Ggra9992.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9992.t1
Unique NameGgra9992.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length537
Homology
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IMK3 (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMK3_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 2.760e-94
Identity = 156/298 (52.35%), Postives = 208/298 (69.80%), Query Frame = 0
Query:  236 ISLPDLTNHFPLFDGNVGNAELQCPLLNLTVSNTQIRVQDIGLFYSLINHYRSSGTEIGTLFSELDRSSVAPIEESFSLNIALDTSAGIGCSYLKEGDEARLRGEVQKLLELETTATP----DAEVKPSATANATEENGEKACFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRSHYIYANGALKTAGSVKPGELLT-VHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            +S+  +  HFPL  GNV N  L+C LLN ++ N QI  QD+G F++L+N Y+ SG+ +G+  +E+D SS+AP+E SFSLNIA+D+  GIGCSYLKE DE R+R  + +L +  + ++P    +A V PS   ++T+ N E ACFP+ A VK+ NGS   MSE++ GD V+DGDG++SKV+MFTH+D     EFV LKT  GS+V S  HY+Y N  LK+A  VK G++L+ V GEN+ E  S E V+ K+T+Y  GLYNPQT SG +VVFWDGDGV  S YT S+ P LAH LLAPLR
Sbjct:    1 MSIESVAEHFPLLVGNVMNGILECALLNASIPNAQIVAQDMGYFHTLLNFYKKSGSTLGSPVTEIDVSSLAPVEHSFSLNIAVDSVNGIGCSYLKESDEIRIRQGISRLHDTPSPSSPVPTQNASVSPSEGGDSTK-NSESACFPSTAWVKLSNGSFAMMSEVQEGDMVLDGDGTYSKVLMFTHADSEVESEFVLLKTSIGSIVTSPLHYVYVNSELKSARYVKVGDMLSQVKGENT-ESISVEQVIEKKTLYLPGLYNPQTVSGNIVVFWDGDGVMASTYTESIPPVLAHILLAPLR 296          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IMG8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG8_9FLOR)

HSP 1 Score: 172 bits (436), Expect = 6.530e-47
Identity = 81/133 (60.90%), Postives = 101/133 (75.94%), Query Frame = 0
Query:   18 SRSPPVSVPLDGSLKHRTYGVASSIFRKRSGSLGLVAEPIPDTRRNSAARPFGCHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHVLPAQSSKPPQGISVPQNLSGV 150
            S + PV+  LD + K   YG++SS+ RKRS  LGL+ +P+PDTRR++A+RPFGCHLCKGRFERIGHLNAH+DAVHN+R+PYKC YE+CGK FSHKSSLYRHVRGIHE++      Q+S  P  +       GV
Sbjct:   86 SSTQPVNFELDPNFK--AYGMSSSLNRKRSNCLGLMIDPVPDTRRSTASRPFGCHLCKGRFERIGHLNAHVDAVHNARQPYKCHYEHCGKAFSHKSSLYRHVRGIHERRAQE---QASATPSTLPFKSQGKGV 213          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IYD5 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD5_9FLOR)

HSP 1 Score: 125 bits (313), Expect = 1.660e-26
Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 0
Query:  371 EKACFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRSHYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            + ACFP+ AQV + +G++  + +LK+GD + DG+G +S+V++F H++      FV L    G++  S  HY+  NG L TA SVK G+ +++   N S       V     V  +GLYNPQT+SG + VFW G  V  S YT+S+ P LAH ++ PLR
Sbjct:  660 DSACFPSLAQVLLADGTLKALQDLKVGDYIRDGEGEYSRVLLFAHANPDVMSSFVLLNFNSGALPISAKHYLPVNGNLLTAESVKVGDRISLLHMNPSYPGEWTTVTEIGHVSMKGLYNPQTSSGSMAVFWKGQPVITSTYTSSLDPVLAHIMMWPLR 817          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IKI5 (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 5.100e-26
Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 0
Query:  374 CFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRS-HYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLRLL 530
            CFPA+A V++++GS   M EL++GD ++ G G +S+V +FTH   R  + FV+L T  G+ V   S H++Y NG L  AGS + G+ +TV    S E    E V    TV  +GL+NPQT  G +VV    DGV  S YT +++P +AH LLAPLR+L
Sbjct:  662 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTV---GSGE---TEMVTKVSTVVDKGLFNPQTIHGNIVV----DGVVSSTYTHTIAPMMAHGLLAPLRVL 809          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IKL0 (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 1.220e-25
Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 0
Query:  374 CFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRS-HYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            CFPA+A V++++GS   M EL++GD ++ G G +S+V +FTH   R  + FV+L T  G+ V   S H++Y NG L  AGS + G+ +TV    S E    E V    TV  +GL+NPQT  G +VV    DGV  S YT +++P +AH LLAPLR
Sbjct:  666 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTV---GSGE---TEMVTKVSTVVDKGLFNPQTIHGNIVV----DGVVSSTYTHTIAPMMAHGLLAPLR 811          
BLAST of Ggra9992.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 115 bits (288), Expect = 1.350e-25
Identity = 69/186 (37.10%), Postives = 107/186 (57.53%), Query Frame = 0
Query:  346 ELETTATPD-AEVKPSATANAT-EENGEKACFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVA-SRSHYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            E E  AT D +++ PS + +   E++ +  CFPA A V+++NG+   MS++++GD V  G   FS V MFTH     ++ FV L T  G  ++ ++ HY+Y NG +  A +V+ G+ +T+    +S       V    T  ARGLYNPQT  G ++V    +G+  + YT +V   +AH+LLAPLR
Sbjct:   39 ESEPAATDDLSDLSPSPSLDDEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSS------VTQVGTEIARGLYNPQTVHGDIIV----NGLLATTYTTTVERSMAHALLAPLR 214          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 115 bits (289), Expect = 4.590e-24
Identity = 72/178 (40.45%), Postives = 97/178 (54.49%), Query Frame = 0
Query:  354 DAEVKPSATANATEENGE--KACFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKG-SVVASRSHYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            +A++ P  + +  EE  +   ACFPA A V++++GS  TM  +++GD V    G FS V MFTH      + FVRL    G S+  ++ HY+Y NG L  A SV  G+ +       S  A A        V +RGLYNPQT +G +VV    +GVR S YT +V    AHSLL PLR
Sbjct:  284 EAQISPEGSDDEEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVSVSAVAR-------VVSRGLYNPQTVNGNIVV----NGVRASTYTTAVEIKTAHSLLLPLR 450          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A7S1T873 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T873_9RHOD)

HSP 1 Score: 114 bits (285), Expect = 5.490e-24
Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 0
Query:  359 PSATANATEENGEKA--CFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRSHYIYA-NGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLRLL 530
            PS T N T E    +  CFPA++ V   +G +  M EL++GD V+  DGS+S V  F H +      F+ L+T  G +  S SHY+Y  +G ++TA SV+ G+ L       S    A  V   + +  RGL+NP T+SG LVV    DG + S YT +V+P +AH LLAPLR L
Sbjct:  199 PSPTLNTTAERNSSSSTCFPASSTVITLSG-LRKMEELELGDSVMTSDGSYSPVFFFGHREPNTWHNFIELETENGKLTLSPSHYVYLLDGTMRTAASVQIGDTLV------SASGKAREVTGLKNIRERGLFNPHTSSGHLVV----DGFKVSCYTETVNPHVAHVLLAPLRAL 362          
BLAST of Ggra9992.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 1.590e-23
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 0
Query:  367 EENGEKACFPAAAQVKVKNGSMVTMSELKMGDEVVDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVA-SRSHYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLR 528
            +++ +  CFPA A V++++GS   M ++++GD V+   G FS V MFTH     R+ FV ++T  G+ ++ +  HY+Y NG L  A +VK G+ L +        +S   V    TV + GL+NPQT  G +VV    +G++ S YT +V P LAH+LL+PLR
Sbjct:  303 DDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLML------ADSSLTDVTQVSTVTSTGLFNPQTLHGDIVV----NGLKASTYTTAVEPGLAHALLSPLR 455          
BLAST of Ggra9992.t1 vs. uniprot
Match: R7Q909 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q909_CHOCR)

HSP 1 Score: 108 bits (270), Expect = 3.130e-21
Identity = 59/165 (35.76%), Postives = 101/165 (61.21%), Query Frame = 0
Query:  366 TEENGEKACFPAAAQVKVKNGSMVTMSELKMGDEV-VDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRSHYIYANGALKTAGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVFWDGDGVRCSAYTASVSPPLAHSLLAPLRL 529
            +EE+   ACFP+ A V++++G M+ M +LK+GDEV V   G +S+V  F+H +G    EF+R++T   S+  S  H +YANG + TA SV+ G+ ++     S +  ++  V++ + + ++GL+NP T  G +VV    +G+  + +T++V P +A  LL P  L
Sbjct:  496 SEEDSGPACFPSDAVVELRDGRMIKMDQLKIGDEVKVGATGEYSEVFFFSHRNGDRINEFIRIETESNSMTVSPGHLVYANGKVATASSVRVGDSVSA----SQDTVNSVTVVTVQRIKSKGLHNPHTFHGDIVV----NGLVATTFTSAVHPSVARLLLIPFHL 652          
The following BLAST results are available for this feature:
BLAST of Ggra9992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMK32.760e-9452.35Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
A0A2V3IMG86.530e-4760.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYD51.660e-2640.51Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKI55.100e-2644.30Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKL01.220e-2544.23DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]
R7Q6191.350e-2537.10HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IGP94.590e-2440.45Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S1T8735.490e-2440.57Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IX711.590e-2338.65Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7Q9093.130e-2135.76HintN domain-containing protein n=1 Tax=Chondrus c... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 372..464
e-value: 4.6E-6
score: 36.1
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 69..92
e-value: 1.9
score: 17.5
coord: 98..123
e-value: 6.0E-4
score: 29.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 100..123
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 71..92
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 69..97
score: 11.094336
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 98..128
score: 13.110296
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 374..512
e-value: 5.1E-27
score: 97.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 100..123
e-value: 5.3E-9
score: 38.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 61..99
e-value: 2.9E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 353..531
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 353..531
NoneNo IPR availableCDDcd00081Hintcoord: 374..493
e-value: 2.25644E-11
score: 59.5902
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 371..533
e-value: 2.9E-23
score: 82.5
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 374..499
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 67..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:126372..129257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9992.t1Ggra9992.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 126372..129257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9992.t1 ID=Ggra9992.t1|Name=Ggra9992.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=537bp
MPQGPSAEAAHPPAAPDSRSPPVSVPLDGSLKHRTYGVASSIFRKRSGSL
GLVAEPIPDTRRNSAARPFGCHLCKGRFERIGHLNAHIDAVHNSRKPYKC
QYENCGKCFSHKSSLYRHVRGIHEKKGHVLPAQSSKPPQGISVPQNLSGV
YNYVSVKDLLRILPEDPFFLALVCPKMVIVNESNAGTVANVTLVADEEGD
SRCVFSSNGSTAAAEVAFQMLSSGTSPINNSEGGKISLPDLTNHFPLFDG
NVGNAELQCPLLNLTVSNTQIRVQDIGLFYSLINHYRSSGTEIGTLFSEL
DRSSVAPIEESFSLNIALDTSAGIGCSYLKEGDEARLRGEVQKLLELETT
ATPDAEVKPSATANATEENGEKACFPAAAQVKVKNGSMVTMSELKMGDEV
VDGDGSFSKVVMFTHSDGRARWEFVRLKTGKGSVVASRSHYIYANGALKT
AGSVKPGELLTVHGENSSEKASAEPVLSKETVYARGLYNPQTASGKLVVF
WDGDGVRCSAYTASVSPPLAHSLLAPLRLLATLLPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR013087Znf_C2H2_type
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf
IPR036236Znf_C2H2_sf