Ggra998.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra998.t1
Unique NameGgra998.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length165
Homology
BLAST of Ggra998.t1 vs. uniprot
Match: A0A2V3ICW9 (DUF1775 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW9_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 5.560e-62
Identity = 99/161 (61.49%), Postives = 122/161 (75.78%), Query Frame = 0
Query:    5 KLLIAQFVVLFAAIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKMR-VTVERDTTWRIFINRNLGDDEHVASVTYLGFLPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYLAPYLNVTSGESSGH 164
            KLL A   +  A   AHVKITPAEVPA K+SII LRVSHDCGD+TVGTTNFT ++P+KM+ V+VE DT W+I IN++  D+++V SVT+LGFLPDGFYKLFG+R++ P+  AG+KL+F SYQDCHNQG SLA D I   D  K RY APY+ +     SGH
Sbjct:    4 KLLSACLALCVALAAAHVKITPAEVPANKSSIIQLRVSHDCGDETVGTTNFTFIMPMKMKYVSVELDTAWKILINKDEEDEDYVRSVTFLGFLPDGFYKLFGVRMRFPDLPAGEKLYFKSYQDCHNQGASLAWDQIATDDNPKPRYPAPYVTLVEPTESGH 164          
BLAST of Ggra998.t1 vs. uniprot
Match: A0A2V3ICW4 (DUF1775 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW4_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 2.250e-61
Identity = 100/157 (63.69%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    9 AQFVVLFAAIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKM-RVTVERDTTWRIFINRNLGDDEHVASVTYLGFLPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYLAPYLNVTSGESSGH 164
            A FV+L AA +AHV ITP EVPAGK+SII LRVSHDCGD+T+GTTNFTV++P KM RVTVE DT W I I+++  D+++V SVT+LGFLPDGFYKLF +R++ P+E  GQKL+F SYQDCHNQGTSLA D IP       RY AP++ V +   SGH
Sbjct:   10 ALFVLLSAA-YAHVSITPKEVPAGKSSIIQLRVSHDCGDETIGTTNFTVVLPSKMARVTVELDTAWNILIHKHAQDEDYVQSVTFLGFLPDGFYKLFAMRIRFPDE-VGQKLYFRSYQDCHNQGTSLAWDEIPCDHNPDPRYPAPHVTVVNATESGH 164          
BLAST of Ggra998.t1 vs. uniprot
Match: A0A1X6NT16 (DUF1775 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT16_PORUM)

HSP 1 Score: 82.8 bits (203), Expect = 2.750e-16
Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 0
Query:   16 AAIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKM-RVTVERDTTWRIFINRNLGDD----------EHVASVTYLGFLPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNG--DGTKLRYLAPYLNVTSG 159
            A +  HV I P + P     +  +R+ HDCGD TVGT+N TV +P  +  V  E+   W         D           E + + T++GFLPDG Y+ FGL +K+  +  G  L++ + QDCH        D IP    + T+L + AP + +  G
Sbjct:   83 APVVGHVTINPKKAPTSGHLLFKIRLPHDCGDKTVGTSNITVTLPPGVVSVKQEQVAGWLAIHKMKTLDPPLVSGGRSYTETMETATWVGFLPDGMYREFGLSVKLLPQADGTVLYWKAVQDCHGGEAPRVWDEIPTSPCNATRLAHPAPKVELIEG 239          
BLAST of Ggra998.t1 vs. uniprot
Match: YcnI family protein n=1 Tax=Brevibacterium yomogidense TaxID=946573 RepID=UPI0018E00CD7 (YcnI family protein n=1 Tax=Brevibacterium yomogidense TaxID=946573 RepID=UPI0018E00CD7)

HSP 1 Score: 56.6 bits (135), Expect = 1.230e-6
Identity = 44/153 (28.76%), Postives = 66/153 (43.14%), Query Frame = 0
Query:   20 AHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKM-RVTVERDTTWRIFINRNLGD-----------DEHVASVTYLGF--LPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYLAPYLNVTS 158
            AHV +TP+   AG  +++   + H C  D   TT  ++ IP  +  VT  R+  + +       D            E +A V Y     LPD       L L++PEE AGQ L+FP+ Q C     +         D ++L   AP + VT+
Sbjct:   33 AHVGVTPSNTEAGSYTVLEFGIPHGC--DGSSTTEVSIQIPEGIDAVTPTRNAFYSVNTVEETLDAPAVDSHGEEVSERIAEVVYTAVDPLPDDQRDTLELSLRLPEEAAGQTLYFPTVQTCEGDEAAWVQKPADGQDTSELDMPAPEVVVTA 183          
BLAST of Ggra998.t1 vs. uniprot
Match: YcnI family protein n=1 Tax=Glutamicibacter arilaitensis TaxID=256701 RepID=UPI001868FB9B (YcnI family protein n=1 Tax=Glutamicibacter arilaitensis TaxID=256701 RepID=UPI001868FB9B)

HSP 1 Score: 56.2 bits (134), Expect = 1.830e-6
Identity = 47/163 (28.83%), Postives = 74/163 (45.40%), Query Frame = 0
Query:   16 AAIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKMR-VTVERDTTWRIF---------INRNLGDD--EHVASVTYLGF--LPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYLAPYLNVTSGESSGH 164
            AA  AHV +      AG  S++ + V H C  D   TT   + IP  +  VT  R++ + +          I  + G++  E VA V Y     LP     +F L L++PE+ AG+ L+FP+ Q C    ++         D  +L   +P + VT+   +GH
Sbjct:   31 AAAQAHVTVNADTAAAGAYSVLTVSVPHGC--DGSATTKVAIQIPDGINAVTPTRNSFYTVEKTMEQLDEPITDSHGNEVTERVAEVVYTASTPLPADQRDVFELSLQLPEDAAGETLYFPTVQSCEEGESAWVQIPADGQDPHELELPSPAVEVTAASDAGH 191          
BLAST of Ggra998.t1 vs. uniprot
Match: A0A5C8IFF8 (YcnI family protein n=2 Tax=Homoserinibacter sp. GY 40078 TaxID=2603275 RepID=A0A5C8IFF8_9MICO)

HSP 1 Score: 54.7 bits (130), Expect = 7.380e-6
Identity = 43/162 (26.54%), Postives = 68/162 (41.98%), Query Frame = 0
Query:   17 AIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTVGTTNFTVMIPVKMRV-TVERDTTWRIF---------INRNLGDD--EHVASVTYLGF--LPDGFYKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYLAPYLNVTSGESSGH 164
            A FAH  +      AG  +++     H C  D   TT+FT+ +P  +   + E    W++          I  + G++  E V+ + Y      P+GF   F + L++PE+ AG+ L+FP+ Q C               D  +L   AP L VT      H
Sbjct:   49 AAFAHTTVEATSTAAGSYTVLTFASGHSC--DGSPTTSFTIDLPDGINAASPEILAGWKVEKVMETLDTPITDSHGNELTERVSQIVYTADTPFPEGFRVSFDVSLQLPEDAAGETLYFPTVQQCEEGSNDWIEIPADGQDDEELASPAPALEVTEAVDDEH 208          
The following BLAST results are available for this feature:
BLAST of Ggra998.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ICW95.560e-6261.49DUF1775 domain-containing protein n=1 Tax=Gracilar... [more]
A0A2V3ICW42.250e-6163.69DUF1775 domain-containing protein n=1 Tax=Gracilar... [more]
A0A1X6NT162.750e-1632.48DUF1775 domain-containing protein n=1 Tax=Porphyra... [more]
YcnI family protein n=1 Tax=Brevibacterium yomogidense TaxID=946573 RepID=UPI0018E00CD71.230e-628.76YcnI family protein n=1 Tax=Brevibacterium yomogid... [more]
YcnI family protein n=1 Tax=Glutamicibacter arilaitensis TaxID=256701 RepID=UPI001868FB9B1.830e-628.83YcnI family protein n=1 Tax=Glutamicibacter arilai... [more]
A0A5C8IFF87.380e-626.54YcnI family protein n=2 Tax=Homoserinibacter sp. G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038507YcnI-like superfamilyGENE3D2.60.40.2230coord: 19..164
e-value: 2.0E-18
score: 69.0
IPR012533YcnI-likePFAMPF07987DUF1775coord: 21..155
e-value: 2.0E-12
score: 47.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:109802..110296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra998.t1Ggra998.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 109802..110296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra998.t1 ID=Ggra998.t1|Name=Ggra998.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=165bp
MVCSKLLIAQFVVLFAAIFAHVKITPAEVPAGKTSIILLRVSHDCGDDTV
GTTNFTVMIPVKMRVTVERDTTWRIFINRNLGDDEHVASVTYLGFLPDGF
YKLFGLRLKIPEEFAGQKLFFPSYQDCHNQGTSLASDMIPNGDGTKLRYL
APYLNVTSGESSGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038507YcnI-like_sf
IPR012533YcnI-like