Ggra9726.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9726.t1
Unique NameGgra9726.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length393
Homology
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BLAST of Ggra9726.t1 vs. uniprot
Match: A0A2V3IDK2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDK2_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 4.520e-130
Identity = 207/377 (54.91%), Postives = 256/377 (67.90%), Query Frame = 0 
Query:   16 KDDTSLSSGSSGLSLASLPDHLRFNPSDTDHSTDEAQDNVEITQSNHQGGGSQHPSQLPALGVTAPISDILKKEPYVHGSAQENEKNQKESHSAVRESSQPRSESAEQAADYDPVSLPSSPQIYRMAQDRAVFNHLGFYHRFGTEHHPQDLRKAYNFYMDAAKMGSSDALAYLGTAHAYGIGVEKSTFKAHGYLRRGILQGSADAVEAQALYSLAGTLNGQRDQDKFLMLLELGAHMNSPGCLMWTGLCFEIGIGVPPDAHTAKTAYLVAANSVSLLHLVQASFPGVLTARDPWLQLKCALFLLHCIGHPDNLGHAMDCLKQAALLDCKEAQLYLAVCLSEGRWLRKSTELALYWYREAAKGDCGQPIAKRVIERME 392
            KDD SLSS SSGLSLASLP+ + FN    + S D +Q +    + N    G    SQL     T  +   L  +        + EK  +E    +R    P+S+   +    D +    SPQIYRMA +R   + LGF HRFG +   QDL KAYNFY+DAA  G +DALAYL TAH +G+GV+KS   AH  LRRGILQGSADAVE +AL  + GT +G RD D FL LLELG  MN+P CL+W GLCFE+G+GV  D+HTAK AYL AA+S S+ +LVQ  FPGVLTA DPWL LKC LFLLH IGH +NLGHAMDCLKQ+ALL CKEAQ+YL +CLSEG+WL++ TE+ALYW++EAAKG+   PIAK+V+E++E
Sbjct:   10 KDDASLSSNSSGLSLASLPEFIHFNSDLDESSQDMSQHSYTENEHNFLHTGKPDVSQLTKPIPTTKVELELLDD--------QQEKPDREETLTLR----PKSDEEPKEKSDDLIKQLRSPQIYRMAMNRVSLSDLGFNHRFGCQSVSQDLTKAYNFYLDAADTGCTDALAYLATAHIHGLGVDKSLGTAHHLLRRGILQGSADAVEIRALCWMNGTFDGIRDYDTFLQLLELGIAMNAPSCLLWAGLCFELGLGVQTDSHTAKQAYLAAASSNSMTYLVQNCFPGVLTAGDPWLLLKCTLFLLHGIGHSENLGHAMDCLKQSALLGCKEAQVYLGICLSEGKWLQRDTEVALYWFQEAAKGELAHPIAKKVVEQLE 374
The following BLAST results are available for this feature:
BLAST of Ggra9726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDK24.520e-13054.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 182..217
e-value: 0.013
score: 24.7
coord: 149..181
e-value: 7.0
score: 15.0
coord: 255..290
e-value: 46.0
score: 7.9
coord: 344..379
e-value: 0.0013
score: 28.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 345..377
e-value: 1.9E-4
score: 22.0
coord: 182..217
e-value: 0.047
score: 14.4
coord: 260..278
e-value: 210.0
score: 2.8
coord: 151..181
e-value: 8.3
score: 7.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 91..221
e-value: 1.1E-12
score: 50.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 222..392
e-value: 1.9E-20
score: 75.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..74
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 124..377
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 152..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000813_piloncontigtig00000813_pilon:3005..4183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9726.t1Ggra9726.t1Gracilaria gracilis GNS1m malemRNAtig00000813_pilon 3005..4183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9726.t1 ID=Ggra9726.t1|Name=Ggra9726.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=393bp
MEDHPHMQWRKADSVKDDTSLSSGSSGLSLASLPDHLRFNPSDTDHSTDE
AQDNVEITQSNHQGGGSQHPSQLPALGVTAPISDILKKEPYVHGSAQENE
KNQKESHSAVRESSQPRSESAEQAADYDPVSLPSSPQIYRMAQDRAVFNH
LGFYHRFGTEHHPQDLRKAYNFYMDAAKMGSSDALAYLGTAHAYGIGVEK
STFKAHGYLRRGILQGSADAVEAQALYSLAGTLNGQRDQDKFLMLLELGA
HMNSPGCLMWTGLCFEIGIGVPPDAHTAKTAYLVAANSVSLLHLVQASFP
GVLTARDPWLQLKCALFLLHCIGHPDNLGHAMDCLKQAALLDCKEAQLYL
AVCLSEGRWLRKSTELALYWYREAAKGDCGQPIAKRVIERME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf