Ggra591.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra591.t1
Unique NameGgra591.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length545
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:27685..29406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra591Ggra591Gracilaria gracilis GNS1m malegenetig00000203_pilon 27685..29406 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1Ggra591.t1Gracilaria gracilis GNS1m malepolypeptidetig00000203_pilon 27685..29406 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1.stop1Ggra591.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000203_pilon 27685..27687 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1.CDS1Ggra591.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000203_pilon 27685..28446 -
Ggra591.t1.CDS2Ggra591.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000203_pilon 28534..29406 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1.exon1Ggra591.t1.exon1Gracilaria gracilis GNS1m maleexontig00000203_pilon 27685..28446 -
Ggra591.t1.exon2Ggra591.t1.exon2Gracilaria gracilis GNS1m maleexontig00000203_pilon 28534..29406 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1.intron1Ggra591.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000203_pilon 28447..28533 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra591.t1.start1Ggra591.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000203_pilon 29404..29406 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra591.t1 ID=Ggra591.t1|Name=Ggra591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=545bp
LYDTALTDKFIELEISIPPYATGEKKSRALRLVRLIWFGNEYQHERAVVE
FIVHNRITPDPNRPISLSGLSLAPTQYGAVTQTSPINGHPVLHTPHHAQQ
HSIPTSITPQEYAVQQAVQRLTFEDNVNTHGPVSPAASNIYEHVHNLPCV
PPSNQTANRLQRNSVDYRMPNAARPPAHHRTPAHAPPNHSVPVPSHHPSQ
NQSTHGHHATQSANRSPADRQSKLAVAFSTAYKDASNRYSSTIDDSWPEK
KEIFEDIAQNYICSKSEALGFLNNLFTGGARTIFRQHVKGKALTFEEFTS
HDASLNDAFAKLTTKIEELFPRIPFQRQDDYQKRLILSKTVKHQPWATAT
LDRTTAELPTFTALSGALAHVLQKNVARTSNNPVQTNPANGAFYTNPRFG
RYSNRGQHHRQARSSDSPSSKEHRRPHHNSYHNDYRRNNYNSQRQPRQMY
RIRRHFNHSRGTRGAYYVLQDDLEPITDNTEDVPSDHEDHDDGTDPTEPN
TQDSPPDQNEDSTDTTPTYFIQTATDSANFHATMQHPDFSDQPF*
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spliced messenger RNA

>Ggra591.t1 ID=Ggra591.t1|Name=Ggra591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1635bp|location=Sequence derived from alignment at tig00000203_pilon:27685..29406- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
TTGTACGACACAGCACTAACCGATAAGTTCATTGAGCTCGAAATTTCCAT
CCCGCCGTACGCCACTGGAGAGAAGAAATCTCGAGCCCTACGACTGGTTC
GACTTATATGGTTTGGCAATGAATACCAACATGAACGTGCAGTTGTCGAA
TTCATCGTACACAACCGCATCACCCCGGACCCAAATCGCCCCATCAGTCT
TTCTGGTTTATCGTTAGCGCCTACACAGTATGGTGCAGTGACGCAAACGT
CACCCATCAATGGTCATCCCGTTTTGCATACCCCCCACCATGCACAACAG
CATTCCATTCCCACCTCCATAACACCTCAAGAGTACGCCGTTCAACAGGC
AGTCCAACGTTTGACCTTTGAAGACAACGTGAATACCCATGGCCCTGTCT
CGCCTGCTGCGTCTAACATCTACGAACACGTGCATAACCTCCCCTGTGTC
CCTCCATCAAATCAAACTGCTAACCGATTGCAACGCAACAGCGTTGATTA
TCGTATGCCGAATGCAGCCCGCCCCCCTGCCCACCATCGAACACCAGCCC
ATGCTCCTCCGAACCATTCAGTGCCAGTTCCCTCTCATCACCCATCACAA
AATCAGAGTACACATGGTCACCATGCCACACAGTCCGCTAACCGAAGCCC
TGCAGACCGTCAATCCAAACTGGCTGTTGCCTTCTCCACCGCATACAAAG
ATGCGTCCAATCGCTACAGTAGCACTATCGACGATTCATGGCCAGAAAAG
AAGGAAATCTTCGAAGATATCGCACAGAACTACATATGCAGCAAATCCGA
AGCCTTAGGTTTCTTGAACAACCTATTCACTGGTGGAGCTCGCACAATTT
TCCGCCAACATGTCAAGGGTAAAGCTCTAACGTTCGAAGAGTTCACAAGC
CATGACGCCTCCCTCAATGACGCCTTCGCCAAACTCACGACTAAGATCGA
AGAACTGTTTCCCCGTATTCCCTTTCAGCGTCAAGACGACTATCAAAAGA
GGCTCATACTTTCGAAGACAGTGAAACACCAACCTTGGGCAACCGCAACT
CTTGATCGTACTACGGCAGAACTACCGACCTTCACCGCCCTTTCAGGTGC
TCTGGCGCATGTCCTTCAGAAAAATGTTGCTCGTACTTCGAACAACCCGG
TGCAGACCAACCCGGCCAACGGAGCCTTCTACACGAACCCCCGCTTCGGT
CGCTATTCTAACCGTGGCCAGCATCACCGCCAGGCACGTAGTTCGGACTC
ACCCAGTTCCAAGGAACACCGACGCCCGCACCACAATTCCTACCACAATG
ATTACCGTCGTAACAATTACAACTCTCAGCGACAACCCCGTCAGATGTAC
CGTATTCGTCGCCATTTCAACCACTCCCGTGGAACACGCGGCGCGTACTA
CGTCCTCCAGGATGATCTGGAACCAATCACAGACAACACCGAAGACGTCC
CCTCCGACCATGAAGATCACGATGATGGCACAGACCCTACCGAACCCAAC
ACGCAAGACAGTCCGCCCGACCAAAACGAAGATAGCACCGACACGACCCC
TACCTACTTCATACAAACAGCCACTGACTCTGCAAATTTCCATGCCACCA
TGCAACATCCAGACTTCTCCGATCAGCCTTTTTAG
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protein sequence of Ggra591.t1

>Ggra591.t1 ID=Ggra591.t1|Name=Ggra591.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=545bp
LYDTALTDKFIELEISIPPYATGEKKSRALRLVRLIWFGNEYQHERAVVE
FIVHNRITPDPNRPISLSGLSLAPTQYGAVTQTSPINGHPVLHTPHHAQQ
HSIPTSITPQEYAVQQAVQRLTFEDNVNTHGPVSPAASNIYEHVHNLPCV
PPSNQTANRLQRNSVDYRMPNAARPPAHHRTPAHAPPNHSVPVPSHHPSQ
NQSTHGHHATQSANRSPADRQSKLAVAFSTAYKDASNRYSSTIDDSWPEK
KEIFEDIAQNYICSKSEALGFLNNLFTGGARTIFRQHVKGKALTFEEFTS
HDASLNDAFAKLTTKIEELFPRIPFQRQDDYQKRLILSKTVKHQPWATAT
LDRTTAELPTFTALSGALAHVLQKNVARTSNNPVQTNPANGAFYTNPRFG
RYSNRGQHHRQARSSDSPSSKEHRRPHHNSYHNDYRRNNYNSQRQPRQMY
RIRRHFNHSRGTRGAYYVLQDDLEPITDNTEDVPSDHEDHDDGTDPTEPN
TQDSPPDQNEDSTDTTPTYFIQTATDSANFHATMQHPDFSDQPF*
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mRNA from alignment at tig00000203_pilon:27685..29406-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra591.t1 ID=Ggra591.t1|Name=Ggra591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1722bp|location=Sequence derived from alignment at tig00000203_pilon:27685..29406- (Gracilaria gracilis GNS1m male)
TTGTACGACACAGCACTAACCGATAAGTTCATTGAGCTCGAAATTTCCAT
CCCGCCGTACGCCACTGGAGAGAAGAAATCTCGAGCCCTACGACTGGTTC
GACTTATATGGTTTGGCAATGAATACCAACATGAACGTGCAGTTGTCGAA
TTCATCGTACACAACCGCATCACCCCGGACCCAAATCGCCCCATCAGTCT
TTCTGGTTTATCGTTAGCGCCTACACAGTATGGTGCAGTGACGCAAACGT
CACCCATCAATGGTCATCCCGTTTTGCATACCCCCCACCATGCACAACAG
CATTCCATTCCCACCTCCATAACACCTCAAGAGTACGCCGTTCAACAGGC
AGTCCAACGTTTGACCTTTGAAGACAACGTGAATACCCATGGCCCTGTCT
CGCCTGCTGCGTCTAACATCTACGAACACGTGCATAACCTCCCCTGTGTC
CCTCCATCAAATCAAACTGCTAACCGATTGCAACGCAACAGCGTTGATTA
TCGTATGCCGAATGCAGCCCGCCCCCCTGCCCACCATCGAACACCAGCCC
ATGCTCCTCCGAACCATTCAGTGCCAGTTCCCTCTCATCACCCATCACAA
AATCAGAGTACACATGGTCACCATGCCACACAGTCCGCTAACCGAAGCCC
TGCAGACCGTCAATCCAAACTGGCTGTTGCCTTCTCCACCGCATACAAAG
ATGCGTCCAATCGCTACAGTAGCACTATCGACGATTCATGGCCAGAAAAG
AAGGAAATCTTCGAAGATATCGCACAGAACTACATATGCAGCAAATCCGA
AGCCTTAGGTTTCTTGAACAACCTATTCACTGGTGGAGCTCGCACAATTT
TCCGCCAACATGTCAAGGGTAAAGTGCGGGATTACGATGAGGCTACAAAA
ATTTTGGAATAATATTTCAATAACGAGACAGCTCAAGCCCGTATACTTGC
AAAACTACAGGCTCTAACGTTCGAAGAGTTCACAAGCCATGACGCCTCCC
TCAATGACGCCTTCGCCAAACTCACGACTAAGATCGAAGAACTGTTTCCC
CGTATTCCCTTTCAGCGTCAAGACGACTATCAAAAGAGGCTCATACTTTC
GAAGACAGTGAAACACCAACCTTGGGCAACCGCAACTCTTGATCGTACTA
CGGCAGAACTACCGACCTTCACCGCCCTTTCAGGTGCTCTGGCGCATGTC
CTTCAGAAAAATGTTGCTCGTACTTCGAACAACCCGGTGCAGACCAACCC
GGCCAACGGAGCCTTCTACACGAACCCCCGCTTCGGTCGCTATTCTAACC
GTGGCCAGCATCACCGCCAGGCACGTAGTTCGGACTCACCCAGTTCCAAG
GAACACCGACGCCCGCACCACAATTCCTACCACAATGATTACCGTCGTAA
CAATTACAACTCTCAGCGACAACCCCGTCAGATGTACCGTATTCGTCGCC
ATTTCAACCACTCCCGTGGAACACGCGGCGCGTACTACGTCCTCCAGGAT
GATCTGGAACCAATCACAGACAACACCGAAGACGTCCCCTCCGACCATGA
AGATCACGATGATGGCACAGACCCTACCGAACCCAACACGCAAGACAGTC
CGCCCGACCAAAACGAAGATAGCACCGACACGACCCCTACCTACTTCATA
CAAACAGCCACTGACTCTGCAAATTTCCATGCCACCATGCAACATCCAGA
CTTCTCCGATCAGCCTTTTTAG
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Coding sequence (CDS) from alignment at tig00000203_pilon:27685..29406-

>Ggra591.t1 ID=Ggra591.t1|Name=Ggra591.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1635bp|location=Sequence derived from alignment at tig00000203_pilon:27685..29406- (Gracilaria gracilis GNS1m male)
TTGTACGACACAGCACTAACCGATAAGTTCATTGAGCTCGAAATTTCCAT
CCCGCCGTACGCCACTGGAGAGAAGAAATCTCGAGCCCTACGACTGGTTC
GACTTATATGGTTTGGCAATGAATACCAACATGAACGTGCAGTTGTCGAA
TTCATCGTACACAACCGCATCACCCCGGACCCAAATCGCCCCATCAGTCT
TTCTGGTTTATCGTTAGCGCCTACACAGTATGGTGCAGTGACGCAAACGT
CACCCATCAATGGTCATCCCGTTTTGCATACCCCCCACCATGCACAACAG
CATTCCATTCCCACCTCCATAACACCTCAAGAGTACGCCGTTCAACAGGC
AGTCCAACGTTTGACCTTTGAAGACAACGTGAATACCCATGGCCCTGTCT
CGCCTGCTGCGTCTAACATCTACGAACACGTGCATAACCTCCCCTGTGTC
CCTCCATCAAATCAAACTGCTAACCGATTGCAACGCAACAGCGTTGATTA
TCGTATGCCGAATGCAGCCCGCCCCCCTGCCCACCATCGAACACCAGCCC
ATGCTCCTCCGAACCATTCAGTGCCAGTTCCCTCTCATCACCCATCACAA
AATCAGAGTACACATGGTCACCATGCCACACAGTCCGCTAACCGAAGCCC
TGCAGACCGTCAATCCAAACTGGCTGTTGCCTTCTCCACCGCATACAAAG
ATGCGTCCAATCGCTACAGTAGCACTATCGACGATTCATGGCCAGAAAAG
AAGGAAATCTTCGAAGATATCGCACAGAACTACATATGCAGCAAATCCGA
AGCCTTAGGTTTCTTGAACAACCTATTCACTGGTGGAGCTCGCACAATTT
TCCGCCAACATGTCAAGGGTAAAGCTCTAACGTTCGAAGAGTTCACAAGC
CATGACGCCTCCCTCAATGACGCCTTCGCCAAACTCACGACTAAGATCGA
AGAACTGTTTCCCCGTATTCCCTTTCAGCGTCAAGACGACTATCAAAAGA
GGCTCATACTTTCGAAGACAGTGAAACACCAACCTTGGGCAACCGCAACT
CTTGATCGTACTACGGCAGAACTACCGACCTTCACCGCCCTTTCAGGTGC
TCTGGCGCATGTCCTTCAGAAAAATGTTGCTCGTACTTCGAACAACCCGG
TGCAGACCAACCCGGCCAACGGAGCCTTCTACACGAACCCCCGCTTCGGT
CGCTATTCTAACCGTGGCCAGCATCACCGCCAGGCACGTAGTTCGGACTC
ACCCAGTTCCAAGGAACACCGACGCCCGCACCACAATTCCTACCACAATG
ATTACCGTCGTAACAATTACAACTCTCAGCGACAACCCCGTCAGATGTAC
CGTATTCGTCGCCATTTCAACCACTCCCGTGGAACACGCGGCGCGTACTA
CGTCCTCCAGGATGATCTGGAACCAATCACAGACAACACCGAAGACGTCC
CCTCCGACCATGAAGATCACGATGATGGCACAGACCCTACCGAACCCAAC
ACGCAAGACAGTCCGCCCGACCAAAACGAAGATAGCACCGACACGACCCC
TACCTACTTCATACAAACAGCCACTGACTCTGCAAATTTCCATGCCACCA
TGCAACATCCAGACTTCTCCGATCAGCCTTTTTAG
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