Ggra9710.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9710.t1
Unique NameGgra9710.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Homology
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BLAST of Ggra9710.t1 vs. uniprot
Match: A0A2V3IYM2 (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYM2_9FLOR)

HSP 1 Score: 151 bits (381), Expect = 1.270e-38
Identity = 98/229 (42.79%), Postives = 135/229 (58.95%), Query Frame = 0 
Query:    1 MNDIQVIHFKFNLNDALQSGKNFRRDLRKLNSPAATDLADLNVLND------------------ETYISESQISLQVATATYNAKFSKLGATLFIPEDA--SHAPDGEETLD--GHDAD--AIATNEVKEPQKKQRPMIIQWREAALAILLEDEKDEAVVDKMGKHLTDSLAGKVIKIETLATRINSIHSLALIISEGLKDIQMARLPFRKKLLHLPGSHAPTEEDISD 205
            M+DIQVIH K+NL+DALQ   N + +LR+       +L  L+ L+                   + Y++E+Q  L   +A YN+K+SKLGAT  IP +A  S   +G E LD  G + D   I T++V     K+R    QW E  +AILLE+ K  A VD+M + LTD L G    + TLATR++S+H+LA +ISE L+++Q  R+ FR KLL LPGS  PTEEDIS+
Sbjct:  866 MDDIQVIHIKYNLHDALQWMNNIQGELRQKKQRKGVELRALDELSKVGSSIQEGHLLQDVSDLKDKYVAEAQAKLHATSAVYNSKYSKLGATPLIPIEAAQSQGAEGSEPLDLDGSEMDETTIGTDKVALATPKRRKT--QWWEIGIAILLEEGKGSAFVDRMIQRLTDPLTGSNSDVRTLATRLHSLHALARVISEELENMQEVRMAFRTKLLELPGSREPTEEDISE 1092
The following BLAST results are available for this feature:
BLAST of Ggra9710.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYM21.270e-3842.79E3 ubiquitin-protein ligase SHPRH n=1 Tax=Gracilar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:543607..544280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9710.t1Ggra9710.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 543607..544280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9710.t1 ID=Ggra9710.t1|Name=Ggra9710.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MNDIQVIHFKFNLNDALQSGKNFRRDLRKLNSPAATDLADLNVLNDETYI
SESQISLQVATATYNAKFSKLGATLFIPEDASHAPDGEETLDGHDADAIA
TNEVKEPQKKQRPMIIQWREAALAILLEDEKDEAVVDKMGKHLTDSLAGK
VIKIETLATRINSIHSLALIISEGLKDIQMARLPFRKKLLHLPGSHAPTE
EDISDP*
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