Ggra9982.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9982.t1
Unique NameGgra9982.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length118
Homology
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A2V3IYB6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB6_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 7.200e-37
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 0
Query:   22 ARLNQKTNHQIWRRLRNVRDHCTKHIYTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTAELLDRKRQSS 111
            ARLNQKTNHQ+WRRLR  R  C + I  CDVPQ  +D +NCVLRC+S++CY+ VYSQ PLEEGE+D ARMR FMKCAHT EL   K++ S
Sbjct:   30 ARLNQKTNHQVWRRLRQSRQQCAQSIQICDVPQTADDIENCVLRCMSSQCYNLVYSQHPLEEGEVDDARMRTFMKCAHTEELKQLKQRRS 119          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A7S0G6Y2 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6Y2_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 9.870e-10
Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   16 LVGSVSARLNQKTNHQIWRRLRNVRDHCTKHIYTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKC 97
            +V  V AR   KT+  I R L++    C K      +    E  Q C+L+C S  CY  +Y++ PLE+GEID+AR +AF+KC
Sbjct:   19 MVSLVDARSTSKTS-PIARSLKSKERRCEKSSACYGLRD--EHLQRCILKCASEHCYELIYAKDPLEDGEIDNARSKAFLKC 97          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A7S2YVL0 (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YVL0_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 4.580e-9
Identity = 33/66 (50.00%), Postives = 37/66 (56.06%), Query Frame = 0
Query:   40 RDHCTKHIYTCDVPQ---VGED--NQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHT 100
            RD CTK I   +      VG D   +NCVLRCVS ECY  +Y   PLEEGE+D  R R F  C  T
Sbjct:   75 RDECTKAIQRDEERYAHCVGSDITRENCVLRCVSPECYDKLYGTDPLEEGELDTTRGRLFRNCLKT 140          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A482RSH6 (DUF4787 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH6_9ARCH)

HSP 1 Score: 59.3 bits (142), Expect = 6.320e-9
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   10 LVVLVLLVGSVSARLNQKTNHQIWRRLRNVRDHCTKHIYTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTAELLDRKRQSS 111
            L+ L L+V S +A    K     WR L+ V+  C K   +  VP   E+  NCV +C S +CY+ VY + PLE+GEID+AR RAF+ C      L+++ +++
Sbjct:    8 LLFLCLMVVSEAAPNKDKA----WR-LKKVK--CEKEDCSHLVP---EEAYNCVNKCTSEKCYNEVYKESPLEDGEIDNARNRAFLSCLREEVRLEKREKAN 99          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A0G4GQ10 (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ10_9ALVE)

HSP 1 Score: 58.2 bits (139), Expect = 1.880e-8
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   23 RLNQK------TNH--QIWRRLRN--VRDHCTKHIYTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKC 97
            RL+QK      T+H  ++WR  RN  V + C+      D+P+  E+N +CV +C+S +CY  ++++ PLE GE+D  R   FM C
Sbjct:   19 RLDQKLAQAGATSHTNKVWRARRNKCVMNECS------DIPE--EENDDCVDKCLSPQCYQDIFAENPLEPGEVDRKRRNDFMNC 95          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A3L6SDN8 (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SDN8_PANMI)

HSP 1 Score: 57.0 bits (136), Expect = 8.530e-8
Identity = 30/98 (30.61%), Postives = 53/98 (54.08%), Query Frame = 0
Query:    4 PSALAKLVVLVLLVGSVSARLNQK--TNHQIWRRLRNVRDHCTKHIYTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAH 99
            P+A   L+ L LL  S +A+ +++  ++++I ++           ++         + +NCVLRC+S ECY  +Y   PLEEGE+D+ R + +  C H
Sbjct:   18 PAAYCLLLTLALLFASAAAKSSRRPISDNEIRQKKEACYTDVENGLWGWVCRSSPTEKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMH 115          
BLAST of Ggra9982.t1 vs. uniprot
Match: B4FXD2 (Uncharacterized protein n=10 Tax=Panicoideae TaxID=147369 RepID=B4FXD2_MAIZE)

HSP 1 Score: 56.2 bits (134), Expect = 1.250e-7
Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 0
Query:    4 PSALAKLVV-LVLLVGSVSARLNQKTNHQIWRRLRNVRDHCTKHI------YTCDVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTAEL 103
            PSA   LV+ L LLV S +A+ +++        +R  ++ C   +      + C       + +NCVLRC+S ECY  +Y   PLEEGE+D+ R + +  C H + L
Sbjct:   18 PSACYLLVLTLALLVVSAAAKSSRRPISD--NEIRQKKEACYTDVENGLWGWVCRYSPT--EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMHKSSL 120          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A7S3FNZ8 (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNZ8_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 1.620e-7
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 0
Query:   60 QNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTA 101
            +NCVL CVS ECY  VY+Q PLEEGE+D  R R F  C   A
Sbjct:  112 ENCVLECVSPECYAEVYAQDPLEEGELDTTRGRLFRVCVRNA 153          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A6S9GZX5 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GZX5_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 1.740e-7
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   55 VGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTA 101
            + ++ QNC+ +C+SAECY  VY+ +PLE+GE+D +R + F  C   A
Sbjct:   64 IVDEAQNCINKCISAECYEEVYAHEPLEDGEVDASRYKRFQACYRAA 110          
BLAST of Ggra9982.t1 vs. uniprot
Match: A0A3B6JN73 (Uncharacterized protein n=5 Tax=Triticeae TaxID=147389 RepID=A0A3B6JN73_WHEAT)

HSP 1 Score: 55.8 bits (133), Expect = 1.820e-7
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   58 DNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHTAEL 103
            + +NCVLRC+S ECY+ +Y   PLEEGE+D+ R   +  C H   L
Sbjct:   77 EKENCVLRCLSPECYNLIYGGDPLEEGELDYVRSHEYKYCMHKVSL 122          
The following BLAST results are available for this feature:
BLAST of Ggra9982.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYB67.200e-3765.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0G6Y29.870e-1040.24Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S2YVL04.580e-950.00Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A482RSH66.320e-938.24DUF4787 domain-containing protein n=1 Tax=archaeon... [more]
A0A0G4GQ101.880e-837.65Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A3L6SDN88.530e-830.61Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]
B4FXD21.250e-733.64Uncharacterized protein n=10 Tax=Panicoideae TaxID... [more]
A0A7S3FNZ81.620e-759.52Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A6S9GZX51.740e-744.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3B6JN731.820e-747.83Uncharacterized protein n=5 Tax=Triticeae TaxID=14... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031985Protein of unknown function DUF4787PFAMPF16029DUF4787coord: 35..97
e-value: 2.6E-17
score: 62.7
IPR031985Protein of unknown function DUF4787PANTHERPTHR35455UNNAMED PRODUCTcoord: 11..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:94991..95424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9982.t1Ggra9982.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 94991..95424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9982.t1 ID=Ggra9982.t1|Name=Ggra9982.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=118bp
MSCPSALAKLVVLVLLVGSVSARLNQKTNHQIWRRLRNVRDHCTKHIYTC
DVPQVGEDNQNCVLRCVSAECYHHVYSQQPLEEGEIDHARMRAFMKCAHT
AELLDRKRQSSLQDPQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031985DUF4787