIGPRHCWFDIFSS
ETGIDVEKTGGVFYTDAYFRGVKKSAGRFYPRQYLKMTSILDVVSLKSGK
LLVADGWNGHYSYNSGSSTAGGRRFANTEGAVRAEVN*
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