Ggra10737.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10737.t1
Unique NameGgra10737.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length139
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:41138..41554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10737Ggra10737Gracilaria gracilis GNS1m malegenetig00000200_pilon 41138..41554 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10737.t1.stop1Ggra10737.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000200_pilon 41138..41140 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10737.t1.CDS1Ggra10737.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000200_pilon 41138..41554 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10737.t1.exon1Ggra10737.t1.exon1Gracilaria gracilis GNS1m maleexontig00000200_pilon 41138..41554 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10737.t1.start1Ggra10737.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000200_pilon 41552..41554 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10737.t1Ggra10737.t1Gracilaria gracilis GNS1m malepolypeptidetig00000200_pilon 41138..41554 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10737.t1 ID=Ggra10737.t1|Name=Ggra10737.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=139bp
MNNLGLLIQASLLVESNKLYEVDKFSVVSKDVKSSIGQRMTAWTILRKLL
CSAECTIKSTREMRKETVYENQLKRYLGDFSHMVSVIVQLYTQEVDFLHA
VKREIVYLFSAKSELLDSYDRKNCAREERCGGGRQQAN*
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spliced messenger RNA

>Ggra10737.t1 ID=Ggra10737.t1|Name=Ggra10737.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=417bp|location=Sequence derived from alignment at tig00000200_pilon:41138..41554- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACAATCTAGGCTTGTTAATTCAAGCGTCGCTGCTGGTGGAGTCCAA
CAAGCTGTACGAAGTGGACAAGTTCTCTGTGGTGAGCAAAGACGTGAAAT
CATCGATTGGACAGAGAATGACGGCTTGGACAATCCTTCGGAAGCTGCTT
TGTTCAGCTGAATGTACCATAAAATCAACCAGAGAGATGCGCAAGGAGAC
GGTGTACGAGAACCAACTCAAGAGGTATCTCGGAGACTTTTCGCACATGG
TTTCCGTCATCGTGCAACTGTACACGCAGGAAGTTGACTTTCTTCACGCT
GTGAAGCGCGAAATTGTTTACTTGTTCTCTGCCAAGAGTGAGCTGCTTGA
CAGTTATGATAGGAAGAATTGCGCGAGAGAAGAACGTTGTGGTGGAGGAA
GGCAACAAGCAAATTAA
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protein sequence of Ggra10737.t1

>Ggra10737.t1 ID=Ggra10737.t1|Name=Ggra10737.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=139bp
MNNLGLLIQASLLVESNKLYEVDKFSVVSKDVKSSIGQRMTAWTILRKLL
CSAECTIKSTREMRKETVYENQLKRYLGDFSHMVSVIVQLYTQEVDFLHA
VKREIVYLFSAKSELLDSYDRKNCAREERCGGGRQQAN*
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mRNA from alignment at tig00000200_pilon:41138..41554-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10737.t1 ID=Ggra10737.t1|Name=Ggra10737.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=417bp|location=Sequence derived from alignment at tig00000200_pilon:41138..41554- (Gracilaria gracilis GNS1m male)
ATGAACAATCTAGGCTTGTTAATTCAAGCGTCGCTGCTGGTGGAGTCCAA
CAAGCTGTACGAAGTGGACAAGTTCTCTGTGGTGAGCAAAGACGTGAAAT
CATCGATTGGACAGAGAATGACGGCTTGGACAATCCTTCGGAAGCTGCTT
TGTTCAGCTGAATGTACCATAAAATCAACCAGAGAGATGCGCAAGGAGAC
GGTGTACGAGAACCAACTCAAGAGGTATCTCGGAGACTTTTCGCACATGG
TTTCCGTCATCGTGCAACTGTACACGCAGGAAGTTGACTTTCTTCACGCT
GTGAAGCGCGAAATTGTTTACTTGTTCTCTGCCAAGAGTGAGCTGCTTGA
CAGTTATGATAGGAAGAATTGCGCGAGAGAAGAACGTTGTGGTGGAGGAA
GGCAACAAGCAAATTAA
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Coding sequence (CDS) from alignment at tig00000200_pilon:41138..41554-

>Ggra10737.t1 ID=Ggra10737.t1|Name=Ggra10737.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=417bp|location=Sequence derived from alignment at tig00000200_pilon:41138..41554- (Gracilaria gracilis GNS1m male)
ATGAACAATCTAGGCTTGTTAATTCAAGCGTCGCTGCTGGTGGAGTCCAA
CAAGCTGTACGAAGTGGACAAGTTCTCTGTGGTGAGCAAAGACGTGAAAT
CATCGATTGGACAGAGAATGACGGCTTGGACAATCCTTCGGAAGCTGCTT
TGTTCAGCTGAATGTACCATAAAATCAACCAGAGAGATGCGCAAGGAGAC
GGTGTACGAGAACCAACTCAAGAGGTATCTCGGAGACTTTTCGCACATGG
TTTCCGTCATCGTGCAACTGTACACGCAGGAAGTTGACTTTCTTCACGCT
GTGAAGCGCGAAATTGTTTACTTGTTCTCTGCCAAGAGTGAGCTGCTTGA
CAGTTATGATAGGAAGAATTGCGCGAGAGAAGAACGTTGTGGTGGAGGAA
GGCAACAAGCAAATTAA
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