Ggra9988.t1 (polypeptide) Gracilaria gracilis GNS1m male
Overview
Homology
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A2V3IMI2 (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR) HSP 1 Score: 496 bits (1278), Expect = 7.380e-174 Identity = 242/332 (72.89%), Postives = 279/332 (84.04%), Query Frame = 0 Query: 34 SSPRSLELPCATQPARFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQERFAADS 365 SS S LPCATQPARF+V+ L RLDRFIK +APGLPPGLIHRHIRQSRV +NG VER+RAT VR DVI+FPG VKLGLTRRKKRPP +DVSLSEAML++ WLL+RDAR AVLNKPPGLPV+ + +SRTLEQLLC LG+GRYWLVHRL T GGA++VARDVGA TLL+DYFR RMVTR+YWGLVAGVPR KKGIIDIDI G+KA+T+YRVVQMVD+HY+WLE EPRTGR+NQ+S HCA+GLGTPLVGD Y + Q+ QHP+ GALQLCSRSITFPRLTQ + + +K A +L+TV APLP HMKDTW+RLG+QERFA+ S Sbjct: 28 SSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPIT-GALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFASYS 358
BLAST of Ggra9988.t1 vs. uniprot
Match: R7QAD7 (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR) HSP 1 Score: 317 bits (811), Expect = 1.850e-102 Identity = 176/354 (49.72%), Postives = 224/354 (63.28%), Query Frame = 0 Query: 33 VSSPRSLELPCATQPA------RFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQ----EAQHPVDRGALQLC-------SRSITFPRLTQIHSP--KRQKRK----GKAPNLVTVQAPLPPHMKDTWRRLGMQERFAA 363 +SSPR P A A +++V G+RLDRFIK APG+PPGLI R IR+ + V A VR DV++FPG +KLGL+R K++P +D+SL+E+ ++K W+L+RDAR VLNKP GLP +R LE LL G+G GRYWLVHRL GGAI+VARDVGA LL+++FR R+V + YW LV G + K G ID+ I GK+A T YRV+Q +D + WLEL PRTGR +Q+ IHCADGLGTP+VGD Y + + Q+ VD G L L SR I FP+LTQ S KR KR G +T +APLPPHMKDTW+R G++E FAA Sbjct: 48 LSSPRHSPQPPAPTIAPNVKNVKWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPT-QGGSSVGTRHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQN-VDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFAA 399
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A1Z9J471 (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT) HSP 1 Score: 160 bits (406), Expect = 8.460e-43 Identity = 105/328 (32.01%), Postives = 165/328 (50.30%), Query Frame = 0 Query: 52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDI---------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA--LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQE 359 V ED G RLDR++K PGL G + + +R +++++G ++ + + V P + R PA S ++ ++++ +L++D V V++KP GL V +++R L+ +L L G R LVHRL G +++AR A LL++ FR++ +VYW +V GVPR G I++ D GK A++ YRV++ +WL LEP TGR +Q+ +HCA LGTP++GD Y D+ A L L +R+I P + ++ V APLP HMK TW+ LG +E Sbjct: 9 VEEDAEGMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDGGRAKSNSRLISGQSVRMPPLNADTA-NPSADRAPAR-ASKADKLMLESAILHQDHHVLVIDKPAGLAVQGG--SKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIP--------------NPSGGMLVVSAPLPDHMKKTWKLLGFEE 317
BLAST of Ggra9988.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426 (RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426) HSP 1 Score: 159 bits (401), Expect = 6.400e-42 Identity = 114/340 (33.53%), Postives = 165/340 (48.53%), Query Frame = 0 Query: 42 PCATQPARFKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIGGK-------------------KAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQ---EAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356 P AT VA + + TRLDR+ + + P L G + + +R +++V+G T + A I P + +RPP VS EA L+++ +LYRDA V VLNKP GL V P +R L+ +L L G R LVHRL G +++AR A L+ FR R V ++YW + G P G ID+ + + +AVT YRV+ +WLEL P TGR +Q+ +HCA GLGTP++GD Y + E P+ L L +R++ P P+ ++ V APLPPHM++T+ LG Sbjct: 13 PAATAIQHRSVAPEEADTRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGK-RAEAGTRLLAGQQIRIPPLPEGPALEAPRRPP-RPVSPEEARLLERMVLYRDASVIVLNKPHGLAVQGGPGL--TRHLDAMLDALRFGQEERPRLVHRLDRDTSGVLVLARSAAAAAKLAAAFRGRDVEKIYWAVAVGRPAPAAGRIDLPLARQSGPRGERTAPAEPGADKAARAVTDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCAQGLGTPILGDGKYGGAAAMIEGLPPL----LHLHARALRLPH------PEG--------GVLEVAAPLPPHMEETFAFLG 330
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A8J2ZBU1 (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT) HSP 1 Score: 152 bits (385), Expect = 1.360e-39 Identity = 108/323 (33.44%), Postives = 159/323 (49.23%), Query Frame = 0 Query: 52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDI---------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356 VA + + RLDR+ + + P L G + + +R +V+V+G +T +R I P + G +R VS +A L+++ +LYRD V LNKP GL V P +R L+ +L L G R LVHRL G +++AR A + L+ FR R + YW +V G P + G ID+ + GG +A+T YRV+ +WLEL P TGR +Q+ +HCA GLGTP++GD Y + AQ L L +R++ P P+ ++ V APLPPHM+ T+ LG Sbjct: 26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPGL--TRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAA-AQIEGLPPLLHLHARALRLPH------PEG--------GMLEVAAPLPPHMEQTFAFLG 329
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A4R3J801 (Pseudouridine synthase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J801_9PROT) HSP 1 Score: 151 bits (381), Expect = 4.220e-39 Identity = 107/337 (31.75%), Postives = 165/337 (48.96%), Query Frame = 0 Query: 52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFP----GDVKLGLTRRK---KRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTL---EQLLCGL--GTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA-LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQE 359 V D + RLDR++K G+ G I + +R +++V+G ++ ++A + P G+ +G + R + P A DV ++ +LY+D ++ VLNKP GL V Q + T+ + +L GL G R L HRL G +++AR G L+ FR R V ++YW +V GVP +G+ID+ +G G+KA + YR++ +W+ +EP TGR +Q+ +H A G+GTP++GD Y + G L L +RSI F R SP R + APLP HM+ TWR LG +E Sbjct: 9 VDADDADVRLDRWLKRRFTGITQGRIQKLLRTGQIRVDGKRLKDAGFRLQAGQTVRVPPLSAGEKGVGPSVRPSTAREPHAEDVQA-----LRDCVLYKDDKIIVLNKPAGLAV-----QGGTGTVLHVDAMLDGLRFGADRPRLTHRLDKDTSGVLVLARTQGEAARLTALFRERKVHKLYWAIVVGVPSPDQGMIDLALGKIPGKGGEKVVPEASRGRKAQSLYRIIDRAGRKAAWVAMEPLTGRTHQLRVHMAQGVGTPILGDGKYGGQGAFLEGLAGGRKLHLHARSIAFARSDG--SPLR------------ISAPLPEHMRATWRFLGFEE 321
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A849HRI3 (Pseudouridine synthase n=1 Tax=Acidocella sp. TaxID=50710 RepID=A0A849HRI3_9PROT) HSP 1 Score: 147 bits (372), Expect = 6.700e-38 Identity = 118/337 (35.01%), Postives = 167/337 (49.55%), Query Frame = 0 Query: 50 FKVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGA-VERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQ---WLLYRDARVAVLNKPPGLPVLDSPHQESSRT--LEQLLCGL---GTGRYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIID-----IDIGGK--------------KAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA--LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356 F+V E + TRLDRF++ N GL I + +R +++VNGA E N T + D ++ P +T K+ P V + +I+ +LYRD V VLNKP GL + S T L+ +L L GT R LVHRL G +++AR V + L+ FR R V + YW LV GVP +G ID +++GG KAVT YRVV+ ++W+EL+P+TGR +Q+ H LGTP++GD +Y Q D A L L +R + FP H +TV+APLP HM+D++ LG Sbjct: 5 FEVPEAETNTRLDRFLRRNIEGLTQAHIQKFLRAGKIRVNGAKAEAN--TRLALGDSVTAPE-----ITPPKEMPKVRQVMTMDPHMIRDLEAMILYRDDSVIVLNKPAGL----ASQGGSGITVHLDGMLDALRFEGTERPKLVHRLDRDTSGVLLLARGVKPASKLATAFRGRDVEKTYWALVWGVPDVLEGRIDLPLVRVEVGGMSRSEPANRKDPEALKAVTAYRVVEYAGKKFAWMELQPQTGRMHQLRAHML-ALGTPILGDAAY-----GQAFADGFAPQLHLHARRLQFP-----HPDG---------GTLTVEAPLPKHMRDSFSHLG 310
BLAST of Ggra9988.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87 (RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87) HSP 1 Score: 148 bits (373), Expect = 6.920e-38 Identity = 102/326 (31.29%), Postives = 160/326 (49.08%), Query Frame = 0 Query: 52 VAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG------------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356 VA + + RLDR+ + + P L G + + +R +++V+G AT + + P + R RPP VS +A +++ +++RD V L+KP G+PV P +R+L+ LL L G R LVHRL G +++AR A L+ FR R V + YW +V G P ++G IDI + G A+T +R + +WLEL+P TGR +Q+ +HCA+GLG P++GD Y + + GAL L +R++ P P+ ++ V APLPPHM++T+ G Sbjct: 8 VAAEEAEMRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGR-RAEAATRLAPGQEVRIPPLPEGPAPERPARPP---VSEQDARALERLVIHRDDSVIALDKPHGMPVQGGPG--ITRSLDALLDALRFGHAERPRLVHRLDRDTSGVLLLARTPAAAAALARAFRGRDVEKTYWAVVVGEPTPREGRIDIALARLGGPHGERTQAVDDPKQGAHAITDFRTLDAARRRAAWLELKPLTGRTHQLRVHCAEGLGCPILGDGKYGGAAAHLEGLP-GALHLHARALRLPH------PEG--------GMLEVAAPLPPHMRETFAFFG 312
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A7C7PJE5 (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PJE5_9PROT) HSP 1 Score: 148 bits (373), Expect = 8.090e-38 Identity = 102/322 (31.68%), Postives = 154/322 (47.83%), Query Frame = 0 Query: 57 SGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLTRRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRG---ALQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLG 356 +G RLDR+ + P + G + + +R+ V+++G R+ A+ + A ++ P R P +S +EA +K +LY D V +KP GL V Q SR L+ +L L G R LVHRL G +++AR + L+ FRA+ ++YW L++GVPR K+G+ID+ + GK A T +R+VQ + +W+ L P TGR +Q+ +HCA LGTP+VGD Y A P G L L +R + P + + V A LPPHM ++W LG Sbjct: 14 AGQRLDRWFRQRFPQVTQGRLEKWLRKGEVRLDGKRARS-ASRIEAGQIVRIPPLPAADSARPPSSPKRQKLSAAEAAELKARVLYSDDTVIAFDKPAGLAVQGGSGQ--SRHLDGMLEALKLGAAERPRLVHRLDKDTAGVLLLARTAASARDLTAAFRAKTTQKIYWALLSGVPRQKRGLIDLPLAKRQTGAGEAMAPAEEEGKPAQTLFRIVQTYKDRLAWVVLMPLTGRTHQLRVHCA-ALGTPIVGDGKYGG--RAAFPDKPGLPKTLHLLARELALPH-------------PEDGTTLRVVAALPPHMAESWEVLG 316
BLAST of Ggra9988.t1 vs. uniprot
Match: A0A2D6JXS4 (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6JXS4_9PROT) HSP 1 Score: 146 bits (369), Expect = 1.830e-37 Identity = 109/339 (32.15%), Postives = 166/339 (48.97%), Query Frame = 0 Query: 51 KVAEDLSGTRLDRFIKSNAPGLPPGLIHRHIRQSRVKVNGAVERNRATTVRANDVISFPGDVKLGLT-----RRKKRPPANDVSLSEAMLIKQWLLYRDARVAVLNKPPGLPVLDSPHQESSRTLEQLLCGLGTG---RYWLVHRLHTMAGGAIMVARDVGAVTLLSDYFRARMVTRVYWGLVAGVPRSKKGIIDIDI----------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRANQISIHCADGLGTPLVGDVSYDNSQEAQHPVDRGA-LQLCSRSITFPRLTQIHSPKRQKRKGKAPNLVTVQAPLPPHMKDTWRRLGMQERFAAD 364 KV +D +G R+DR+ K PGL + + +R +V+V+G + A ++A + P LGL RRK R +S ++ +K +L+RD V V++KPPGL V + L+ LL L G R L HRL G +++AR+ A L+ FR+R ++YW +VAGVPR +GIID+ + GGK+A+TRYRV+ +W+ EP TGR +Q+ +H A + TP++GD Y + D L L ++++ P A ++ V APLP HM+ T+R LG +R D Sbjct: 8 KVRDDEAGMRVDRWFKRRFPGLGHARVQKWLRTGQVRVDGGRVKAGAR-LQAGQQVRVP---PLGLPAPQPGRRKPR-----ISKADDRDLKARVLHRDDDVLVIDKPPGLAVQGG--SGLGKHLDALLEALRFGARERPRLAHRLDKDTSGVLVLARNGAAARKLTAAFRSRQARKLYWAVVAGVPRPPEGIIDLALAKRLGRGGEKVGAGVAGGKRALTRYRVIDRAGRQAAWVAFEPETGRTHQLRVHAA-AVETPILGDGKYGGREAFIAGQDTSRRLHLHAKALRIPH--------------PAGGILEVSAPLPDHMRATFRTLGFDDRAEKD 320 The following BLAST results are available for this feature:
BLAST of Ggra9988.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9988.t1 ID=Ggra9988.t1|Name=Ggra9988.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bpback to top |