Ggra9988.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9988.t1
Unique NameGgra9988.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Homology
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A2V3IMI2 (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR)

HSP 1 Score: 496 bits (1278), Expect = 7.380e-174
Identity = 242/332 (72.89%), Postives = 279/332 (84.04%), Query Frame = 0
Query:   34 SSPRSLELPCATQPARFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQERFAADS 365
            SS  S  LPCATQPARF+V+  L   RLDRFIK +APGLPPGLIHRHIRQSRV +NG VER+RAT VR  DVI+FPG VKLGLTRRKKRPP +DVSLSEAML++ WLL+RDAR AVLNKPPGLPV+    + +SRTLEQLLC LG+GRYWLVHRL T  GGA++VARDVGA TLL+DYFR RMVTR+YWGLVAGVPR KKGIIDIDI G+KA+T+YRVVQMVD+HY+WLE EPRTGR+NQ+S HCA+GLGTPLVGD  Y + Q+ QHP+  GALQLCSRSITFPRLTQ  + + +K    A +L+TV APLP HMKDTW+RLG+QERFA+ S
Sbjct:   28 SSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPIT-GALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFASYS 358          
BLAST of Ggra9988.t1 vs. uniprot
Match: R7QAD7 (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR)

HSP 1 Score: 317 bits (811), Expect = 1.850e-102
Identity = 176/354 (49.72%), Postives = 224/354 (63.28%), Query Frame = 0
Query:   33 VSSPRSLELPCATQPA------RFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQ----EAQHPVDRGALQLC-------SRSITFPRLTQIHSP--KRQKRK----GKAPNLVTVQAPLPPHMKDTWRRLGMQERFAA 363
            +SSPR    P A   A      +++V     G+RLDRFIK  APG+PPGLI R IR+  + V        A  VR  DV++FPG +KLGL+R K++P  +D+SL+E+ ++K W+L+RDAR  VLNKP GLP         +R LE LL G+G GRYWLVHRL    GGAI+VARDVGA  LL+++FR R+V + YW LV G  + K G ID+ I GK+A T YRV+Q +D  + WLEL PRTGR +Q+ IHCADGLGTP+VGD  Y +      + Q+ VD G L L        SR I FP+LTQ  S   KR KR     G     +T +APLPPHMKDTW+R G++E FAA
Sbjct:   48 LSSPRHSPQPPAPTIAPNVKNVKWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPT-QGGSSVGTRHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQN-VDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFAA 399          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A1Z9J471 (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT)

HSP 1 Score: 160 bits (406), Expect = 8.460e-43
Identity = 105/328 (32.01%), Postives = 165/328 (50.30%), Query Frame = 0
Query:   52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDI---------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA--LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQE 359
            V ED  G RLDR++K   PGL  G + + +R  +++++G   ++ +  +    V   P +          R PA   S ++ ++++  +L++D  V V++KP GL V      +++R L+ +L  L  G   R  LVHRL     G +++AR   A  LL++ FR++   +VYW +V GVPR   G I++               D  GK A++ YRV++      +WL LEP TGR +Q+ +HCA  LGTP++GD  Y          D+ A  L L +R+I  P                +  ++ V APLP HMK TW+ LG +E
Sbjct:    9 VEEDAEGMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDGGRAKSNSRLISGQSVRMPPLNADTA-NPSADRAPAR-ASKADKLMLESAILHQDHHVLVIDKPAGLAVQGG--SKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIP--------------NPSGGMLVVSAPLPDHMKKTWKLLGFEE 317          
BLAST of Ggra9988.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426 (RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426)

HSP 1 Score: 159 bits (401), Expect = 6.400e-42
Identity = 114/340 (33.53%), Postives = 165/340 (48.53%), Query Frame = 0
Query:   42 PCATQPARFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGK-------------------KAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQ---EAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356
            P AT      VA + + TRLDR+ + + P L  G + + +R  +++V+G       T + A   I  P   +       +RPP   VS  EA L+++ +LYRDA V VLNKP GL V   P    +R L+ +L  L  G   R  LVHRL     G +++AR   A   L+  FR R V ++YW +  G P    G ID+ +  +                   +AVT YRV+       +WLEL P TGR +Q+ +HCA GLGTP++GD  Y  +    E   P+    L L +R++  P       P+          ++ V APLPPHM++T+  LG
Sbjct:   13 PAATAIQHRSVAPEEADTRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGK-RAEAGTRLLAGQQIRIPPLPEGPALEAPRRPP-RPVSPEEARLLERMVLYRDASVIVLNKPHGLAVQGGPGL--TRHLDAMLDALRFGQEERPRLVHRLDRDTSGVLVLARSAAAAAKLAAAFRGRDVEKIYWAVAVGRPAPAAGRIDLPLARQSGPRGERTAPAEPGADKAARAVTDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCAQGLGTPILGDGKYGGAAAMIEGLPPL----LHLHARALRLPH------PEG--------GVLEVAAPLPPHMEETFAFLG 330          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A8J2ZBU1 (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT)

HSP 1 Score: 152 bits (385), Expect = 1.360e-39
Identity = 108/323 (33.44%), Postives = 159/323 (49.23%), Query Frame = 0
Query:   52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDI---------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356
            VA + +  RLDR+ + + P L  G + + +R  +V+V+G      +T +R    I  P  +  G     +R     VS  +A L+++ +LYRD  V  LNKP GL V   P    +R L+ +L  L  G   R  LVHRL     G +++AR   A + L+  FR R   + YW +V G P  + G ID+ +               GG +A+T YRV+       +WLEL P TGR +Q+ +HCA GLGTP++GD  Y  +  AQ       L L +R++  P       P+          ++ V APLPPHM+ T+  LG
Sbjct:   26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPGL--TRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAA-AQIEGLPPLLHLHARALRLPH------PEG--------GMLEVAAPLPPHMEQTFAFLG 329          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A4R3J801 (Pseudouridine synthase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J801_9PROT)

HSP 1 Score: 151 bits (381), Expect = 4.220e-39
Identity = 107/337 (31.75%), Postives = 165/337 (48.96%), Query Frame = 0
Query:   52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFP----GDVKLGLTRRK---KRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTL---EQLLCGL--GTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA-LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQE 359
            V  D +  RLDR++K    G+  G I + +R  +++V+G   ++    ++A   +  P    G+  +G + R    + P A DV       ++  +LY+D ++ VLNKP GL V     Q  + T+   + +L GL  G  R  L HRL     G +++AR  G    L+  FR R V ++YW +V GVP   +G+ID+ +G                G+KA + YR++       +W+ +EP TGR +Q+ +H A G+GTP++GD  Y         +  G  L L +RSI F R     SP R            + APLP HM+ TWR LG +E
Sbjct:    9 VDADDADVRLDRWLKRRFTGITQGRIQKLLRTGQIRVDGKRLKDAGFRLQAGQTVRVPPLSAGEKGVGPSVRPSTAREPHAEDVQA-----LRDCVLYKDDKIIVLNKPAGLAV-----QGGTGTVLHVDAMLDGLRFGADRPRLTHRLDKDTSGVLVLARTQGEAARLTALFRERKVHKLYWAIVVGVPSPDQGMIDLALGKIPGKGGEKVVPEASRGRKAQSLYRIIDRAGRKAAWVAMEPLTGRTHQLRVHMAQGVGTPILGDGKYGGQGAFLEGLAGGRKLHLHARSIAFARSDG--SPLR------------ISAPLPEHMRATWRFLGFEE 321          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A849HRI3 (Pseudouridine synthase n=1 Tax=Acidocella sp. TaxID=50710 RepID=A0A849HRI3_9PROT)

HSP 1 Score: 147 bits (372), Expect = 6.700e-38
Identity = 118/337 (35.01%), Postives = 167/337 (49.55%), Query Frame = 0
Query:   50 FKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGA-VERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQ---WLLYRDARVAVLNKPPGLPVLDSPHQESSRT--LEQLLCGL---GTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIID-----IDIGGK--------------KAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA--LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356
            F+V E  + TRLDRF++ N  GL    I + +R  +++VNGA  E N  T +   D ++ P      +T  K+ P    V   +  +I+     +LYRD  V VLNKP GL    +    S  T  L+ +L  L   GT R  LVHRL     G +++AR V   + L+  FR R V + YW LV GVP   +G ID     +++GG               KAVT YRVV+     ++W+EL+P+TGR +Q+  H    LGTP++GD +Y      Q   D  A  L L +R + FP     H              +TV+APLP HM+D++  LG
Sbjct:    5 FEVPEAETNTRLDRFLRRNIEGLTQAHIQKFLRAGKIRVNGAKAEAN--TRLALGDSVTAPE-----ITPPKEMPKVRQVMTMDPHMIRDLEAMILYRDDSVIVLNKPAGL----ASQGGSGITVHLDGMLDALRFEGTERPKLVHRLDRDTSGVLLLARGVKPASKLATAFRGRDVEKTYWALVWGVPDVLEGRIDLPLVRVEVGGMSRSEPANRKDPEALKAVTAYRVVEYAGKKFAWMELQPQTGRMHQLRAHML-ALGTPILGDAAY-----GQAFADGFAPQLHLHARRLQFP-----HPDG---------GTLTVEAPLPKHMRDSFSHLG 310          
BLAST of Ggra9988.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87 (RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87)

HSP 1 Score: 148 bits (373), Expect = 6.920e-38
Identity = 102/326 (31.29%), Postives = 160/326 (49.08%), Query Frame = 0
Query:   52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG------------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356
            VA + +  RLDR+ + + P L  G + + +R  +++V+G      AT +     +  P   +     R  RPP   VS  +A  +++ +++RD  V  L+KP G+PV   P    +R+L+ LL  L  G   R  LVHRL     G +++AR   A   L+  FR R V + YW +V G P  ++G IDI +                   G  A+T +R +       +WLEL+P TGR +Q+ +HCA+GLG P++GD  Y  +      +  GAL L +R++  P       P+          ++ V APLPPHM++T+   G
Sbjct:    8 VAAEEAEMRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGR-RAEAATRLAPGQEVRIPPLPEGPAPERPARPP---VSEQDARALERLVIHRDDSVIALDKPHGMPVQGGPG--ITRSLDALLDALRFGHAERPRLVHRLDRDTSGVLLLARTPAAAAALARAFRGRDVEKTYWAVVVGEPTPREGRIDIALARLGGPHGERTQAVDDPKQGAHAITDFRTLDAARRRAAWLELKPLTGRTHQLRVHCAEGLGCPILGDGKYGGAAAHLEGLP-GALHLHARALRLPH------PEG--------GMLEVAAPLPPHMRETFAFFG 312          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A7C7PJE5 (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PJE5_9PROT)

HSP 1 Score: 148 bits (373), Expect = 8.090e-38
Identity = 102/322 (31.68%), Postives = 154/322 (47.83%), Query Frame = 0
Query:   57 SGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRG---ALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356
            +G RLDR+ +   P +  G + + +R+  V+++G   R+ A+ + A  ++  P        R    P    +S +EA  +K  +LY D  V   +KP GL V     Q  SR L+ +L  L  G   R  LVHRL     G +++AR   +   L+  FRA+   ++YW L++GVPR K+G+ID+ +                 GK A T +R+VQ   +  +W+ L P TGR +Q+ +HCA  LGTP+VGD  Y     A  P   G    L L +R +  P               +    + V A LPPHM ++W  LG
Sbjct:   14 AGQRLDRWFRQRFPQVTQGRLEKWLRKGEVRLDGKRARS-ASRIEAGQIVRIPPLPAADSARPPSSPKRQKLSAAEAAELKARVLYSDDTVIAFDKPAGLAVQGGSGQ--SRHLDGMLEALKLGAAERPRLVHRLDKDTAGVLLLARTAASARDLTAAFRAKTTQKIYWALLSGVPRQKRGLIDLPLAKRQTGAGEAMAPAEEEGKPAQTLFRIVQTYKDRLAWVVLMPLTGRTHQLRVHCA-ALGTPIVGDGKYGG--RAAFPDKPGLPKTLHLLARELALPH-------------PEDGTTLRVVAALPPHMAESWEVLG 316          
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A2D6JXS4 (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6JXS4_9PROT)

HSP 1 Score: 146 bits (369), Expect = 1.830e-37
Identity = 109/339 (32.15%), Postives = 166/339 (48.97%), Query Frame = 0
Query:   51 KVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLT-----RRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDI----------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA-LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQERFAAD 364
            KV +D +G R+DR+ K   PGL    + + +R  +V+V+G   +  A  ++A   +  P    LGL      RRK R     +S ++   +K  +L+RD  V V++KPPGL V         + L+ LL  L  G   R  L HRL     G +++AR+  A   L+  FR+R   ++YW +VAGVPR  +GIID+ +                GGK+A+TRYRV+       +W+  EP TGR +Q+ +H A  + TP++GD  Y   +      D    L L ++++  P                A  ++ V APLP HM+ T+R LG  +R   D
Sbjct:    8 KVRDDEAGMRVDRWFKRRFPGLGHARVQKWLRTGQVRVDGGRVKAGAR-LQAGQQVRVP---PLGLPAPQPGRRKPR-----ISKADDRDLKARVLHRDDDVLVIDKPPGLAVQGG--SGLGKHLDALLEALRFGARERPRLAHRLDKDTSGVLVLARNGAAARKLTAAFRSRQARKLYWAVVAGVPRPPEGIIDLALAKRLGRGGEKVGAGVAGGKRALTRYRVIDRAGRQAAWVAFEPETGRTHQLRVHAA-AVETPILGDGKYGGREAFIAGQDTSRRLHLHAKALRIPH--------------PAGGILEVSAPLPDHMRATFRTLGFDDRAEKD 320          
The following BLAST results are available for this feature:
BLAST of Ggra9988.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMI27.380e-17472.89Ribosomal large subunit pseudouridine synthase C n... [more]
R7QAD71.850e-10249.72S4 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1Z9J4718.460e-4332.01Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F4266.400e-4233.53RluA family pseudouridine synthase n=1 Tax=Caldova... [more]
A0A8J2ZBU11.360e-3933.44Pseudouridine synthase n=2 Tax=Caldovatus sedimini... [more]
A0A4R3J8014.220e-3931.75Pseudouridine synthase n=1 Tax=Varunaivibrio sulfu... [more]
A0A849HRI36.700e-3835.01Pseudouridine synthase n=1 Tax=Acidocella sp. TaxI... [more]
RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F876.920e-3831.29RluA family pseudouridine synthase n=1 Tax=Crenalk... [more]
A0A7C7PJE58.090e-3831.68Pseudouridine synthase n=1 Tax=Kiloniellaceae bact... [more]
A0A2D6JXS41.830e-3732.15Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 59..125
e-value: 2.7E-4
score: 30.3
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 60..110
e-value: 6.46929E-6
score: 41.4662
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 147..279
e-value: 3.9E-18
score: 66.1
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 147..316
e-value: 2.42257E-36
score: 128.609
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 131..327
e-value: 5.3E-36
score: 126.2
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 63..360
NoneNo IPR availablePANTHERPTHR21600:SF34MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE RPUSD4coord: 63..360
NoneNo IPR availablePROSITEPS50889S4coord: 59..123
score: 11.667327
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 59..110
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 47..111
e-value: 3.3E-9
score: 38.1
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 141..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:116894..117991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9988.t1Ggra9988.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 116894..117991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9988.t1 ID=Ggra9988.t1|Name=Ggra9988.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MTIFATRVCPYLSVRALARRAFSSKPFPSSPDVSSPRSLELPCATQPARF
KVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTV
RANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVL
NKPPGLPVLDSPHQESSRTLEQLLCGLGTGRYWLVHRLHTMAGGAIMVAR
DVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGKKAVTRYR
VVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQH
PVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKD
TWRRLGMQERFAADS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf
IPR020103PsdUridine_synth_cat_dom_sf