Ggra999.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra999.t1
Unique NameGgra999.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length942
Homology
The following BLAST results are available for this feature:
BLAST of Ggra999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 83..131
e-value: 4.8E-7
score: 32.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..558
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 86..106
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 84..111
score: 10.92807
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 82..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:114251..118935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra999.t1Ggra999.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 114251..118935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra999.t1 ID=Ggra999.t1|Name=Ggra999.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=942bp
MANSSNRTTKWMPSLAPPRALASLLSYNGKVAGGAGAASGADGPSDELAR
AAMRLTGRDGRGAAAGGGGGGGGSASGGGAARVWRCSQCAERFDSRAKLT
AHAAAHGAEKYSCIQCGAKYRSTQALGVHNAPRVEAPPSSPLPLADREGA
LLREAASTSGAGTRRGSPLGEAPSASAGDARRKSSPVKKAPAALPDARRR
SSPPNKVAAAPGDGNRSASPSKKPASTSTAGDARKNALRTNKPSSTAAGG
RRKSSQLANAAPTDVKRKRSQAAKPAPIATDGRAKASRPNKSTPTPNDAK
KKTLLVDQPSTTSTNARKKTLLDKLTPMPTDARKNTSLPEHPPTPADPRK
KVSVLSKLTSSSTDAQGKGDKPATGARRKASQPAKPTPVSANVRRKSSQL
ERPTPPASSDKRRQSLPHAKPPPAASDARNKDACALKSTGLHLLFHGSQS
IETRKSAALTQRTQNSAPRSMALPLNAASQATVDEGQTTKAPSMPSQPAA
PVRTLTIGATTTPASSHRSFARLATSSSAVNSAAATLSGMQQSTLKKPHP
SIYAQNGDSVDQPRALLPGGIPPPAAPVSAAPVSHVTPPAMSTPGLVNTG
RQSSMAAHMNGNIGDEHVPVPASFHPHPHPPPPSPVAYQHAHSAYRPTPV
SQATPRRTGPPLPLFSQQAVNPTAPPRRHSIHPNLVNDIHPPSSVSLLPD
SQQLRRRHSVPIEPSRTWQMSQMRTPSTVPANTTAFLSPTAPSELQANTT
GSMQMDQTRNAVGNAPAPRIDTSFNGLAAAKEAVTLQPAPQYTAPRSAPP
AQSIPFVRTSRTNEEIVRMVTEKCDALVREITDQLRLQSAATRTEIDHLK
TLIVTLNGRVTAAEQGLGHIRKRTEDMLDQIVDRTDPQIRQMVGSACAAL
RHEFELATTDSLKEVEKLTIQNIQRGLGELGSTFKAVHPNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf