Ggra9981.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9981.t1
Unique NameGgra9981.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A2V3IY70 (Vesicle transport protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY70_9FLOR)

HSP 1 Score: 309 bits (792), Expect = 1.530e-104
Identity = 172/235 (73.19%), Postives = 191/235 (81.28%), Query Frame = 0
Query:    1 MGLLEGLNSLQGAPLPAPSTSNTSNVSNDPLSSFSASAKSLFGDLSNTLAPSLETLNDTAKQSVSSVRRFISDEVPEDEEAPAQMTLSEEINTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV-------------------------------AFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGVMGISFGS 204
            MGLLEGLNSLQG PLPAPSTSNTS+ + DPLSS SASAKSLFGDLS+TLAPSLETLNDTAKQSV+SVRRFISDE   DEEAPAQ+TLSEEINTMFNLT  QR+ LFVMIFGTGVLLI +SF+FLPLI+VVPHKFAASF +GN+LAI+STWVLV                               AFFGGK RY+LVI+A++AEVASL+WYALSYIPYGRHMISRLVG+MG+SFGS
Sbjct:    1 MGLLEGLNSLQGPPLPAPSTSNTSHSATDPLSSLSASAKSLFGDLSHTLAPSLETLNDTAKQSVNSVRRFISDEPEHDEEAPAQVTLSEEINTMFNLTTFQRVGLFVMIFGTGVLLICLSFAFLPLILVVPHKFAASFTMGNILAISSTWVLVGPKAQLQNMFNPVRAAAAGIYLFSLFFALFAAFFGGKFRYVLVIMALVAEVASLVWYALSYIPYGRHMISRLVGMMGVSFGS 235          
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A1X6NU77 (Vesicle transport protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU77_PORUM)

HSP 1 Score: 128 bits (322), Expect = 6.060e-33
Identity = 81/207 (39.13%), Postives = 117/207 (56.52%), Query Frame = 0
Query:   29 DPLSSFSASAKSLFGDLSNTLAPSLETLNDTAKQSVSSVRRFIS--DEVPEDEEAPA-----QMTLSEEINTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV-------------------------------AFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGV 197
            D  S F+A  ++    L    +     +ND  +   ++V R +   D  P D EA A     Q ++ +EI  MFNL+ +QR+ LFVM F  G ++IG+SF FLP+I++ PHKFAA+F  GN+LAI STWV+V                               AFFGG+LRY LV+++++ EV +L+WY+LSYIP+GR  +SRL G+
Sbjct:   70 DAFSQFAAGGQTAADVLGARASEVGTNVNDAFRGGWAAVSRMVGADDGAPIDVEACANGNGGQQSVQQEIGEMFNLSWVQRLTLFVMCFSAGAVMIGLSFMFLPMILLKPHKFAAAFTAGNLLAIMSTWVIVGPRAQLASMFHPARATAAAAYIGSLIFALFAAFFGGRLRYPLVLISLVVEVLALVWYSLSYIPFGRQALSRLTGI 276          
BLAST of Ggra9981.t1 vs. uniprot
Match: R7QLF8 (Vesicle transport protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF8_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 1.020e-14
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
Query:  135 AASFALGNVLAITSTWVLVAFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGVMG 199
            A + A G  LA     +  AFFGGKLRY++V+VA++AE+ SL+WYALSYIPYGRHM+SRL G+ G
Sbjct:  168 ARAVAAGIYLASLFIALFAAFFGGKLRYIIVLVAVVAEICSLVWYALSYIPYGRHMMSRLFGLFG 232          
BLAST of Ggra9981.t1 vs. uniprot
Match: L1J0I0 (Vesicle transport protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J0I0_GUITC)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-10
Identity = 53/162 (32.72%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   59 TAKQSVSSVRRFISDEVPEDEEAPAQMTLSEEINTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV-------------------AFFG----------GKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMI 191
            T  Q   S++  I+ +  E E      T+SE ++    L+  +R+  F +   +G+    +S   LPLIV+ PHKFA +++LGN+L + ST  LV                   A+FG          G   Y+LVI+ +  + A+LIWY+LSYIP+GR+M+
Sbjct:   78 TVSQQAESMKTLITGQQKEPE------TVSEYVDEAMTLSYKKRLIGFGICLLSGIFFTFLSTLMLPLIVIKPHKFAVAYSLGNLLMMLSTIFLVGPKKQCQNMWTGHRAMASIAYFGSMVGTIYAAMGLRIYILVIIFVGIQFAALIWYSLSYIPFGRYML 233          
BLAST of Ggra9981.t1 vs. uniprot
Match: M1VMM8 (Vesicle transport protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMM8_CYAM1)

HSP 1 Score: 64.7 bits (156), Expect = 3.280e-9
Identity = 41/116 (35.34%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  101 QRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV------------------AFFG--------GKLRYL--LVIVAIIAEVASLIWYALSYIPYGR 188
            QR+ LF M+FGTGV++  +S   LP++++ P KFA +F+LG VL ITSTW++V                  A +G          LR+L  L +  ++ ++++L WY L+++P+GR
Sbjct:   79 QRLLLFAMLFGTGVVVSFLSVGMLPMLILRPQKFAFAFSLGQVLLITSTWLVVPLQVQLRALSVTERATAAAMYGIALVLALVTSLRHLALLALCFVLIQLSALAWYLLTFLPFGR 194          
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A7S4GDA4 (Vesicle transport protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GDA4_9EUGL)

HSP 1 Score: 63.5 bits (153), Expect = 3.790e-9
Identity = 44/159 (27.67%), Postives = 79/159 (49.69%), Query Frame = 0
Query:   71 ISDEVPEDEEAPAQMTLSEEINTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV----------------------AFFGGKLRY-------LLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGVMGI 200
            I D+V   E+ P + ++ +++   F L+  QR+A F M  G GV+ + ++ +F P +++VP KFA  F  GN+  + ST  LV                      A   G L         +LV++    ++A+++WY +SYIP+ R ++ R + ++ I
Sbjct:   15 IKDQVGLSEQPPQEASVWDDLGDDFALSKKQRLAGFAMSIGMGVVCLFLAVTFAPAVILVPKKFAFFFTFGNIFLMASTMFLVGPSRQFKSMMEASRWQATVVYFASMSGTLASALWLGSTMLVLIFTCVQLAAMVWYCMSYIPFARTIVKRFLRMLRI 173          
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A7J7IQF7 (Vesicle transport protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQF7_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 6.010e-9
Identity = 44/150 (29.33%), Postives = 83/150 (55.33%), Query Frame = 0
Query:   86 TLSEE----INTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTWVLV------------------AFFGGKLRY----------LLVIVAIIAEVASLIWYALSYIPYGRHMI-SRLVGVMGISF 202
            T+SE     ++ +++ +  QR  LF M+FGTGV++  ++ + LP++++ P KFA +F+LG +L ITSTW++V                  A +G  L            LL +  ++ +++++ WY L+++P+GR  I S +   MG+++
Sbjct:   60 TISERDVWGLDELWHCSRTQRFLLFAMVFGTGVVVSCLAVALLPMLILRPQKFAFAFSLGQILLITSTWLVVPLKVQLRALSVPERAAAAAVYGMALLLALATSMRHLALLALFFMLVQISAIAWYLLTFLPFGRGWIWSWITSSMGMNW 209          
BLAST of Ggra9981.t1 vs. uniprot
Match: E1ZCB7 (Vesicle transport protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZCB7_CHLVA)

HSP 1 Score: 61.2 bits (147), Expect = 2.310e-8
Identity = 50/147 (34.01%), Postives = 71/147 (48.30%), Query Frame = 0
Query:   77 EDEEAPAQMTLSEEINTMFNLTMMQRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITS----------------TWVLVAFFGGKL-----------RYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVG 196
            ED EA  + TL +++N    L   QR   F+   G G+LL  M+    P+ +  P KFA  ++LGNVL+IT                  W+  A +   L             LL IV I+ +  +L+WYALSYIPYG+  + RL+G
Sbjct:   16 EDGEAQQEQTLLQQMNEATTLDRTQRAIGFLTCVGIGLLLSFMA----PMFIFRPTKFAMIYSLGNVLSITMFLMGPATQMARMFDSRRWISTAVYLTSLVLTMVSALVFHSVLLCIVFIVIQFCALVWYALSYIPYGQATLMRLLG 158          
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A5J4YSK3 (Vesicle transport protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSK3_PORPP)

HSP 1 Score: 62.0 bits (149), Expect = 3.350e-8
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  131 PHKFAASFALGNVLAITSTWVLVAFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLV 195
            P +  A++A    +A T   +   F GG LRYL+V+VA+I EV +L+WYALSYIPYGR +IS L+
Sbjct:  172 PVRAYAAYAYCGAIAFT---LFACFNGGSLRYLMVLVALIVEVLALLWYALSYIPYGRQLISSLI 233          
BLAST of Ggra9981.t1 vs. uniprot
Match: A0A7S1TI78 (Vesicle transport protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI78_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 4.190e-8
Identity = 25/45 (55.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:  154 AFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGVM 198
            AFFGG +RYLLV++++I EV +L+WY LSY+PYGR ++ R  G++
Sbjct:  211 AFFGGSMRYLLVLISVIIEVLALVWYTLSYVPYGRDILKRCCGLL 255          
The following BLAST results are available for this feature:
BLAST of Ggra9981.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3IY701.530e-10473.19Vesicle transport protein n=1 Tax=Gracilariopsis c... [more]
A0A1X6NU776.060e-3339.13Vesicle transport protein n=1 Tax=Porphyra umbilic... [more]
R7QLF81.020e-1460.00Vesicle transport protein n=1 Tax=Chondrus crispus... [more]
L1J0I01.130e-1032.72Vesicle transport protein n=1 Tax=Guillardia theta... [more]
M1VMM83.280e-935.34Vesicle transport protein n=1 Tax=Cyanidioschyzon ... [more]
A0A7S4GDA43.790e-927.67Vesicle transport protein n=1 Tax=Eutreptiella gym... [more]
A0A7J7IQF76.010e-929.33Vesicle transport protein n=1 Tax=Cyanidiococcus y... [more]
E1ZCB72.310e-834.01Vesicle transport protein n=1 Tax=Chlorella variab... [more]
A0A5J4YSK33.350e-850.77Vesicle transport protein n=1 Tax=Porphyridium pur... [more]
A0A7S1TI784.190e-855.56Vesicle transport protein n=1 Tax=Compsopogon caer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 69..153
coord: 162..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:94113..94928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9981.t1Ggra9981.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 94113..94928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9981.t1 ID=Ggra9981.t1|Name=Ggra9981.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MGLLEGLNSLQGAPLPAPSTSNTSNVSNDPLSSFSASAKSLFGDLSNTLA
PSLETLNDTAKQSVSSVRRFISDEVPEDEEAPAQMTLSEEINTMFNLTMM
QRIALFVMIFGTGVLLIGMSFSFLPLIVVVPHKFAASFALGNVLAITSTW
VLVAFFGGKLRYLLVIVAIIAEVASLIWYALSYIPYGRHMISRLVGVMGI
SFGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011691Vesicle_transpt_SFT2