Ggra10836.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10836.t1
Unique NameGgra10836.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:209437..210378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10836Ggra10836Gracilaria gracilis GNS1m malegenetig00000192_pilon 209437..210378 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10836.t1.stop1Ggra10836.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000192_pilon 209437..209439 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10836.t1.CDS1Ggra10836.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000192_pilon 209437..210378 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10836.t1.exon1Ggra10836.t1.exon1Gracilaria gracilis GNS1m maleexontig00000192_pilon 209437..210378 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10836.t1.start1Ggra10836.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000192_pilon 210376..210378 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10836.t1Ggra10836.t1Gracilaria gracilis GNS1m malepolypeptidetig00000192_pilon 209437..210378 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10836.t1 ID=Ggra10836.t1|Name=Ggra10836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=314bp
MGGDDDDASWGWAEGNHARHYKSARMRRPRTRSAASSQPRWDRVDDDARK
RKKNKKNKKKKDNKRGGEREPLGWADNGWADNGWADNGWAGNDWNDDNAR
KDNNKHKHKRKDKRGAKRAAAFKEPWNWGRSSSSSSSSEPRSFYHHDSAP
SRRKHKKKRNKDGNKRRDGHHGDAWVAGGGGDQWGDGRHSVKWGDERHSV
KWGDERHSGRRSDERRGSKWSDERRSAKWGGGWHGHSQRGSASTSTRPRR
ARRRNESRTALATAGSFDAEREADFLPRWANGSDGRRRKVKRKKKRRKGG
GGIWWMFKACFGK*
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spliced messenger RNA

>Ggra10836.t1 ID=Ggra10836.t1|Name=Ggra10836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000192_pilon:209437..210378- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGGCGACGACGACGACGCTAGCTGGGGCTGGGCGGAGGGCAACCA
CGCGCGCCACTACAAGTCTGCGCGCATGCGGCGGCCGCGGACCAGGTCGG
CCGCGTCCTCGCAGCCGCGGTGGGACCGCGTCGACGACGACGCGCGCAAG
CGCAAGAAGAACAAGAAGAACAAGAAGAAAAAGGACAACAAGCGCGGCGG
CGAGCGCGAGCCGCTCGGCTGGGCGGACAACGGCTGGGCGGACAACGGCT
GGGCGGACAACGGCTGGGCGGGCAATGACTGGAACGATGACAATGCGCGC
AAGGACAACAACAAGCACAAGCACAAGCGCAAGGACAAGCGCGGCGCCAA
GCGCGCAGCGGCGTTCAAGGAGCCGTGGAACTGGGGGCGCTCGTCGTCGT
CGTCGTCAAGCTCGGAGCCACGCTCATTCTACCACCACGACAGCGCGCCG
TCGCGGAGGAAGCACAAGAAGAAGAGGAACAAGGACGGAAACAAGCGGCG
CGACGGCCACCACGGCGACGCGTGGGTGGCGGGCGGCGGCGGCGACCAGT
GGGGCGACGGGCGCCACAGCGTCAAGTGGGGCGACGAGCGCCACAGCGTC
AAGTGGGGCGACGAGCGACACAGCGGCAGGCGGAGCGACGAGCGGCGCGG
CAGCAAGTGGAGCGACGAGCGGCGCAGCGCCAAGTGGGGCGGCGGCTGGC
ACGGCCACAGCCAGCGCGGCAGCGCGTCCACGTCCACGCGCCCGCGCCGC
GCACGGCGGCGGAACGAGAGCCGCACGGCGCTGGCCACCGCGGGCTCGTT
CGACGCCGAGCGCGAGGCGGATTTTTTGCCGCGGTGGGCGAATGGCAGCG
ACGGCAGGAGGAGGAAGGTGAAGAGGAAGAAGAAGCGGAGGAAGGGCGGC
GGTGGCATTTGGTGGATGTTCAAGGCGTGCTTTGGCAAGTAG
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protein sequence of Ggra10836.t1

>Ggra10836.t1 ID=Ggra10836.t1|Name=Ggra10836.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MGGDDDDASWGWAEGNHARHYKSARMRRPRTRSAASSQPRWDRVDDDARK
RKKNKKNKKKKDNKRGGEREPLGWADNGWADNGWADNGWAGNDWNDDNAR
KDNNKHKHKRKDKRGAKRAAAFKEPWNWGRSSSSSSSSEPRSFYHHDSAP
SRRKHKKKRNKDGNKRRDGHHGDAWVAGGGGDQWGDGRHSVKWGDERHSV
KWGDERHSGRRSDERRGSKWSDERRSAKWGGGWHGHSQRGSASTSTRPRR
ARRRNESRTALATAGSFDAEREADFLPRWANGSDGRRRKVKRKKKRRKGG
GGIWWMFKACFGK*
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mRNA from alignment at tig00000192_pilon:209437..210378-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10836.t1 ID=Ggra10836.t1|Name=Ggra10836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000192_pilon:209437..210378- (Gracilaria gracilis GNS1m male)
ATGGGCGGCGACGACGACGACGCTAGCTGGGGCTGGGCGGAGGGCAACCA
CGCGCGCCACTACAAGTCTGCGCGCATGCGGCGGCCGCGGACCAGGTCGG
CCGCGTCCTCGCAGCCGCGGTGGGACCGCGTCGACGACGACGCGCGCAAG
CGCAAGAAGAACAAGAAGAACAAGAAGAAAAAGGACAACAAGCGCGGCGG
CGAGCGCGAGCCGCTCGGCTGGGCGGACAACGGCTGGGCGGACAACGGCT
GGGCGGACAACGGCTGGGCGGGCAATGACTGGAACGATGACAATGCGCGC
AAGGACAACAACAAGCACAAGCACAAGCGCAAGGACAAGCGCGGCGCCAA
GCGCGCAGCGGCGTTCAAGGAGCCGTGGAACTGGGGGCGCTCGTCGTCGT
CGTCGTCAAGCTCGGAGCCACGCTCATTCTACCACCACGACAGCGCGCCG
TCGCGGAGGAAGCACAAGAAGAAGAGGAACAAGGACGGAAACAAGCGGCG
CGACGGCCACCACGGCGACGCGTGGGTGGCGGGCGGCGGCGGCGACCAGT
GGGGCGACGGGCGCCACAGCGTCAAGTGGGGCGACGAGCGCCACAGCGTC
AAGTGGGGCGACGAGCGACACAGCGGCAGGCGGAGCGACGAGCGGCGCGG
CAGCAAGTGGAGCGACGAGCGGCGCAGCGCCAAGTGGGGCGGCGGCTGGC
ACGGCCACAGCCAGCGCGGCAGCGCGTCCACGTCCACGCGCCCGCGCCGC
GCACGGCGGCGGAACGAGAGCCGCACGGCGCTGGCCACCGCGGGCTCGTT
CGACGCCGAGCGCGAGGCGGATTTTTTGCCGCGGTGGGCGAATGGCAGCG
ACGGCAGGAGGAGGAAGGTGAAGAGGAAGAAGAAGCGGAGGAAGGGCGGC
GGTGGCATTTGGTGGATGTTCAAGGCGTGCTTTGGCAAGTAG
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Coding sequence (CDS) from alignment at tig00000192_pilon:209437..210378-

>Ggra10836.t1 ID=Ggra10836.t1|Name=Ggra10836.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=942bp|location=Sequence derived from alignment at tig00000192_pilon:209437..210378- (Gracilaria gracilis GNS1m male)
ATGGGCGGCGACGACGACGACGCTAGCTGGGGCTGGGCGGAGGGCAACCA
CGCGCGCCACTACAAGTCTGCGCGCATGCGGCGGCCGCGGACCAGGTCGG
CCGCGTCCTCGCAGCCGCGGTGGGACCGCGTCGACGACGACGCGCGCAAG
CGCAAGAAGAACAAGAAGAACAAGAAGAAAAAGGACAACAAGCGCGGCGG
CGAGCGCGAGCCGCTCGGCTGGGCGGACAACGGCTGGGCGGACAACGGCT
GGGCGGACAACGGCTGGGCGGGCAATGACTGGAACGATGACAATGCGCGC
AAGGACAACAACAAGCACAAGCACAAGCGCAAGGACAAGCGCGGCGCCAA
GCGCGCAGCGGCGTTCAAGGAGCCGTGGAACTGGGGGCGCTCGTCGTCGT
CGTCGTCAAGCTCGGAGCCACGCTCATTCTACCACCACGACAGCGCGCCG
TCGCGGAGGAAGCACAAGAAGAAGAGGAACAAGGACGGAAACAAGCGGCG
CGACGGCCACCACGGCGACGCGTGGGTGGCGGGCGGCGGCGGCGACCAGT
GGGGCGACGGGCGCCACAGCGTCAAGTGGGGCGACGAGCGCCACAGCGTC
AAGTGGGGCGACGAGCGACACAGCGGCAGGCGGAGCGACGAGCGGCGCGG
CAGCAAGTGGAGCGACGAGCGGCGCAGCGCCAAGTGGGGCGGCGGCTGGC
ACGGCCACAGCCAGCGCGGCAGCGCGTCCACGTCCACGCGCCCGCGCCGC
GCACGGCGGCGGAACGAGAGCCGCACGGCGCTGGCCACCGCGGGCTCGTT
CGACGCCGAGCGCGAGGCGGATTTTTTGCCGCGGTGGGCGAATGGCAGCG
ACGGCAGGAGGAGGAAGGTGAAGAGGAAGAAGAAGCGGAGGAAGGGCGGC
GGTGGCATTTGGTGGATGTTCAAGGCGTGCTTTGGCAAGTAG
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