Ggra9765.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9765.t1
Unique NameGgra9765.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Homology
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BLAST of Ggra9765.t1 vs. uniprot
Match: A0A2V3IQG3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG3_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 3.540e-52
Identity = 111/358 (31.01%), Postives = 181/358 (50.56%), Query Frame = 0 
Query:    1 MFIPVRAQIVSLTITFTFVAAEIGALLVARVLNRVFETSVLRRSRNVFIYRHCRRLKLISAAILLSFIGLETFTSSLTSTAFRDVKVEENCLRMLLIDQNNSTSEEEELHADLISFKCLQVNGTLFQQLSGNVSLDSHRASCDTVTLFEFNRFDTASRPLSETRRRCKMQSIPEECPAEGASEQQVVEFEFCAHYLFEDGQLFLPTNLVLRESSDDSVELFPSRIYSNLTAEVISXXXXXXXXXMMKSNIQDEVHFRRKSFTRIVRTRCDFTQSTAEGTDVPSFVLATVIGVWAVFTIAPLIMFIASRKWALIDLSDPVWWARSG----EIPKGTSKRKLNVGIVDSVPRVNWSDSAA 354
            MFIP+RAQIVSL +T  FVA E+  L VA+ +  +FET  L R   + +Y+HC R ++ +A +LLSF+ LET TS+LT T+FRD KV+ +CL+++ I Q +  +   +  ++ I ++CL  N  +F+Q  G VSL+    +C+    + +N      R  S     CK  S           E++ V  E+C  +  E   L++         +++      +++++++T   +           +K +  +E+H R   FT +V T+C F+    EG  VP F+L TV  +W +  +  +   + +RK  LI LSDP +WA        IPK   +   N  I+       W  SA+
Sbjct:    1 MFIPIRAQIVSLVVTLVFVATELCVLWVAKTITVLFETQKLCRKVTIGLYQHCLRRRVTAAVVLLSFLALETLTSTLTQTSFRDEKVQRDCLKLVPITQTSDPNVFHDQRSESILYRCLNFNRDIFEQRLGGVSLEPSDVTCEDQPYYSYNNSQRVRRSTSSATMTCKNISSLN-------LERETVVHEWCVFHEVERDTLYMSAQPFPESEAEEEGSFIVTKVHTDITP-FVPKVVDRYLHFFVKDSETEELHLRGVMFTDLVETQCSFSSGKTEGVTVPDFILVTVAALWLLAILGAIFTKLLTRKKTLIYLSDPFFWANISLEKVTIPKKNIRVDENGDILRDEGEFTWQKSAS 350
The following BLAST results are available for this feature:
BLAST of Ggra9765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQG33.540e-5231.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..357
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 284..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000067_piloncontigtig00000067_pilon:100088..101161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9765.t1Ggra9765.t1Gracilaria gracilis GNS1m malemRNAtig00000067_pilon 100088..101161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9765.t1 ID=Ggra9765.t1|Name=Ggra9765.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MFIPVRAQIVSLTITFTFVAAEIGALLVARVLNRVFETSVLRRSRNVFIY
RHCRRLKLISAAILLSFIGLETFTSSLTSTAFRDVKVEENCLRMLLIDQN
NSTSEEEELHADLISFKCLQVNGTLFQQLSGNVSLDSHRASCDTVTLFEF
NRFDTASRPLSETRRRCKMQSIPEECPAEGASEQQVVEFEFCAHYLFEDG
QLFLPTNLVLRESSDDSVELFPSRIYSNLTAEVISKIVDKVVDEMMKSNI
QDEVHFRRKSFTRIVRTRCDFTQSTAEGTDVPSFVLATVIGVWAVFTIAP
LIMFIASRKWALIDLSDPVWWARSGEIPKGTSKRKLNVGIVDSVPRVNWS
DSAAESV*
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