Ggra9990.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9990.t1
Unique NameGgra9990.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length521
Homology
BLAST of Ggra9990.t1 vs. uniprot
Match: A0A2V3IMJ8 (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ8_9FLOR)

HSP 1 Score: 639 bits (1649), Expect = 3.330e-225
Identity = 327/523 (62.52%), Postives = 404/523 (77.25%), Query Frame = 0
Query:    1 MYSQGGTSPTSRPVHFENRALVHAVQHISRNLVRRVGLRYGDTVYGTLLSQIWGQSKYATIDVLVRKRQESLDRKHKHRDRSPTKVVNSRDLHDNASL----LSEKEVRSHDDEEKKKKMKKLNDARDKLVRILRRVKDDTMAVNERRITMQIMDRPGGLDVDALRRLWGVPRAVFEATGLYNYFSKHGDEKLIVDFYDTHIWGAQPDSRIFNILYWKESGDSHRTDGSSKPQSRCCRTISQGIIRNVVENLLTRRRSPLFEKNMDIATEIVLYALHPDGHVVTFRESALKEAGFFQGLQAYEYSRSFAASLQNLHLAKLNRMLKDLKAVKELETNRRGAKGSVEFLSLATLRRYCSERDTLTERALHAVVDRYARKGKSELHGTEELQISCAWFIRMYLALVGSSTNLGLRYWFSVLDQDGDGWINLGDVAHFYSERKVESEKRNGIKLTDVQCLWIRLCAMSRVAPCGKGLNLSSLKELGKEEREFVMCALLIRRADDGNLTDVAATIADSDGSSDASVEL 519
            MYSQ  + P   P+ FENRAL+HAV HIS NL++R G++ GD  Y  LLS+IWGQS  ATI++L R+R+E   RK K      T   +  D+   A      L E+ + S D++E+ +K+KKLN ARDKLVRILRRVKDDT+AVNERR+T++I++RPG L+VDALRRLWGVP+ VFE   LY YF  + +E+ I DFYD H+W  +PD+R+FNIL+WKE+    ++  +    S C R+IS  IIR VV+ LLT+RRSPLFE+NMD+ATE+VLYALHPDGH+ +FRESALK AGFFQGL AYEYSRSF  SLQNLHLAKLNRMLKDL+AVKELE  R       +  SL TL +YCSERDTLT+RAL +V+DRY R+        E L++S A F+R+YL+L GS+T+ GL+YWFSVLDQD DGWI++GDVA+FYSERK ESEKRNGIKL+DV+CLW+RLCAMSRV+P GKGL+L +LKELGK+EREFVMCALLIRRADDGNLTDVAAT+A+SD  SD S+ L
Sbjct:    1 MYSQAKSFPELHPIRFENRALLHAVSHISANLIKRAGVKSGDATYANLLSKIWGQSSVATIEILARRREECRIRKRK------TPEFSKEDVRFKAKSGTVSLFEQTMLSDDEKERIRKLKKLNAARDKLVRILRRVKDDTLAVNERRLTVEIINRPGELNVDALRRLWGVPKVVFEVAQLYEYFKSNVEERKICDFYDKHMWSNEPDARVFNILHWKEARQRQQSGKARDRYSSCFRSISHAIIRKVVKLLLTKRRSPLFERNMDVATEVVLYALHPDGHIDSFRESALKAAGFFQGLTAYEYSRSFTGSLQNLHLAKLNRMLKDLRAVKELEAERNNHNNLADGFSLQTLLQYCSERDTLTKRALFSVIDRYVRRENESESNRENLRVSHADFVRLYLSLTGSATDTGLKYWFSVLDQDSDGWISVGDVAYFYSERKAESEKRNGIKLSDVRCLWVRLCAMSRVSPNGKGLSLQALKELGKDEREFVMCALLIRRADDGNLTDVAATLAESDDGSDGSLRL 517          
BLAST of Ggra9990.t1 vs. uniprot
Match: R7Q693 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q693_CHOCR)

HSP 1 Score: 224 bits (571), Expect = 3.760e-67
Identity = 111/192 (57.81%), Postives = 149/192 (77.60%), Query Frame = 0
Query:  319 MLKDLKAVKELETNRRGAKGSVEFLSLATLRRYCSERDTLTERALHAVVDRYARKGKSELHG-TEELQI---SCAWFIRMYLALVGSSTNLGLRYWFSVLDQDGDGWINLGDVAHFYSERKVESEKRNGIKLTDVQCLWIRLCAMSRVAPCGKGLNLSSLKELGKEEREFVMCALLIRRADDGNLTDVAATI 506
            MLKD+KAVK ++ + + A     FLSL  +  YC ER TLT+RA+H + +RY  + +  ++G T++  +   S   F+RM+LALVGS+T+ GL+YWFSVLDQDGDGW+ + DVA+FY+ERK ESEK+NGI LTDV+ LW+RLCAM+ V+P G+G++  S+KELGK +REFV CALLIRRADDGNLT+VAAT+
Sbjct:    1 MLKDIKAVKAIDKDTKNAVKDDNFLSLQAVTHYCCERGTLTDRAIHTIFNRYVSRTRVPVNGCTDDASVVGMSKLDFVRMFLALVGSATDKGLKYWFSVLDQDGDGWVGVADVAYFYAERKSESEKKNGILLTDVRSLWVRLCAMTGVSPKGRGISFRSMKELGKADREFVACALLIRRADDGNLTNVAATM 192          
The following BLAST results are available for this feature:
BLAST of Ggra9990.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMJ83.330e-22562.52Serine/threonine-protein phosphatase 2A regulatory... [more]
R7Q6933.760e-6757.81EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..333
NoneNo IPR availableCOILSCoilCoilcoord: 116..136
NoneNo IPR availableGENE3D1.10.238.10coord: 336..493
e-value: 7.2E-14
score: 54.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..92
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 415..427
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 402..437
score: 8.571685
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 385..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:120864..122426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9990.t1Ggra9990.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 120864..122426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9990.t1 ID=Ggra9990.t1|Name=Ggra9990.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=521bp
MYSQGGTSPTSRPVHFENRALVHAVQHISRNLVRRVGLRYGDTVYGTLLS
QIWGQSKYATIDVLVRKRQESLDRKHKHRDRSPTKVVNSRDLHDNASLLS
EKEVRSHDDEEKKKKMKKLNDARDKLVRILRRVKDDTMAVNERRITMQIM
DRPGGLDVDALRRLWGVPRAVFEATGLYNYFSKHGDEKLIVDFYDTHIWG
AQPDSRIFNILYWKESGDSHRTDGSSKPQSRCCRTISQGIIRNVVENLLT
RRRSPLFEKNMDIATEIVLYALHPDGHVVTFRESALKEAGFFQGLQAYEY
SRSFAASLQNLHLAKLNRMLKDLKAVKELETNRRGAKGSVEFLSLATLRR
YCSERDTLTERALHAVVDRYARKGKSELHGTEELQISCAWFIRMYLALVG
SSTNLGLRYWFSVLDQDGDGWINLGDVAHFYSERKVESEKRNGIKLTDVQ
CLWIRLCAMSRVAPCGKGLNLSSLKELGKEEREFVMCALLIRRADDGNLT
DVAATIADSDGSSDASVELH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair