Ggra9728.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9728.t1
Unique Name	Ggra9728.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	158

Homology

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BLAST of Ggra9728.t1 vs. uniprot
Match: A0A2V3IDL6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDL6_9FLOR)

HSP 1 Score: 213 bits (542), Expect = 2.880e-68
Identity = 114/159 (71.70%), Postives = 127/159 (79.87%), Query Frame = 0

Query:    1 MEPIHDAKLREQAGKVYKAIGLPLPEERTEEQMMRPRSHGGFELTSTFVPTPDAPKLNAVHGPLANRDSHMTLKKDVVGFPMPGAGMEARMRAETQV-ERSAMQVEDDEYEQVADRPYFYPRRERRGSGIKKKRRERKVRNKDKPK-VTSSTMPVEVTT 157
            MEPIHDAKLREQA KVYKAIG+ LP ER++EQ M PRSHGGFEL STFVPTPDAPKLN VHGPLA +D  MTLKK+VVGFP+P AG EARMRAE     R  M V+D+EYE V +RPYFYPRRER+G GI+KKRRERK R K + K +T S M VEV T
Sbjct:   11 MEPIHDAKLREQAEKVYKAIGMDLPGERSKEQKMPPRSHGGFELVSTFVPTPDAPKLNVVHGPLAYKDDKMTLKKEVVGFPIPCAGAEARMRAEIPAARRRTMDVDDEEYEDVTERPYFYPRRERQGVGIRKKRRERKQRVKKRSKPMTGSAMQVEVAT 169

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BLAST of Ggra9728.t1 vs. uniprot
Match: R7QTR0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR0_CHOCR)

HSP 1 Score: 161 bits (408), Expect = 9.400e-48
Identity = 84/144 (58.33%), Postives = 104/144 (72.22%), Query Frame = 0

Query:    1 MEPIHDAKLREQAGKVYKAIGLPLPEERTEEQMMRPRSHGGFELTSTFVPTPDAPKLNAVHGPLANRDSHMTLKKDVVGFPMPGAGMEARMRAETQVERS---AMQVEDDEYEQVADRPYFYPRRERRGSGIKKKRRERKVRNK 141
            MEP HDA+LRE+A KVY+AIGLPLPEERT E+ M+PR HGG EL STFV TP  PKLN VHGP A  D  M + K ++GFP+ GAG  A+MRAE  V +    A+ V++DE+EQV   PYFYPRR R+  GIKK R++++   K
Sbjct:   21 MEPKHDAQLREKAAKVYEAIGLPLPEERTAEERMKPRMHGGSELVSTFVLTPKGPKLNVVHGPNAADDPLMRIPKGIIGFPIVGAGARAKMRAELPVPQKRVRAIDVDEDEFEQVEATPYFYPRRARKSGGIKKGRKQKQKTRK 164

The following BLAST results are available for this feature:

BLAST of Ggra9728.t1 vs. uniprot

BLAST of Ggra9728.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IDL6	2.880e-68	71.70	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QTR0	9.400e-48	58.33	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000813_pilon	contig	tig00000813_pilon:12829..13302 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9728.t1	Ggra9728.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000813_pilon 12829..13302 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9728.t1 ID=Ggra9728.t1|Name=Ggra9728.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=158bp
MEPIHDAKLREQAGKVYKAIGLPLPEERTEEQMMRPRSHGGFELTSTFVP
TPDAPKLNAVHGPLANRDSHMTLKKDVVGFPMPGAGMEARMRAETQVERS
AMQVEDDEYEQVADRPYFYPRRERRGSGIKKKRRERKVRNKDKPKVTSST
MPVEVTT*