Ggra9720.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9720.t1
Unique NameGgra9720.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length269
Homology
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A2V3IIW1 (Calcium-activated potassium channel subunit alpha-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIW1_9FLOR)

HSP 1 Score: 446 bits (1147), Expect = 1.660e-142
Identity = 220/268 (82.09%), Postives = 239/268 (89.18%), Query Frame = 0
Query:    1 LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGLSSLADELNPHMGDFEDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPMWA 268
            LRRGLGSFV  EGTDH  ICGNVKWEYL AFVLEFYGDDRN KTKLVIICD+PNWSETVW NFFTSNIQFRD+VTYLEGSCVTRDD IRAQVETSK VFIL NQHNP+ YAEDSETLKRILTIRSYTPNLPIYSMCALRD +LQITF LEQ DE+++ EE  SRR SG+NL SQ MDPS+ D+ G+S+L DE +P++GDFEDE D DDGLLV SYDGSSDLKSEA+CMQEIEMSLLAKNVFCNG+STLLANLILR+  +LKDEDPMWA
Sbjct:  285 LRRGLGSFVKTEGTDHCVICGNVKWEYLKAFVLEFYGDDRNTKTKLVIICDQPNWSETVWNNFFTSNIQFRDHVTYLEGSCVTRDDLIRAQVETSKAVFILCNQHNPNPYAEDSETLKRILTIRSYTPNLPIYSMCALRDSMLQITFALEQTDEQEEGEEGLSRRTSGVNLRSQ-MDPSTSDIIGVSALVDEHSPNLGDFEDEDDXDDGLLVTSYDGSSDLKSEAICMQEIEMSLLAKNVFCNGLSTLLANLILRVNPILKDEDPMWA 551          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A2V3IF85 (BK_channel_a domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF85_9FLOR)

HSP 1 Score: 335 bits (860), Expect = 2.370e-112
Identity = 169/226 (74.78%), Postives = 185/226 (81.86%), Query Frame = 0
Query:   45 KLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGLSSLADELNPHMGDFEDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPM--WA 268
             LV  CD+PNWSETVWINF T+NIQ+RDNVTYLEGSC TRDD I+AQVETS  VFILNNQHNPD YAEDSETLK  LT+RSYTPNLP YSMCA  D+ LQ TF LEQV E+ D E+ +SRR SGMNL  Q MDPSS DMA LSS+ +EL PH+G F+D+ DDDDGLL  SYDG S L SEALCMQEIEMSLLAKN FCNG+STLL NLILR+T MLKDEDPM  WA
Sbjct:    2 NLVTTCDQPNWSETVWINFLTANIQYRDNVTYLEGSCDTRDDLIKAQVETSNAVFILNNQHNPDPYAEDSETLKPFLTLRSYTPNLPTYSMCAYLDYRLQTTFALEQVGEEGDGEKASSRRVSGMNLRLQMMDPSSSDMAKLSSVGEELVPHIGYFQDKDDDDDGLLAISYDGPSHLNSEALCMQEIEMSLLAKNFFCNGLSTLLMNLILRVTPMLKDEDPMRAWA 227          
BLAST of Ggra9720.t1 vs. uniprot
Match: R7QI93 (BK_channel_a domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI93_CHOCR)

HSP 1 Score: 331 bits (848), Expect = 2.390e-101
Identity = 174/279 (62.37%), Postives = 204/279 (73.12%), Query Frame = 0
Query:    1 LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDAEEVTSRRAS---GMNLCSQTMDPSSPDMA--GLSSLADELNPHM--GDFEDEGDDD----DGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPMWA 268
            LRRGLGSFV AE  DH  ICGNVKWEYL +FV EFYGD RNA  KLV+ICD PNW+E  W  FFT++  FR++VTYLEGSCV+RDD  RAQV+ +K VF+LNNQHNPD YAEDSETLKRILTIRSY PNLPIYSMCALRD +LQIT+ LE V E + AEE  SRR S   G++  +Q    S  D+   G   +   L   +  GD+E+         DGL V +YDGSSDLKSEA+CMQE+EMSLLA+NVFCNG+STLLANLILR+    K+ D  W+
Sbjct:   31 LRRGLGSFVKAEDVDHCVICGNVKWEYLKSFVQEFYGDGRNATKKLVVICDNPNWTEETWNKFFTAHPPFRNHVTYLEGSCVSRDDLDRAQVDDAKAVFVLNNQHNPDPYAEDSETLKRILTIRSYAPNLPIYSMCALRDSMLQITYALEHVSESE-AEEGLSRRGSLSAGLSTIAQEGRRSQNDILDDGALRVGSSLGRTLAYGDYEEXXXXXXXXXDGLFVPNYDGSSDLKSEAICMQEVEMSLLAENVFCNGLSTLLANLILRVNPQTKESDQPWS 308          
BLAST of Ggra9720.t1 vs. uniprot
Match: R7QF10 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF10_CHOCR)

HSP 1 Score: 173 bits (439), Expect = 1.730e-45
Identity = 104/307 (33.88%), Postives = 152/307 (49.51%), Query Frame = 0
Query:    1 LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDAEEVTSRRAS-----------------GMNLCSQTMDPSSPDMAGLSSLADE------LNPH-----MGDFEDEGDDDDGLLVA------------SYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPMW 267
            +RRG GS+VN+ GT+H  + G VKWE+L  FV EF  +  N  T+++I+   PNW++  W+ F   N  F  ++ YL+GS +  DD  RA V  ++ VF+L + H  D Y EDS+ LK +LTIR+Y+  +PIY++  L +   Q    +E +D    A ++  R  S                 G        D  SPD++  + +  E        PH       DF    +  DG+ +             S       KSE+LC+QE+E  LLA+NVFCNG+STL+AN  LR+       D  W
Sbjct:  317 MRRGGGSYVNSSGTEHVVVTGRVKWEFLQQFVKEFLAEASNLDTRVIILTSNPNWTDDEWLKFVAHNPFFDHHLMYLDGSALKTDDLNRAHVGAARGVFVLADPHRRDPYKEDSDILKAVLTIRNYSGTVPIYTLNTLHESSFQFGIAMEHLDPL--ANDLFHRIGSVLPYSRTFLDIPQGPLTGQAFERGIQDMRSPDLSARNGIDREDSTVLDTGPHDLYSREEDFGGMANSSDGISIQGGTQRVNSRHSLSKHNGQQRKSESLCVQELETVLLAENVFCNGLSTLIANATLRVAPQSNRNDRPW 621          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A7S1TEX7 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEX7_9RHOD)

HSP 1 Score: 149 bits (375), Expect = 2.720e-38
Identity = 86/244 (35.25%), Postives = 131/244 (53.69%), Query Frame = 0
Query:    1 LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGL--SSLADELNPHMGDFEDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFC 242
            L RG GS     G DH  + GN++W YL  FV EF+ +  N+++++V++ D P WS+  W N+ + N  F+  + ++EG      D  RAQV T+  VFIL N H+PD Y EDS  L+ +L IR+   ++PI S+CAL++ +LQI    ++    +  +E T               PS+  + GL  S++ D+     GD   +G          +  S  + S ALCMQ+IE SL+A+N FC
Sbjct:  244 LTRGRGSLAKPSGIDHVIVTGNLRWPYLKHFVQEFFAEANNSESRIVVLTDNPRWSDDEWDNYMSFNPLFKQ-IVFIEGCPSIAGDLRRAQVATASCVFILCNPHHPDPYLEDSNLLRYVLGIRACNSSVPILSICALKESLLQINLACQESYAWEQPDEETM--------------PSTRILDGLDRSNIFDDN--FGGDRRGDG----------FAHSGKISSHALCMQDIEASLMAENSFC 460          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A7S0BL01 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL01_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 2.260e-37
Identity = 84/267 (31.46%), Postives = 134/267 (50.19%), Query Frame = 0
Query:    3 RGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLE--QVDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGLSSLADELNPHMGDFEDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPMW 267
            RG  S +    +DH  +CG+VKWE L  FV EFY    N  TK+V++C +  WS+ +W    + N  FR+NV Y++GS  T  D  R++ + ++  F+       D   EDS  LKRIL IR Y+ N+PIY++ A  +   Q  F ++    DE+DD     + R S +++  ++           SS+  + N                  + +DG     S ++C++E+EM+L  +N+FCNG S+L+ NL+      +   D  W
Sbjct:  353 RGESSLLMFGDSDHVILCGSVKWEQLLQFVKEFYRGSDNYYTKVVVLCPDGPWSDEMWRKQVSRNETFRNNVVYIDGSVYTDRDMERSRADCARAFFVFATLREKDDSREDSNNLKRILAIREYSSNVPIYALNAHPESSFQFRFAMQPTNTDEEDDF----NMRGSTLSILGRSR----------SSIFGQRNSPRS-------------TSGWDGQRTRTSTSMCLREVEMTLFTENIFCNGFSSLVTNLVCHSESSVSINDKPW 592          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A7S1XAN6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAN6_9RHOD)

HSP 1 Score: 144 bits (364), Expect = 8.950e-37
Identity = 88/273 (32.23%), Postives = 137/273 (50.18%), Query Frame = 0
Query:    1 LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRD--FILQITFDLEQV-DEKDDAEEVTSRRASGMN--LCSQTMDPSSPDMAGLSSLADELNPHMGDFEDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLKDEDPMWA 268
            +RRG G++  +E TDH  + G    + L   + EFY D  NA+T++VI+ ++  W+++ W     +N   R  VT+L+GS     D  RA+   +K VF+L      D Y EDS TLK++LT+R++ P L IY++  L D  F+ QI  D E++ D+  D  +++SR  S     L S+     +PD                                        S ++C+Q+  MSLLA+NVFCNG+STL+ N + +    L  ++P WA
Sbjct:  114 IRRGAGAYAKSEDTDHVVLTGKFHLDTLLLLLNEFYADSSNAQTQVVILSNQVQWTDSQWRAVMIANPLLRSRVTFLDGSAHRMHDLQRARTSNAKAVFVLAENAVWDPYQEDSNTLKQLLTLRAHAPRLQIYALSVLHDSSFLFQIAMDSEEIEDDTRDHRKISSRALSSYRSMLTSRETVSHAPD---------------------------------------NSRSVCIQDFNMSLLAENVFCNGLSTLITNAMGKRPHPLDADEP-WA 346          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A5J4YSF2 (Potassium channel subfamily T member 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSF2_PORPP)

HSP 1 Score: 105 bits (261), Expect = 8.500e-22
Identity = 80/263 (30.42%), Postives = 121/263 (46.01%), Query Frame = 0
Query:    2 RRGLGSFVNAE-GTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQ---VDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGLSSL-ADELNPHMGDFEDEGDDDDGLLVASYDGSSD-----LKSEALCMQEIEMSLLAKNVFCNGISTLLANLIL 254
            R G GS+ NA     H  + G   +  L  FV EF+ D R    +LV++   P W E     F  SN  +     +L GSC+  DD  RA+VET+  V+ L+    PD +A DS  LK +L+IR Y  ++PI+S+ ++     Q     +Q   V    +A+              +  +  +     LS L AD  +       D            YD         L+S ++ +++  ++LLA+N+F NG+STLLANLIL
Sbjct:  338 RFGAGSYRNAAFDARHVVLTGLFTFNSLQEFVREFFIDVRFDGYQLVVLSSVPLWQEDELRAFLASNNMYMHETFFLNGSCLKEDDLQRARVETASAVYFLSIPQAPDPHAVDSNALKALLSIRRYCAHVPIFSLHSVSSSAFQFRVATQQSPHVHVMSEAKXXXXXXXXXXXXXXENNESVAHKGFSLSKLFADARSAATATTLDGATMSATAQALKYDQELAERNPLLRSTSIGVEDFFLTLLAENIFANGMSTLLANLIL 600          
BLAST of Ggra9720.t1 vs. uniprot
Match: R7Q4W4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4W4_CHOCR)

HSP 1 Score: 103 bits (258), Expect = 2.110e-21
Identity = 82/282 (29.08%), Postives = 123/282 (43.62%), Query Frame = 0
Query:    3 RGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDR--NAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHN-PDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLEQVDEKDDA---EEVTSRR--ASGMNLCSQTMDPSSPDMAGL------SSLADELNPHMGDFEDEGDDDDGLLVASYDGSS-DL-KSEALCMQEIEMSLLAKNVFCNGISTLLANLILRLTLMLK-DEDPMW 267
            RG G FV      H  +CGN     L  FV EFY D R  N   K+V++ + P WS+T W      N   +  +T+L+G      D  RA++ ++  VF L +     D   +D  T+  IL +R+   ++PIY+   L    LQ    L             +  S R  AS   L    +     D A          + D +  H    +       G+ V S +G   DL +S  +C+QEI+M+L+A N+  NG++TLL+N+ L +        DP W
Sbjct:  292 RGSGWFVKNPNARHVIVCGNPTLSSLVLFVSEFYSDTRESNMTAKIVVLVENPTWSDTDWFQHIAKNSFLQARLTFLQGCLRNSIDTQRAKLPSADAVFFLTSPSTGEDPSLQDIRTVMNILAVRNARTDIPIYAQTLLEGSNLQTNVALNTATTFSKGTYFRDSKSMRPSASYQGLFHAVLQAEVHDFAKARLKRDSKEVEDAIEHHKKVLQ-------GVGVLSCEGKHVDLERSSLICLQEIQMALIAGNIRVNGLATLLSNMYLDIPAEKPCPNDPSW 566          
BLAST of Ggra9720.t1 vs. uniprot
Match: A0A1X6NQW3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQW3_PORUM)

HSP 1 Score: 83.2 bits (204), Expect = 2.510e-14
Identity = 37/133 (27.82%), Postives = 72/133 (54.14%), Query Frame = 0
Query:    3 RGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIICDEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFILNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSM 135
            RG G+     G  H  + G  +   +  F  EF+    N + K+ ++ ++P WS+  W     +   +R+++T+L GS + RDD  RA+++++   F+L +  + D  A D+  L R L+IR+   ++P+Y++
Sbjct:  170 RGSGALHKRPGAAHVIVGGEPRLPDVALFAKEFFSLATNRRRKICVMVEDPAWSDDDWHRLVRTCTLYRNSLTFLAGSAMRRDDLERARLDSADAYFLLQSSRSTDPQAADTALLMRALSIRNVRADVPVYTV 302          
The following BLAST results are available for this feature:
BLAST of Ggra9720.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IIW11.660e-14282.09Calcium-activated potassium channel subunit alpha-... [more]
A0A2V3IF852.370e-11274.78BK_channel_a domain-containing protein n=1 Tax=Gra... [more]
R7QI932.390e-10162.37BK_channel_a domain-containing protein n=1 Tax=Cho... [more]
R7QF101.730e-4533.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TEX72.720e-3835.25Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S0BL012.260e-3731.46Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S1XAN68.950e-3732.23Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YSF28.500e-2230.42Potassium channel subfamily T member 2 n=1 Tax=Por... [more]
R7Q4W42.110e-2129.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NQW32.510e-1427.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003929Calcium-activated potassium channel BK, alpha subunitPFAMPF03493BK_channel_acoord: 225..254
e-value: 1.2E-7
score: 32.1
NoneNo IPR availableGENE3D3.40.50.720coord: 8..146
e-value: 1.6E-9
score: 39.7
NoneNo IPR availablePANTHERPTHR10027CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINcoord: 6..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000105_piloncontigtig00000105_pilon:124897..125703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9720.t1Ggra9720.t1Gracilaria gracilis GNS1m malemRNAtig00000105_pilon 124897..125703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9720.t1 ID=Ggra9720.t1|Name=Ggra9720.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=269bp
LRRGLGSFVNAEGTDHFFICGNVKWEYLNAFVLEFYGDDRNAKTKLVIIC
DEPNWSETVWINFFTSNIQFRDNVTYLEGSCVTRDDFIRAQVETSKTVFI
LNNQHNPDTYAEDSETLKRILTIRSYTPNLPIYSMCALRDFILQITFDLE
QVDEKDDAEEVTSRRASGMNLCSQTMDPSSPDMAGLSSLADELNPHMGDF
EDEGDDDDGLLVASYDGSSDLKSEALCMQEIEMSLLAKNVFCNGISTLLA
NLILRLTLMLKDEDPMWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003929K_chnl_BK_asu