Ggra9951.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9951.t1
Unique NameGgra9951.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length86
Homology
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BLAST of Ggra9951.t1 vs. uniprot
Match: R7QQH7 (Chorein N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH7_CHOCR)

HSP 1 Score: 67.8 bits (164), Expect = 2.420e-11
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:    1 MLQNILFALLQSVASCYAELSPSDVGIGLRGGRLVVNDVQLRADTFNGPQSP 52
            MLQN L +LL S+AS YA+LSP+DVGIG+ GGRLV++DV+LRAD FN    P
Sbjct:    1 MLQNTLSSLLVSLASRYADLSPADVGIGIGGGRLVIDDVKLRADVFNSATLP 52
The following BLAST results are available for this feature:
BLAST of Ggra9951.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QQH72.420e-1165.38Chorein N-terminal domain-containing protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:277153..277410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9951.t1Ggra9951.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 277153..277410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9951.t1 ID=Ggra9951.t1|Name=Ggra9951.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=86bp
MLQNILFALLQSVASCYAELSPSDVGIGLRGGRLVVNDVQLRADTFNGPQ
SPSTSMIAVPSDFASTCHGLHSPPPPSRFTWRTSI*
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